Factsheet for HORVU6Hr1G059950.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G262900.1	Wheat	cytosol	94.72	94.72
TraesCS6D01G216400.1	Wheat	cytosol	94.0	94.0
TraesCS6A01G234100.2	Wheat	cytosol	94.0	94.0
Os02t0636400-01	Rice	cytosol	38.37	80.0
Zm00001d051219_P001	Maize	cytosol	79.62	79.62
KXG30697	Sorghum	cytosol	79.14	78.2
GSMUA_Achr5P19410_001	Banana	cytosol	63.55	62.35
GSMUA_Achr8P13910_001	Banana	mitochondrion	52.04	61.3
AT5G23340.1	Thale cress	cytosol	56.35	58.02
VIT_10s0071g00310.t01	Wine grape	cytosol	56.83	57.38
Bra009671.1-P	Field mustard	cytosol	55.4	57.04
CDX88014	Canola	cytosol	55.16	56.79
CDY46953	Canola	cytosol	55.88	56.69
Bra029367.1-P	Field mustard	cytosol	55.64	56.45
CDY40798	Canola	cytosol	55.64	56.45
PGSC0003DMT400029999	Potato	cytosol	55.16	55.02
Solyc04g008980.2.1	Tomato	cytosol	55.16	54.76
KRG90608	Soybean	cytosol	53.48	53.35
KRH36149	Soybean	cytosol	53.48	53.22
CDY45764	Canola	cytosol, peroxisome, plastid	55.88	39.97
CDY29091	Canola	plastid	15.83	38.15
KRH16153	Soybean	cytosol	22.3	37.5
HORVU3Hr1G012530.12	Barley	cytosol	17.27	20.51
HORVU4Hr1G014630.1	Barley	cytosol	18.7	20.21
HORVU1Hr1G065030.2	Barley	cytosol	17.75	19.53
HORVU3Hr1G091200.4	Barley	cytosol	17.75	17.62
HORVU5Hr1G047420.2	Barley	cytosol, mitochondrion, plastid	26.86	16.59
HORVU7Hr1G090240.1	Barley	cytosol	20.62	15.96
HORVU5Hr1G050420.1	Barley	plastid	21.1	15.94
HORVU1Hr1G089690.1	Barley	cytosol, extracellular, mitochondrion	10.07	15.79
HORVU6Hr1G038430.3	Barley	plastid	24.7	15.77
HORVU5Hr1G024060.1	Barley	cytosol, plastid	31.65	15.66
HORVU0Hr1G005070.1	Barley	plastid	20.86	15.59
HORVU5Hr1G029670.1	Barley	mitochondrion	17.03	13.84
HORVU5Hr1G000950.4	Barley	plastid	13.67	12.75

Protein Annotations

EMBL:AK353873	EnsemblPlants:HORVU6Hr1G059950.1	EnsemblPlantsGene:HORVU6Hr1G059950	Gene3D:3.80.10.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_Cys-con_subtyp
PANTHER:PTHR45191	PFAM:PF13516	SEG:seg	SMART:SM00367	SUPFAM:SSF52047	UniParc:UPI0002004639
UniProt:F2CQH1	MapMan:35.1	:	:	:	:

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2CQH1]

Coordinates

chrchr6H:+:397033641..397037862

Molecular Weight (calculated)

45037.9 Da

IEP (calculated)

7.755

GRAVY (calculated)

0.085

Length

417 amino acids

Sequence
(BLAST)

001: MSASPSEGDE AVINGVLTDD ELRAVLTRLG PESERDAFGL VCRRWLRIQS SERRRLRARA GPSMLRRLAA RFPGILELDL SQSPSRSFYP GVIDDDLNVI
101: AGGFCNLRVL ALQNCKGITD VGMVKLGEGL PCLQTLDVSH CKKLSDKGLK VVASGCRKLR QLHIAGCRLI TDNLLRAMSK SCLNLEELGA AGLNSITDAG
201: ISALADGCHK MKSLDISKCN KVGDPGICKI AEASSSSLVS LKLLDCSKVG NKSIHSLAKF CCNLETLIIG GCQHISDESI EALALACCSR LRILRMDWCL
301: KITDASLRSL LCNCKLLAAI DVGCCDQITD AAFQGMEANL FRSELRVLKI NNCVGLTVLG VSRVIESCKA LEYLDVRSCP QVTRQSCEEA GLQLPGSCKV
401: NFEGSLSESD SSVDRFF

Best Arabidopsis Sequence Match ( AT5G23340.1 )
(BLAST)

001: MSSVCVNEAL TDDELRWVLS RLDSDKDKEV FGLVCKRWLN LQSTDRKKLA ARAGPHMLRR LASRFTQIVE LDLSQSISRS FYPGVTDSDL AVISEGFKFL
101: RVLNLHNCKG ITDTGLASIG RCLSLLQFLD VSYCRKLSDK GLSAVAEGCH DLRALHLAGC RFITDESLKS LSERCRDLEA LGLQGCTNIT DSGLADLVKG
201: CRKIKSLDIN KCSNVGDAGV SSVAKACASS LKTLKLLDCY KVGNESISSL AQFCKNLETL IIGGCRDISD ESIMLLADSC KDSLKNLRMD WCLNISDSSL
301: SCILKQCKNL EALDIGCCEE VTDTAFRDLG SDDVLGLKVL KVSNCTKITV TGIGKLLDKC SSLEYIDVRS LPHVTEVRCS EAGLEFPKCC KVNFSGSLTE
401: PDVLL

Arabidopsis Description

At5g23340/MKD15_20 [Source:UniProtKB/TrEMBL;Acc:Q9FMW7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.