Factsheet for GSMUA_Achr11P18070_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P20450_001	Banana	cytosol	76.98	76.52
Zm00001d041635_P002	Maize	cytosol	62.2	61.54
Zm00001d023825_P001	Maize	cytosol	61.74	61.36
TraesCS5A01G091800.2	Wheat	cytosol	61.43	60.97
KXG23663	Sorghum	cytosol	61.43	60.88
KXG29052	Sorghum	plastid	61.13	60.76
TraesCS5B01G097800.2	Wheat	cytosol	61.13	60.67
TraesCS5D01G103900.3	Wheat	cytosol	61.28	60.36
Os12t0552700-01	Rice	cytosol, peroxisome	34.15	60.05
Zm00001d048695_P001	Maize	cytosol	58.99	59.72
VIT_14s0060g01970.t01	Wine grape	cytosol, plastid	53.66	54.74
KRH68483	Soybean	cytosol	51.52	52.73
KRG96764	Soybean	cytosol	50.61	51.79
CDX80608	Canola	cytosol	48.78	50.0
CDX88253	Canola	cytosol	48.63	49.84
Bra009931.1-P	Field mustard	cytosol	48.48	49.69
AT5G27920.1	Thale cress	cytosol, extracellular, peroxisome	48.02	49.07
CDY53337	Canola	cytosol	47.56	48.83
CDY19741	Canola	cytosol	45.88	48.78
Bra036607.1-P	Field mustard	cytosol	47.41	48.67
Solyc01g099970.2.1	Tomato	extracellular	45.88	48.63
PGSC0003DMT400063732	Potato	cytosol	47.41	48.52
HORVU5Hr1G024060.1	Barley	cytosol, plastid	61.43	47.81
GSMUA_Achr7P22290_001	Banana	cytosol	40.7	37.29
GSMUA_Achr10P...	Banana	cytosol, nucleus, peroxisome	40.55	37.25
GSMUA_Achr3P22880_001	Banana	cytosol	25.15	25.78
GSMUA_Achr8P13910_001	Banana	mitochondrion	13.57	25.14
GSMUA_Achr8P28940_001	Banana	cytosol	14.33	24.74
GSMUA_Achr10P...	Banana	cytosol	13.11	24.23
GSMUA_Achr5P19410_001	Banana	cytosol	15.55	24.0
GSMUA_Achr2P17760_001	Banana	cytosol	12.65	23.45
GSMUA_AchrUn_...	Banana	cytosol	12.65	22.55
GSMUA_Achr6P18620_001	Banana	cytosol	12.5	22.34
GSMUA_Achr4P30680_001	Banana	cytosol	21.65	21.78
GSMUA_Achr6P05220_001	Banana	cytosol	21.34	21.41
GSMUA_Achr8P15580_001	Banana	cytosol	12.8	20.59
GSMUA_Achr10P...	Banana	extracellular, plasma membrane, plastid	20.73	20.36
GSMUA_Achr9P28510_001	Banana	cytosol, nucleus, peroxisome	20.12	20.18
GSMUA_Achr2P05250_001	Banana	cytosol	14.33	19.34
GSMUA_Achr9P11380_001	Banana	cytosol	12.96	18.97
GSMUA_Achr3P28280_001	Banana	plastid	14.02	18.66
GSMUA_Achr2P15920_001	Banana	cytosol, peroxisome, plastid	18.9	18.56
GSMUA_Achr9P22570_001	Banana	plastid	11.43	17.05
GSMUA_Achr4P12920_001	Banana	plastid	12.96	16.63
GSMUA_Achr9P18840_001	Banana	plastid	14.48	13.01

Protein Annotations

EnsemblPlants:GSMUA_Achr11P18070_001	EnsemblPlants:GSMUA_Achr11T18070_001	EnsemblPlantsGene:GSMUA_Achr11G18070_001	Gene3D:3.80.10.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_Cys-con_subtyp
PANTHER:PTHR44309	PANTHER:PTHR44309:SF2	PFAM:PF13516	SEG:seg	SMART:SM00367	SUPFAM:SSF52047
UniParc:UPI000294EA63	UniProt:M0RT87	MapMan:35.1	:	:	:

Description

Putative F-box/LRR-repeat protein 3 [Source:GMGC_GENE;Acc:GSMUA_Achr11G18070_001]

Coordinates

chr11:-:19553593..19556742

Molecular Weight (calculated)

71639.9 Da

IEP (calculated)

7.574

GRAVY (calculated)

0.197

Length

656 amino acids

Sequence
(BLAST)

001: MERAPQQSSD SILATFSVDL LIQILDRVAD SRDRKSWRQV CRGFLHAEAL RRLSLRVLRL EALQGLLRRY AACLERLDLS ACPSLDDHAL AAALASGAGL
101: WRLRSINLSR ASGVGWRGLA ALAKACPHLE AVDLSHCVGV GDREAASLAA AAGLRDLWLD KCLGLTDVGL AKVAVGCPAL EMLGIKWCLE ISDIGIELLA
201: KKCQNLRVLD ISYLKITNRS LQFVSSLRKL EDLSMVGCSH INDEGLQFLN NGSNSLQTVD VSRCENVTSS GLISVIEGHK YLQDLNIGDC FPELAPLFLS
301: KLNYLRDSLT VLKLDGFQVF APSLKIIGLN CRNLVEIGLS KCKWVTDEGV SELVAGCVNL TTIDLTCCHL LTNKALVAIG DKCKNLTCLQ LESCKLITDN
401: GLDCIGTCCS NLEEIDLTDC TMTNAAMKYL SRCSELTVLK LGLCDKVSDE GLVHIASNCK KLRVLDLYRC FEVTDDGLAA IATGCKRIKN LNLCYCTRIT
501: DLGLKHLSCL EDLHDLELRG VHCVTSLGIT AIANGCQHLT ELDLKHCHLV DDAGLFALGQ YTKNLRQANL SYCQVSSMGL CNLLGSLKCL QDVKLVHLTQ
601: VPVEGFESAL RASGGRLKKL KLLTGLRHLL SPGLIQMLQA RGCRIRWVDK PLNLVP

Best Arabidopsis Sequence Match ( AT5G27920.1 )
(BLAST)

001: MSTSPSILSV LSEDLLVRVY ECLDPPCRKT WRLISKDFLR VDSLTRTTIR ILRVEFLPTL LFKYPNLSSL DLSVCPKLDD DVVLRLALDG AISTLGIKSL
101: NLSRSTAVRA RGLETLARMC HALERVDVSH CWGFGDREAA ALSSATGLRE LKMDKCLSLS DVGLARIVVG CSNLNKISLK WCMEISDLGI DLLCKICKGL
201: KSLDVSYLKI TNDSIRSIAL LVKLEVLDMV SCPLIDDGGL QFLENGSPSL QEVDVTRCDR VSLSGLISIV RGHPDIQLLK ASHCVSEVSG SFLKYIKGLK
301: HLKTIWIDGA HVSDSSLVSL SSSCRSLMEI GLSRCVDVTD IGMISLARNC LNLKTLNLAC CGFVTDVAIS AVAQSCRNLG TLKLESCHLI TEKGLQSLGC
401: YSMLVQELDL TDCYGVNDRG LEYISKCSNL QRLKLGLCTN ISDKGIFHIG SKCSKLLELD LYRCAGFGDD GLAALSRGCK SLNRLILSYC CELTDTGVEQ
501: IRQLELLSHL ELRGLKNITG VGLAAIASGC KKLGYLDVKL CENIDDSGFW ALAYFSKNLR QINLCNCSVS DTALCMLMSN LSRVQDVDLV HLSRVTVEGF
601: EFALRACCNR LKKLKLLAPL RFLLSSELLE TLHARGCRIR WD

Arabidopsis Description

At5g27920 [Source:UniProtKB/TrEMBL;Acc:Q8GZ31]
SUBAcon: [peroxisome,extracellular,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.