CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG90608	Soybean	cytosol	94.99	95.22
VIT_10s0071g00310.t01	Wine grape	cytosol	70.41	71.43
Bra009671.1-P	Field mustard	cytosol	68.02	70.37
CDX88014	Canola	cytosol	67.78	70.12
PGSC0003DMT400029999	Potato	cytosol	68.97	69.14
AT5G23340.1	Thale cress	cytosol	66.83	69.14
Solyc04g008980.2.1	Tomato	cytosol	67.78	67.62
Bra029367.1-P	Field mustard	cytosol	65.39	66.67
CDY46953	Canola	cytosol	64.92	66.18
CDY40798	Canola	cytosol	64.44	65.69
GSMUA_Achr5P19410_001	Banana	cytosol	58.71	57.88
GSMUA_Achr8P13910_001	Banana	mitochondrion	48.69	57.63
KRH16153	Soybean	cytosol	33.17	56.05
TraesCS6D01G216400.1	Wheat	cytosol	53.94	54.2
TraesCS6B01G262900.1	Wheat	cytosol	53.94	54.2
TraesCS6A01G234100.2	Wheat	cytosol	53.7	53.96
HORVU6Hr1G059950.1	Barley	cytosol	53.22	53.48
Zm00001d051219_P001	Maize	cytosol	52.03	52.28
Os02t0636400-01	Rice	cytosol	24.58	51.5
KXG30697	Sorghum	cytosol	50.12	49.76
CDY45764	Canola	cytosol, peroxisome, plastid	68.26	49.06
CDY29091	Canola	plastid	16.23	39.31
KRH64574	Soybean	cytosol	18.14	23.68
KRH18090	Soybean	cytosol	19.81	22.13
KRH15905	Soybean	cytosol	19.09	21.56
KRH53355	Soybean	cytosol	18.85	21.24
KRH11333	Soybean	cytosol	18.85	20.2
KRH38032	Soybean	cytosol	18.14	20.11
KRH02152	Soybean	cytosol	27.92	20.03
KRH50979	Soybean	cytosol	16.47	19.66
KRH52037	Soybean	cytosol	18.85	19.55
KRH47976	Soybean	cytosol	17.9	19.33
KRH20947	Soybean	cytosol, nucleus, peroxisome	27.92	19.28
KRG96764	Soybean	cytosol	28.4	18.56
KRH68483	Soybean	cytosol	28.16	18.41
KRH76059	Soybean	cytosol, nucleus, peroxisome	29.12	18.18
KRH77049	Soybean	cytosol	22.43	18.01
KRH28425	Soybean	cytosol	22.43	17.87
KRH72766	Soybean	cytosol	22.43	17.47
KRH05167	Soybean	cytosol	25.06	17.21
KRH65525	Soybean	cytosol, peroxisome, plastid	28.64	16.95
KRH17127	Soybean	cytosol	25.78	16.56
KRH15886	Soybean	cytosol	25.3	16.46
KRH03688	Soybean	cytosol	24.82	16.28
KRH04530	Soybean	cytosol	20.76	16.14
KRH57971	Soybean	cytosol	21.48	16.1
KRH61771	Soybean	cytosol	24.34	16.04
KRH15408	Soybean	plastid	21.0	16.03
KRH52439	Soybean	cytosol, nucleus, peroxisome	24.34	15.99
KRH62989	Soybean	cytosol	24.58	15.85
KRH20255	Soybean	cytosol	24.11	15.81
KRH05631	Soybean	plastid	21.0	15.63
KRH04870	Soybean	cytosol	9.07	13.97
KRH61346	Soybean	cytosol	17.42	10.46

Protein Annotations

EMBL:ACUP02006721	EnsemblPlants:KRH36149	EnsemblPlantsGene:GLYMA_10G286600	EntrezGene:100803599	Gene3D:3.80.10.10	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt
InterPro:Leu-rich_rpt_Cys-con_subtyp	PANTHER:PTHR45191	PFAM:PF13516	ProteinID:KRH36149	ProteinID:KRH36149.1	SEG:seg
SMART:SM00367	SUPFAM:SSF52047	UniParc:UPI000233D525	UniProt:K7LM04	MapMan:35.1	:

Description

hypothetical protein

Coordinates

chr10:+:50621082..50627984

Molecular Weight (calculated)

45179.8 Da

IEP (calculated)

6.338

GRAVY (calculated)

0.128

Length

419 amino acids

Sequence
(BLAST)

001: MASNSIDGDA VLGSGLCIND VLRDDELRSI LGRVESEKDK ETFGLVCKRW LRLQSTERKK LAARAGPHML RKMADRFTRL VELDLAQSVS RSFYPGVTDS
101: DLAVIATAFT CLKILNLHNC KGITDAGMKA IGEGLSLLQS LDVSYCRKLT DKGLSAVAKG CCDLRILHMA GCRFVNDGVL EALSKYCRNL EELGLQGCTS
201: ITDNGLINLA SGCRQIRFLD INKCSNVSDV GVSSFSSACS SSLKTLKLLD CYKIGDETIL SIAEFCGNLE TLIIGGCRDV SADAIKSLAT ACGSSLKNLR
301: MDWCLNTSDS SLSCVLSQCR NLEALDIGCC EELTDAAFQL MSNEEPGLSL KILKVSNCPK ITVAGIGIIV GKCTSLQYLD VRSCPHITKA GLDEAGFHFP
401: EFCKINFNGS SISEPVVLL

Best Arabidopsis Sequence Match ( AT5G23340.1 )
(BLAST)

001: MSSVCVNEAL TDDELRWVLS RLDSDKDKEV FGLVCKRWLN LQSTDRKKLA ARAGPHMLRR LASRFTQIVE LDLSQSISRS FYPGVTDSDL AVISEGFKFL
101: RVLNLHNCKG ITDTGLASIG RCLSLLQFLD VSYCRKLSDK GLSAVAEGCH DLRALHLAGC RFITDESLKS LSERCRDLEA LGLQGCTNIT DSGLADLVKG
201: CRKIKSLDIN KCSNVGDAGV SSVAKACASS LKTLKLLDCY KVGNESISSL AQFCKNLETL IIGGCRDISD ESIMLLADSC KDSLKNLRMD WCLNISDSSL
301: SCILKQCKNL EALDIGCCEE VTDTAFRDLG SDDVLGLKVL KVSNCTKITV TGIGKLLDKC SSLEYIDVRS LPHVTEVRCS EAGLEFPKCC KVNFSGSLTE
401: PDVLL

Arabidopsis Description

At5g23340/MKD15_20 [Source:UniProtKB/TrEMBL;Acc:Q9FMW7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.