Factsheet for GSMUA_Achr7P22290_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	cytosol, nucleus, peroxisome	82.96	83.19
VIT_08s0058g00700.t01	Wine grape	cytosol	59.78	64.56
PGSC0003DMT400030966	Potato	cytosol, plasma membrane, plastid	56.15	60.45
VIT_06s0004g07520.t01	Wine grape	cytosol	55.59	60.12
Solyc10g076290.1.1	Tomato	cytosol	56.42	59.85
KRH76059	Soybean	cytosol, nucleus, peroxisome	55.45	59.17
TraesCS5A01G150800.2	Wheat	mitochondrion	55.87	58.65
TraesCS5B01G149400.1	Wheat	mitochondrion	55.73	58.5
HORVU5Hr1G047420.2	Barley	cytosol, mitochondrion, plastid	54.05	57.33
EES07863	Sorghum	nucleus	55.03	57.02
Os12t0108500-01	Rice	cytosol, plasma membrane, plastid	55.45	56.96
KXG22793	Sorghum	nucleus	55.31	56.9
TraesCS5D01G155900.1	Wheat	mitochondrion	55.03	56.85
KRH65525	Soybean	cytosol, peroxisome, plastid	56.15	56.78
Zm00001d044622_P002	Maize	mitochondrion	55.73	56.68
AT5G01720.1	Thale cress	vacuole	51.54	55.49
Zm00001d005072_P003	Maize	mitochondrion	54.75	54.07
Bra005669.1-P	Field mustard	cytosol	50.28	53.89
CDX80753	Canola	endoplasmic reticulum	50.42	53.4
CDY11182	Canola	cytosol, endoplasmic reticulum, nucleus	50.42	53.4
KRH17127	Soybean	cytosol	48.32	53.07
Os11t0108932-01	Rice	nucleus	22.91	52.56
KRH72766	Soybean	cytosol	38.41	51.12
GSMUA_Achr11P...	Banana	cytosol	37.29	40.7
GSMUA_Achr6P20450_001	Banana	cytosol	37.01	40.15
GSMUA_Achr8P13910_001	Banana	mitochondrion	12.85	25.99
GSMUA_Achr5P19410_001	Banana	cytosol	15.22	25.65
GSMUA_Achr3P22880_001	Banana	cytosol	22.91	25.62
GSMUA_Achr2P17760_001	Banana	cytosol	12.43	25.14
GSMUA_Achr8P28940_001	Banana	cytosol	12.71	23.95
GSMUA_Achr10P...	Banana	cytosol	11.73	23.66
GSMUA_Achr6P05220_001	Banana	cytosol	21.09	23.09
GSMUA_Achr8P15580_001	Banana	cytosol	13.13	23.04
GSMUA_Achr2P05250_001	Banana	cytosol	15.5	22.84
GSMUA_Achr10P...	Banana	extracellular, plasma membrane, plastid	21.23	22.75
GSMUA_Achr4P30680_001	Banana	cytosol	20.67	22.7
GSMUA_Achr9P28510_001	Banana	cytosol, nucleus, peroxisome	20.39	22.32
GSMUA_Achr3P28280_001	Banana	plastid	14.94	21.7
GSMUA_Achr6P18620_001	Banana	cytosol	11.03	21.53
GSMUA_AchrUn_...	Banana	cytosol	11.03	21.47
GSMUA_Achr9P11380_001	Banana	cytosol	13.27	21.21
GSMUA_Achr4P12920_001	Banana	plastid	14.94	20.94
GSMUA_Achr9P22570_001	Banana	plastid	12.57	20.45
GSMUA_Achr2P15920_001	Banana	cytosol, peroxisome, plastid	18.85	20.21
GSMUA_Achr9P18840_001	Banana	plastid	15.92	15.62

Protein Annotations

Gene3D:3.80.10.10	MapMan:35.1	ncoils:Coil	InterPro:F-box-like_dom_sf	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	EnsemblPlantsGene:GSMUA_Achr7G22290_001	EnsemblPlants:GSMUA_Achr7P22290_001	EnsemblPlants:GSMUA_Achr7T22290_001	InterPro:IPR001611	InterPro:IPR032675
InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_Cys-con_subtyp	UniProt:M0TJR5	PFAM:PF13516	PANTHER:PTHR44309
PANTHER:PTHR44309:SF3	SMART:SM00367	SUPFAM:SSF52047	SUPFAM:SSF81383	UniParc:UPI0002950DBA	SEG:seg

Description

F-box/LRR-repeat protein 3 [Source:GMGC_GENE;Acc:GSMUA_Achr7G22290_001]

Coordinates

chr7:+:24808122..24812887

Molecular Weight (calculated)

77614.0 Da

IEP (calculated)

8.071

GRAVY (calculated)

0.186

Length

716 amino acids

Sequence
(BLAST)

001: MAESGDLFRR IRGRDGFTTV ALDLFSTTAN PSPCSYSGSA KRLRIGDAIP AAVVAEEDRH DLVDSLSEEI LFLILDRLES DPLDKKSFSL VCRSFYAAES
101: RHRRALTPLL SDLLPAALAR YPLASRLDLS LCPRITDAAL ASVRGALRSS LRSIDLSRST GFSQAGIGNL AVNCAALVEI NLSNATDLSD AAAAAIGRSR
201: NLERLWLARC KMVTDMGIGC IAVGCQKLRL LCLKWCLGIS DLGVGLVAVK CKRLRTLDLS FMPITKKCLP AVLQLPHLED LALVGCLSID DEGLISLKQE
301: CKSLQVLDMS NCQHVSHAAF SSVLNKAPGL RQMTLAYNCL VTHSLASSLQ KLSKLRCIRL DGSEVTTSGL GTIANSCKSL RELSLSKCSG VTDEGLSSIV
401: MKHKGLVKLD VTCCRNITDF SLASITSSCN SLTSLRMESC TLVSKEGLRL IGQHCHLLEE LDLTDNDLDD EGLRAISGCQ KLCILKIGIC LKIRDEGLIH
501: VAKSCSKLQE IDLYRSIGIT DTGVMAIARG FPLLQTINLA YCTGITDDSL RSLSKCSNLY TLEIRGCPQV SSLGLAAISV GCQKLTNLDI KKCYHVNDAG
601: ILFLACFSQN LRQINLSYCS VTDVGLLALA SVSCLQNMTI LHLGRLTPSG LAAALLACGG LTKVKLHSSF KPLVPKPLLK HIEARGCVFQ WRDKPFQVEL
701: EPSEVWKQHS QEMHVE

Best Arabidopsis Sequence Match ( AT5G01720.1 )
(BLAST)

001: MKKVKQIRVL KPFDLLSEEL VFIILDLISP NPSDLKSFSL TCKSFYQLES KHRGSLKPLR SDYLPRILTR YRNTTDLDLT FCPRVTDYAL SVVGCLSGPT
101: LRSLDLSRSG SFSAAGLLRL ALKCVNLVEI DLSNATEMRD ADAAVVAEAR SLERLKLGRC KMLTDMGIGC IAVGCKKLNT VSLKWCVGVG DLGVGLLAVK
201: CKDIRTLDLS YLPITGKCLH DILKLQHLEE LLLEGCFGVD DDSLKSLRHD CKSLKKLDAS SCQNLTHRGL TSLLSGAGYL QRLDLSHCSS VISLDFASSL
301: KKVSALQSIR LDGCSVTPDG LKAIGTLCNS LKEVSLSKCV SVTDEGLSSL VMKLKDLRKL DITCCRKLSR VSITQIANSC PLLVSLKMES CSLVSREAFW
401: LIGQKCRLLE ELDLTDNEID DEGLKSISSC LSLSSLKLGI CLNITDKGLS YIGMGCSNLR ELDLYRSVGI TDVGISTIAQ GCIHLETINI SYCQDITDKS
501: LVSLSKCSLL QTFESRGCPN ITSQGLAAIA VRCKRLAKVD LKKCPSINDA GLLALAHFSQ NLKQINVSDT AVTEVGLLSL ANIGCLQNIA VVNSSGLRPS
601: GVAAALLGCG GLRKAKLHAS LRSLLPLSLI HHLEARGCAF LWKDNTLQAE LDPKYWKQQL EEMAP

Arabidopsis Description

FBL3F-box/LRR-repeat protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWU5]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.