Factsheet for HORVU1Hr1G089690.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, extracellular, cytosol

Predictor Summary:

mitochondrion 2
cytosol 1
extracellular 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular, mitochondrion
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	cytosol
TargetP:	mitochondrion
YLoc:	extracellular

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU3Hr1G050990.2
HORVU3Hr1G098530.4
HORVU4Hr1G051680.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G25490.1	HORVU4Hr1G051680.1	AT2G27050.1	14675533
AT2G25490.1	HORVU4Hr1G051680.1	AT3G20770.1	14675532
AT2G25490.1	HORVU4Hr1G051680.1	AT3G20770.1	14675533
AT2G25490.1	HORVU3Hr1G050990.2	AT3G28715.1	21798944
AT2G25490.1	HORVU3Hr1G098530.4	AT4G02570.1	14675533
AT5G25350.1	HORVU4Hr1G051680.1	AT3G20770.1	14675532
AT5G25350.1	HORVU4Hr1G051680.1	AT3G20770.1	14675533
AT5G25350.1	HORVU3Hr1G098530.4	AT4G02570.1	14675533

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G000950.4	Barley	plastid	89.1	53.02
HORVU5Hr1G029670.1	Barley	mitochondrion	89.47	46.39
HORVU7Hr1G090240.1	Barley	cytosol	89.85	44.34
TraesCS7B01G278800.1	Wheat	cytosol	88.35	36.32
TraesCS7D01G373800.1	Wheat	cytosol	88.35	36.1
TraesCS7A01G377500.1	Wheat	cytosol	87.59	35.9
EER90022	Sorghum	cytosol, plastid	73.68	31.31
HORVU6Hr1G038430.3	Barley	plastid	69.92	28.48
Os06t0605900-01	Rice	cytosol	65.41	27.75
Zm00001d000408_P001	Maize	cytosol	72.18	25.84
Zm00001d036880_P003	Maize	cytosol	70.68	25.54
PGSC0003DMT400094835	Potato	cytosol	22.56	24.49
GSMUA_Achr6P05220_001	Banana	cytosol	54.14	22.02
PGSC0003DMT400007545	Potato	cytosol	52.26	21.82
Solyc12g009560.1.1	Tomato	cytosol	51.5	21.51
VIT_11s0016g05410.t01	Wine grape	cytosol	53.38	21.42
KRH03688	Soybean	cytosol	51.13	21.28
GSMUA_Achr9P28510_001	Banana	cytosol, nucleus, peroxisome	51.88	21.1
CDX76980	Canola	cytosol	47.37	21.04
CDY35358	Canola	cytosol	49.25	21.03
KRH20255	Soybean	cytosol	50.38	20.97
GSMUA_Achr4P30680_001	Banana	cytosol	51.13	20.86
KRH05167	Soybean	cytosol	47.74	20.82
GSMUA_Achr10P...	Banana	extracellular, plasma membrane, plastid	52.26	20.81
Bra034254.1-P	Field mustard	cytosol	48.5	20.74
AT2G25490.1	Thale cress	plastid	48.5	20.54
PGSC0003DMT400079445	Potato	cytosol, nucleus, peroxisome	48.87	20.25
Solyc07g008250.2.1	Tomato	cytosol, nucleus, peroxisome	48.5	20.12
KRH15886	Soybean	cytosol	48.5	20.03
Bra036542.1-P	Field mustard	cytosol	46.24	19.97
VIT_04s0008g05470.t01	Wine grape	cytosol	50.0	19.94
CDX87090	Canola	cytosol	45.86	19.81
CDY19807	Canola	cytosol	45.86	19.81
Solyc08g060810.2.1	Tomato	plastid	49.25	19.7
KRH62989	Soybean	cytosol	48.12	19.69
KRH52439	Soybean	cytosol, nucleus, peroxisome	46.62	19.44
PGSC0003DMT400040977	Potato	nucleus	48.5	19.28
AT5G25350.1	Thale cress	cytosol	44.74	19.1
KRH61771	Soybean	cytosol	45.49	19.03
CDX80503	Canola	cytosol	43.98	18.84
CDX88173	Canola	cytosol	43.98	18.81
Bra009835.1-P	Field mustard	cytosol	43.61	18.65
KRH04870	Soybean	cytosol	18.8	18.38
GSMUA_Achr2P15920_001	Banana	cytosol, peroxisome, plastid	43.98	17.52
Solyc06g030620.1.1	Tomato	cytosol	13.16	17.41
Solyc06g030610.1.1	Tomato	cytosol	17.67	17.15
Solyc06g049010.1.1	Tomato	plastid	38.35	16.45
PGSC0003DMT400042949	Potato	cytosol	33.08	15.94
HORVU1Hr1G065030.2	Barley	cytosol	16.92	11.87
HORVU3Hr1G091200.4	Barley	cytosol	16.54	10.48
PGSC0003DMT400089433	Potato	mitochondrion	18.05	10.46
HORVU6Hr1G059950.1	Barley	cytosol	15.79	10.07
HORVU4Hr1G014630.1	Barley	cytosol	14.29	9.84
HORVU0Hr1G005070.1	Barley	plastid	19.17	9.14
HORVU5Hr1G050420.1	Barley	plastid	17.29	8.33
HORVU3Hr1G012530.12	Barley	cytosol	9.77	7.41
HORVU5Hr1G047420.2	Barley	cytosol, mitochondrion, plastid	18.42	7.26
HORVU5Hr1G024060.1	Barley	cytosol, plastid	21.8	6.88

Protein Annotations

EnsemblPlants:HORVU1Hr1G089690.1	EnsemblPlantsGene:HORVU1Hr1G089690	Gene3D:3.80.10.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_Cys-con_subtyp	PANTHER:PTHR44327
PANTHER:PTHR44327:SF3	PFAM:PF13516	SMART:SM00367	SUPFAM:SSF52047	UniParc:UPI000B4626F0	UniProt:A0A287GNA0
MapMan:11.5.2.6	MapMan:19.2.2.8.1.4.2	:	:	:	:

Description

No Description!

Coordinates

chrchr1H:+:544590717..544593337

Molecular Weight (calculated)

28462.2 Da

IEP (calculated)

8.615

GRAVY (calculated)

0.388

Length

266 amino acids

Sequence
(BLAST)

001: AHYCFLKNVF RWRVPLVTDV GLTEIAAGCP SLEKLDITGC PLVTNKGLVA VAQGCPALKT LTIESCCDVA NQGLKAIGRC SKLQAVNIKN CAYVGDQGVS
101: GLICSATASL AKVCLQGLSI TDPSLAVIGY YGKAITNLTL TRLSSVGERF FWVMANALGL QKLRCMSITS CPGVTELALV SIAKFCPSLK QLYLRKCSQI
201: SDGLLKDFTE ASKVLENSQI EECNRVTLTG ILSFLLNCSP KFKALSLVKC TGIKDIRITV SYCPSS

Best Arabidopsis Sequence Match ( AT2G25490.1 )
(BLAST)

001: MSQIFSFAGE NDFYRRGAIY PNPKDASLLL SLGSFADVYF PPSKRSRVVA PTIFSAFEKK PVSIDVLPDE CLFEIFRRLS GPQERSACAF VSKQWLTLVS
101: SIRQKEIDVP SKITEDGDDC EGCLSRSLDG KKATDVRLAA IAVGTAGRGG LGKLSIRGSN SAKVSDLGLR SIGRSCPSLG SLSLWNVSTI TDNGLLEIAE
201: GCAQLEKLEL NRCSTITDKG LVAIAKSCPN LTELTLEACS RIGDEGLLAI ARSCSKLKSV SIKNCPLVRD QGIASLLSNT TCSLAKLKLQ MLNVTDVSLA
301: VVGHYGLSIT DLVLAGLSHV SEKGFWVMGN GVGLQKLNSL TITACQGVTD MGLESVGKGC PNMKKAIISK SPLLSDNGLV SFAKASLSLE SLQLEECHRV
401: TQFGFFGSLL NCGEKLKAFS LVNCLSIRDL TTGLPASSHC SALRSLSIRN CPGFGDANLA AIGKLCPQLE DIDLCGLKGI TESGFLHLIQ SSLVKINFSG
501: CSNLTDRVIS AITARNGWTL EVLNIDGCSN ITDASLVSIA ANCQILSDLD ISKCAISDSG IQALASSDKL KLQILSVAGC SMVTDKSLPA IVGLGSTLLG
601: LNLQQCRSIS NSTVDFLVER LYKCDILS

Arabidopsis Description

EBF1EIN3-binding F-box protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SKK0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.