CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH65525	Soybean	cytosol, peroxisome, plastid	93.89	88.98
VIT_08s0058g00700.t01	Wine grape	cytosol	68.85	69.68
PGSC0003DMT400030966	Potato	cytosol, plasma membrane, plastid	65.72	66.32
Solyc10g076290.1.1	Tomato	cytosol	65.72	65.33
AT5G01720.1	Thale cress	vacuole	62.3	62.86
Bra005669.1-P	Field mustard	cytosol	61.4	61.68
CDY11182	Canola	cytosol, endoplasmic reticulum, nucleus	62.0	61.54
CDX80753	Canola	endoplasmic reticulum	61.1	60.65
GSMUA_Achr10P...	Banana	cytosol, nucleus, peroxisome	60.21	56.58
GSMUA_Achr7P22290_001	Banana	cytosol	59.17	55.45
KRH17127	Soybean	cytosol	53.35	54.91
KRH72766	Soybean	cytosol	42.03	52.42
KXG22793	Sorghum	nucleus	54.1	52.16
Zm00001d044622_P002	Maize	mitochondrion	54.69	52.13
EES07863	Sorghum	nucleus	52.31	50.8
TraesCS5A01G150800.2	Wheat	mitochondrion	51.56	50.73
TraesCS5B01G149400.1	Wheat	mitochondrion	51.12	50.29
HORVU5Hr1G047420.2	Barley	cytosol, mitochondrion, plastid	50.37	50.07
Os12t0108500-01	Rice	cytosol, plasma membrane, plastid	52.01	50.07
Zm00001d005072_P003	Maize	mitochondrion	53.65	49.66
TraesCS5D01G155900.1	Wheat	mitochondrion	51.12	49.49
Os11t0108932-01	Rice	nucleus	21.31	45.83
KRH68483	Soybean	cytosol	40.09	41.97
KRG96764	Soybean	cytosol	39.34	41.19
KRG90608	Soybean	cytosol	18.63	29.9
KRH36149	Soybean	cytosol	18.18	29.12
KRH02152	Soybean	cytosol	23.7	27.23
KRH20947	Soybean	cytosol, nucleus, peroxisome	23.99	26.52
KRH64574	Soybean	cytosol	12.22	25.55
KRH11333	Soybean	cytosol	14.16	24.3
KRH18090	Soybean	cytosol	13.56	24.27
KRH15905	Soybean	cytosol	13.41	24.26
KRH50979	Soybean	cytosol	12.67	24.22
KRH16153	Soybean	cytosol	8.79	23.79
KRH47976	Soybean	cytosol	13.71	23.71
KRH38032	Soybean	cytosol	13.26	23.55
KRH53355	Soybean	cytosol	12.82	23.12
KRH05167	Soybean	cytosol	20.72	22.79
KRH15886	Soybean	cytosol	21.76	22.67
KRH77049	Soybean	cytosol	17.29	22.22
KRH28425	Soybean	cytosol	17.14	21.86
KRH62989	Soybean	cytosol	20.72	21.38
KRH57971	Soybean	cytosol	17.73	21.29
KRH04530	Soybean	cytosol	16.99	21.15
KRH20255	Soybean	cytosol	20.12	21.13
KRH03688	Soybean	cytosol	19.82	20.81
KRH61771	Soybean	cytosol	19.52	20.6
KRH52439	Soybean	cytosol, nucleus, peroxisome	19.52	20.53
KRH52037	Soybean	cytosol	11.92	19.8
KRH15408	Soybean	plastid	15.95	19.49
KRH05631	Soybean	plastid	16.1	19.18
KRH04870	Soybean	cytosol	6.86	16.91
KRH61346	Soybean	cytosol	9.99	9.6

Protein Annotations

EntrezGene:100812083	Gene3D:3.80.10.10	MapMan:35.1	EMBL:ACUP02000553	EnsemblPlantsGene:GLYMA_01G128200	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	UniProt:I1J7K5	InterPro:IPR001611	InterPro:IPR032675	EnsemblPlants:KRH76059
ProteinID:KRH76059	ProteinID:KRH76059.1	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_Cys-con_subtyp	PFAM:PF13516
PANTHER:PTHR44309	PANTHER:PTHR44309:SF3	SMART:SM00367	SUPFAM:SSF52047	UniParc:UPI0002336EAA	SEG:seg

Description

hypothetical protein

Coordinates

chr1:-:44038290..44043738

Molecular Weight (calculated)

73336.1 Da

IEP (calculated)

7.226

GRAVY (calculated)

0.187

Length

671 amino acids

Sequence
(BLAST)

001: MKKQKRSDPQ NDTTNPFEVL TEELMFVILD FLETAAPLDK KSFSLTCKWF YSLEAKHRRL LRPLRAEHLP ALAARYPSVT ELDLSLCPRV GDDALALVAG
101: AYAATLRRLD LSQSRRFTGS GLMSLGARCE YLVELDLSNA TELRDAGVAA VARARNLRRL WLARCKNVTD MGIGCIAVGC RKLRVICLKW CVGIGDLGVD
201: LVAIKCKELT TLDLSYLPIT EKCLPSIFKL QHLEDLVLEG CFGIDDDSLD VDLLKQGCKT LKKLDISGCQ NISHVGLSKL TSISGGLEKL ISADGSPVTL
301: SLADGLNKLS MLQSIVLDGC PVTSEGLRAI GNLCISLREL SLSKCLGVTD EALSFLVSKH KDLRKLDITC CRKITDVSIA SISNSCAGLT SLKMESCTLV
401: PSEAFVLIGE KCHYIEELDL TDNEIDDEGL MSISSCSRLS SLKIGICLNI TDRGLTYVGM HCSKLKELDL YRSTGVDDLG ISAIARGCPG LEMINTSYCT
501: SITDRALITL SKCSNLKTLE IRGCLLVTSI GLAAIAMNCR QLSRLDIKKC YNIDDSGMIA LAHFSQNLRQ INLSYSSVTD VGLLSLANIS CLQSFTVLHL
601: QGLVPGGLAA ALLACGGLTK VKLHLSLRPL LPQLLIRHVE SRGCVFEWRD KEFQAELDPK CWKLQLEDVM L

Best Arabidopsis Sequence Match ( AT5G01720.1 )
(BLAST)

001: MKKVKQIRVL KPFDLLSEEL VFIILDLISP NPSDLKSFSL TCKSFYQLES KHRGSLKPLR SDYLPRILTR YRNTTDLDLT FCPRVTDYAL SVVGCLSGPT
101: LRSLDLSRSG SFSAAGLLRL ALKCVNLVEI DLSNATEMRD ADAAVVAEAR SLERLKLGRC KMLTDMGIGC IAVGCKKLNT VSLKWCVGVG DLGVGLLAVK
201: CKDIRTLDLS YLPITGKCLH DILKLQHLEE LLLEGCFGVD DDSLKSLRHD CKSLKKLDAS SCQNLTHRGL TSLLSGAGYL QRLDLSHCSS VISLDFASSL
301: KKVSALQSIR LDGCSVTPDG LKAIGTLCNS LKEVSLSKCV SVTDEGLSSL VMKLKDLRKL DITCCRKLSR VSITQIANSC PLLVSLKMES CSLVSREAFW
401: LIGQKCRLLE ELDLTDNEID DEGLKSISSC LSLSSLKLGI CLNITDKGLS YIGMGCSNLR ELDLYRSVGI TDVGISTIAQ GCIHLETINI SYCQDITDKS
501: LVSLSKCSLL QTFESRGCPN ITSQGLAAIA VRCKRLAKVD LKKCPSINDA GLLALAHFSQ NLKQINVSDT AVTEVGLLSL ANIGCLQNIA VVNSSGLRPS
601: GVAAALLGCG GLRKAKLHAS LRSLLPLSLI HHLEARGCAF LWKDNTLQAE LDPKYWKQQL EEMAP

Arabidopsis Description

FBL3F-box/LRR-repeat protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWU5]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.