CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

nucleus 2
mitochondrion 2
cytosol 1
plasma membrane 1
extracellular 1
plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH76059	Soybean	cytosol, nucleus, peroxisome	88.98	93.89
VIT_08s0058g00700.t01	Wine grape	cytosol	65.4	69.83
PGSC0003DMT400030966	Potato	cytosol, plasma membrane, plastid	62.85	66.92
Solyc10g076290.1.1	Tomato	cytosol	63.28	66.37
AT5G01720.1	Thale cress	vacuole	59.89	63.76
Bra005669.1-P	Field mustard	cytosol	59.32	62.87
CDY11182	Canola	cytosol, endoplasmic reticulum, nucleus	60.03	62.87
CDX80753	Canola	endoplasmic reticulum	59.18	61.98
GSMUA_Achr10P...	Banana	cytosol, nucleus, peroxisome	57.91	57.42
GSMUA_Achr7P22290_001	Banana	cytosol	56.78	56.15
KRH17127	Soybean	cytosol	50.42	54.75
Zm00001d044622_P002	Maize	mitochondrion	52.26	52.56
KXG22793	Sorghum	nucleus	51.55	52.44
KRH72766	Soybean	cytosol	39.69	52.23
EES07863	Sorghum	nucleus	50.0	51.23
TraesCS5A01G150800.2	Wheat	mitochondrion	49.29	51.17
Os12t0108500-01	Rice	cytosol, plasma membrane, plastid	50.28	51.08
TraesCS5B01G149400.1	Wheat	mitochondrion	48.87	50.73
HORVU5Hr1G047420.2	Barley	cytosol, mitochondrion, plastid	48.16	50.52
TraesCS5D01G155900.1	Wheat	mitochondrion	48.73	49.78
Zm00001d005072_P003	Maize	mitochondrion	50.85	49.66
Os11t0108932-01	Rice	nucleus	20.9	47.44
KRH68483	Soybean	cytosol	39.12	43.21
KRG96764	Soybean	cytosol	38.42	42.43
KRG90608	Soybean	cytosol	17.37	29.43
KRH36149	Soybean	cytosol	16.95	28.64
KRH02152	Soybean	cytosol	23.16	28.08
KRH20947	Soybean	cytosol, nucleus, peroxisome	23.59	27.51
KRH64574	Soybean	cytosol	12.15	26.79
KRH11333	Soybean	cytosol	14.12	25.58
KRH50979	Soybean	cytosol	12.57	25.36
KRH15905	Soybean	cytosol	13.28	25.34
KRH18090	Soybean	cytosol	13.42	25.33
KRH47976	Soybean	cytosol	13.42	24.48
KRH38032	Soybean	cytosol	12.99	24.34
KRH53355	Soybean	cytosol	12.71	24.19
KRH05167	Soybean	cytosol	19.92	23.11
KRH15886	Soybean	cytosol	20.9	22.98
KRH16153	Soybean	cytosol	7.91	22.58
KRH77049	Soybean	cytosol	16.53	22.41
KRH28425	Soybean	cytosol	16.38	22.05
KRH20255	Soybean	cytosol	19.63	21.75
KRH57971	Soybean	cytosol	17.09	21.65
KRH03688	Soybean	cytosol	19.35	21.44
KRH62989	Soybean	cytosol	19.63	21.38
KRH04530	Soybean	cytosol	16.1	21.15
KRH61771	Soybean	cytosol	18.64	20.75
KRH52439	Soybean	cytosol, nucleus, peroxisome	18.64	20.69
KRH52037	Soybean	cytosol	11.3	19.8
KRH15408	Soybean	plastid	15.25	19.67
KRH05631	Soybean	plastid	15.4	19.36
KRH04870	Soybean	cytosol	7.06	18.38
KRH61346	Soybean	cytosol	9.46	9.6

Protein Annotations

EntrezGene:100803617	Gene3D:3.80.10.10	MapMan:35.1	EMBL:ACUP02001365	EnsemblPlantsGene:GLYMA_03G042600	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	UniProt:I1JL30	InterPro:IPR001611	InterPro:IPR032675	EnsemblPlants:KRH65525
ProteinID:KRH65525	ProteinID:KRH65525.1	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_Cys-con_subtyp	PFAM:PF13516
PANTHER:PTHR44309	PANTHER:PTHR44309:SF3	SMART:SM00367	SUPFAM:SSF52047	UniParc:UPI00029587FA	SEG:seg

Description

hypothetical protein

Coordinates

chr3:+:5393167..5398284

Molecular Weight (calculated)

77472.2 Da

IEP (calculated)

7.479

GRAVY (calculated)

0.173

Length

708 amino acids

Sequence
(BLAST)

001: MSRIYSSNIE TKQTNPSLLS PQLFIINLQN DQPNAKRRTM KKQKLSEPQN DTTNPFEVLS EELMFVILDF LQTTSLDKKS FSLTCKLFYS VEAKHRRLLR
101: PLRAEHLPAL AARYPNVTEL DLSLCPRVGD GALGLVAGAY AATLRRMDLS RSRRFTATGL LSLGARCEHL VELDLSNATE LRDAGVAAVA RARNLRKLWL
201: ARCKMVTDMG IGCIAVGCRK LRLLCLKWCV GIGDLGVDLV AIKCKELTTL DLSYLPITEK CLPSIFKLQH LEDLVLEGCF GIDDDSLDVD LLKQGCKTLK
301: RLDISGCQNI SHVGLSKLTS ISGGLEKLIL ADGSPVTLSL ADGLNKLSML QSIVLDGCPV TSEGLRAIGN LCISLRELSL SKCLGVTDEA LSFLVSKHKD
401: LRKLDITCCR KITDVSIASI ANSCTGLTSL KMESCTLVPS EAFVLIGQKC HYLEELDLTD NEIDDEGLMS ISSCSWLTSL KIGICLNITD RGLAYVGMRC
501: SKLKELDLYR STGVDDLGIS AIAGGCPGLE MINTSYCTSI TDRALIALSK CSNLETLEIR GCLLVTSIGL AAIAMNCRQL SRLDIKKCYN IDDSGMIALA
601: HFSQNLRQIN LSYSSVTDVG LLSLANISCL QSFTLLHLQG LVPGGLAAAL LACGGLTKVK LHLSLRSLLP ELLIRHVEAR GCVFEWRDKE FQAELDPKCW
701: KLQLEDVI

Best Arabidopsis Sequence Match ( AT5G01720.1 )
(BLAST)

001: MKKVKQIRVL KPFDLLSEEL VFIILDLISP NPSDLKSFSL TCKSFYQLES KHRGSLKPLR SDYLPRILTR YRNTTDLDLT FCPRVTDYAL SVVGCLSGPT
101: LRSLDLSRSG SFSAAGLLRL ALKCVNLVEI DLSNATEMRD ADAAVVAEAR SLERLKLGRC KMLTDMGIGC IAVGCKKLNT VSLKWCVGVG DLGVGLLAVK
201: CKDIRTLDLS YLPITGKCLH DILKLQHLEE LLLEGCFGVD DDSLKSLRHD CKSLKKLDAS SCQNLTHRGL TSLLSGAGYL QRLDLSHCSS VISLDFASSL
301: KKVSALQSIR LDGCSVTPDG LKAIGTLCNS LKEVSLSKCV SVTDEGLSSL VMKLKDLRKL DITCCRKLSR VSITQIANSC PLLVSLKMES CSLVSREAFW
401: LIGQKCRLLE ELDLTDNEID DEGLKSISSC LSLSSLKLGI CLNITDKGLS YIGMGCSNLR ELDLYRSVGI TDVGISTIAQ GCIHLETINI SYCQDITDKS
501: LVSLSKCSLL QTFESRGCPN ITSQGLAAIA VRCKRLAKVD LKKCPSINDA GLLALAHFSQ NLKQINVSDT AVTEVGLLSL ANIGCLQNIA VVNSSGLRPS
601: GVAAALLGCG GLRKAKLHAS LRSLLPLSLI HHLEARGCAF LWKDNTLQAE LDPKYWKQQL EEMAP

Arabidopsis Description

FBL3F-box/LRR-repeat protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWU5]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.