Factsheet for TraesCS5A01G150800.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 4
cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, plastid, secretory
iPSORT:	mitochondrion
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G149400.1	Wheat	mitochondrion	96.48	96.48
HORVU5Hr1G047420.2	Barley	cytosol, mitochondrion, plastid	94.43	95.41
TraesCS5D01G155900.1	Wheat	mitochondrion	93.99	92.5
Zm00001d044622_P002	Maize	mitochondrion	78.89	76.42
EES07863	Sorghum	nucleus	76.54	75.54
KXG22793	Sorghum	nucleus	76.69	75.14
Os12t0108500-01	Rice	cytosol, plasma membrane, plastid	76.25	74.61
Zm00001d005072_P003	Maize	mitochondrion	75.22	70.76
Os11t0108932-01	Rice	nucleus	32.11	70.19
GSMUA_Achr7P22290_001	Banana	cytosol	58.65	55.87
GSMUA_Achr10P...	Banana	cytosol, nucleus, peroxisome	58.36	55.74
VIT_08s0058g00700.t01	Wine grape	cytosol	51.76	53.24
PGSC0003DMT400030966	Potato	cytosol, plasma membrane, plastid	51.03	52.33
KRH76059	Soybean	cytosol, nucleus, peroxisome	50.73	51.56
Solyc10g076290.1.1	Tomato	cytosol	50.73	51.26
AT5G01720.1	Thale cress	vacuole	48.83	50.08
VIT_06s0004g07520.t01	Wine grape	cytosol	48.39	49.85
Bra005669.1-P	Field mustard	cytosol	48.39	49.4
KRH65525	Soybean	cytosol, peroxisome, plastid	51.17	49.29
KRH17127	Soybean	cytosol	47.07	49.23
CDY11182	Canola	cytosol, endoplasmic reticulum, nucleus	48.53	48.96
CDX80753	Canola	endoplasmic reticulum	48.09	48.52
KRH72766	Soybean	cytosol	36.36	46.1
TraesCS5A01G091800.2	Wheat	cytosol	36.36	37.52
TraesCS6A01G234100.2	Wheat	cytosol	16.72	27.34
TraesCS4A01G142500.3	Wheat	plastid	23.9	25.91
TraesCS3A01G067800.1	Wheat	cytosol	13.05	25.36
TraesCS4A01G230600.2	Wheat	plastid	13.64	22.96
TraesCS1A01G264900.1	Wheat	cytosol	11.73	21.62
TraesCS5A01G161400.1	Wheat	cytosol, plastid	16.13	20.87
TraesCS3A01G407700.1	Wheat	cytosol	11.58	20.79
TraesCS6A01G181900.1	Wheat	cytosol	19.5	20.49
TraesCS7A01G377500.1	Wheat	cytosol	19.5	20.49
TraesCS2A01G359900.1	Wheat	cytosol	15.25	19.22

Protein Annotations

EnsemblPlants:TraesCS5A01G150800.2	EnsemblPlantsGene:TraesCS5A01G150800	Gene3D:3.80.10.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_Cys-con_subtyp	PANTHER:PTHR44309
PANTHER:PTHR44309:SF3	PFAM:PF13516	SEG:seg	SMART:SM00367	SUPFAM:SSF52047	MapMan:35.1

Description

No Description!

Coordinates

chr5A:-:328657463..328660791

Molecular Weight (calculated)

73233.3 Da

IEP (calculated)

8.155

GRAVY (calculated)

0.275

Length

682 amino acids

Sequence
(BLAST)

001: MAMATHGHLA KRRRVCPAAV AVPAAPIDSL ADELLFLVLD RVAAADPRAL KSFALASRAC HAAESRHRRV LRPYRADLLS AALARYPTAA RLDLTLCPRV
101: PAAALAALSS APVPSLRAVD LSRSRGFGAP GLAALLAACP GLADLDLSNG VDLGDAAAAE LARARGLQRF CLSRCKPMTD MGLGCIAVGC PDLRDLTLNW
201: CLGITDLGVQ LLALKCKKLR TLNLSYTMIS KDCLPAIMKL PNLEVLALVG CVGIDDDALS GLENGCSKSL RVLDLSTCRN VTHTGVSSVV KAVPNLLELN
301: LSYCCNVTPS MGKCFQMLPK LQTLKLEGCK FMADGLKYIG ISCVSLRELS LSKCSGVTDT DLSFVVSRLK NLLKLDITCN RNITDVSLAT ITSSCPSLVS
401: LRMESCSHFS SEGLRLIGKR CCHLEELDIT DSDLDDEGLK ALSGCRKLSS LKIGICMRIS DEGLIHIGKS CPELRDIDLY RSGGISDEGV TQIAQGCPML
501: ESINLSYCTE ITDVSLVSLS KCAKLNTLEI RGCPSVSSAG LSEIAIGCRL LAKLDVKKCF AINDVGMLFL SQFSHSLRQI NLSYCSVTDI GLLSLSSICG
601: LQNMTIVHLA GITPNGLMAA LMVSGGLTRV KLHAAFRSMM PPHMLKVVEA RGCAFQWIDK PFKVEQERCD IWQQQSRDVL VR

Best Arabidopsis Sequence Match ( AT5G01720.1 )
(BLAST)

001: MKKVKQIRVL KPFDLLSEEL VFIILDLISP NPSDLKSFSL TCKSFYQLES KHRGSLKPLR SDYLPRILTR YRNTTDLDLT FCPRVTDYAL SVVGCLSGPT
101: LRSLDLSRSG SFSAAGLLRL ALKCVNLVEI DLSNATEMRD ADAAVVAEAR SLERLKLGRC KMLTDMGIGC IAVGCKKLNT VSLKWCVGVG DLGVGLLAVK
201: CKDIRTLDLS YLPITGKCLH DILKLQHLEE LLLEGCFGVD DDSLKSLRHD CKSLKKLDAS SCQNLTHRGL TSLLSGAGYL QRLDLSHCSS VISLDFASSL
301: KKVSALQSIR LDGCSVTPDG LKAIGTLCNS LKEVSLSKCV SVTDEGLSSL VMKLKDLRKL DITCCRKLSR VSITQIANSC PLLVSLKMES CSLVSREAFW
401: LIGQKCRLLE ELDLTDNEID DEGLKSISSC LSLSSLKLGI CLNITDKGLS YIGMGCSNLR ELDLYRSVGI TDVGISTIAQ GCIHLETINI SYCQDITDKS
501: LVSLSKCSLL QTFESRGCPN ITSQGLAAIA VRCKRLAKVD LKKCPSINDA GLLALAHFSQ NLKQINVSDT AVTEVGLLSL ANIGCLQNIA VVNSSGLRPS
601: GVAAALLGCG GLRKAKLHAS LRSLLPLSLI HHLEARGCAF LWKDNTLQAE LDPKYWKQQL EEMAP

Arabidopsis Description

FBL3F-box/LRR-repeat protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWU5]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.