CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d041635_P002	Maize	cytosol	96.37	96.23
Os12t0552700-01	Rice	cytosol, peroxisome	49.55	87.94
TraesCS5A01G091800.2	Wheat	cytosol	85.8	85.93
TraesCS5B01G097800.2	Wheat	cytosol	85.35	85.48
TraesCS5D01G103900.3	Wheat	cytosol	85.2	84.68
KXG29052	Sorghum	plastid	72.96	73.18
HORVU5Hr1G024060.1	Barley	cytosol, plastid	84.74	66.55
GSMUA_Achr11P...	Banana	cytosol	60.88	61.43
GSMUA_Achr6P20450_001	Banana	cytosol	59.82	60.0
KRH68483	Soybean	cytosol	51.36	53.04
KRG96764	Soybean	cytosol	51.06	52.73
VIT_14s0060g01970.t01	Wine grape	cytosol, plastid	50.6	52.1
CDX88253	Canola	cytosol	49.09	50.78
Bra009931.1-P	Field mustard	cytosol	48.94	50.62
CDX80608	Canola	cytosol	48.94	50.62
CDY19741	Canola	cytosol	46.68	50.08
AT5G27920.1	Thale cress	cytosol, extracellular, peroxisome	48.49	50.0
Bra036607.1-P	Field mustard	cytosol	48.19	49.92
CDY53337	Canola	cytosol	47.89	49.61
PGSC0003DMT400063732	Potato	cytosol	46.98	48.52
Solyc01g099970.2.1	Tomato	extracellular	45.02	48.14
KXG22793	Sorghum	nucleus	39.43	37.5
EES07863	Sorghum	nucleus	38.67	37.05
KXG30697	Sorghum	cytosol	19.64	30.81
EES08900	Sorghum	cytosol	27.34	28.5
EES09509	Sorghum	cytosol	14.65	25.13
EES04933	Sorghum	cytosol	13.14	24.93
EER90022	Sorghum	cytosol, plastid	21.45	22.68
EES06473	Sorghum	cytosol, peroxisome, plasma membrane	22.36	22.6
EES18256	Sorghum	cytosol, nucleus, plastid	12.24	21.95
EES03986	Sorghum	cytosol	12.08	21.0
OQU89081	Sorghum	cytosol	16.16	20.38
KXG26667	Sorghum	plastid	12.69	17.95

Protein Annotations

EnsemblPlants:KXG23663	EnsemblPlantsGene:SORBI_3008G124500	Gene3D:3.80.10.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_Cys-con_subtyp	PANTHER:PTHR44309
PANTHER:PTHR44309:SF2	PFAM:PF13516	ProteinID:KXG23663	ProteinID:KXG23663.1	SEG:seg	SMART:SM00367
SUPFAM:SSF52047	UniParc:UPI00081ABB49	UniProt:A0A1B6PDB4	MapMan:35.1	:	:

Description

hypothetical protein

Coordinates

chr8:+:54784523..54788642

Molecular Weight (calculated)

71446.8 Da

IEP (calculated)

7.370

GRAVY (calculated)

0.209

Length

662 amino acids

Sequence
(BLAST)

001: MSREAQKLDS AAGDGAVGIG VLSLDLLGQV LDRLREPRDR KACRLVSRAF ERAEAAHRRA LRVLRREPLP RLLRAFPALE RLDVSACASL DDASLAAAVA
101: GAGGGLAGLR SVCLARANGV GWRGLEALVA ACPRLEAVDL SHCVSAGDRE LAAVAAAAGL RELRLDKCLA VTDMGLAKVA VGCPRLEKLS LKWCREISDI
201: GIDLLAKKCP ELRSLNISYL KVGNGSLRSI SSLERLEELA MVCCSCIDDE GLELLSKGSD SLQSVDVSRC DHVTSEGLAS LIDGRNFVQK LYAADCLHEI
301: GQRFLSKLAT LKETLTMLKL DGLEVSDSLL QAIGESCNKL VEIGLSKCSG VTDDGISSLV AQCSDLRTID LTCCNLITNN ALDSIADNCK MLECLRLESC
401: SLINEKGLKR IATCCPNLKE IDLTDCGVDD AALEHLAKCS ELRILKLGLC SSISDKGIAF ISSNCGKLVE LDLYRCNSIT DDGLAALVNG CKRIKLLNLC
501: YCNKITDTGL GHLGSLEELT NLELRCLVRI TGIGISSVAI GCKSLIELDL KRCYSVDDAG LWALARYALN LRQLTISYCQ VTGLGLCHLL SSLRCLQDIK
601: MVHLSWVSIE GFEMALRAAC GRLKKLKMLC GLKTVLSPEL LQMLQACGCR IRWVNKPLVY KD

Best Arabidopsis Sequence Match ( AT5G27920.1 )
(BLAST)

001: MSTSPSILSV LSEDLLVRVY ECLDPPCRKT WRLISKDFLR VDSLTRTTIR ILRVEFLPTL LFKYPNLSSL DLSVCPKLDD DVVLRLALDG AISTLGIKSL
101: NLSRSTAVRA RGLETLARMC HALERVDVSH CWGFGDREAA ALSSATGLRE LKMDKCLSLS DVGLARIVVG CSNLNKISLK WCMEISDLGI DLLCKICKGL
201: KSLDVSYLKI TNDSIRSIAL LVKLEVLDMV SCPLIDDGGL QFLENGSPSL QEVDVTRCDR VSLSGLISIV RGHPDIQLLK ASHCVSEVSG SFLKYIKGLK
301: HLKTIWIDGA HVSDSSLVSL SSSCRSLMEI GLSRCVDVTD IGMISLARNC LNLKTLNLAC CGFVTDVAIS AVAQSCRNLG TLKLESCHLI TEKGLQSLGC
401: YSMLVQELDL TDCYGVNDRG LEYISKCSNL QRLKLGLCTN ISDKGIFHIG SKCSKLLELD LYRCAGFGDD GLAALSRGCK SLNRLILSYC CELTDTGVEQ
501: IRQLELLSHL ELRGLKNITG VGLAAIASGC KKLGYLDVKL CENIDDSGFW ALAYFSKNLR QINLCNCSVS DTALCMLMSN LSRVQDVDLV HLSRVTVEGF
601: EFALRACCNR LKKLKLLAPL RFLLSSELLE TLHARGCRIR WD

Arabidopsis Description

At5g27920 [Source:UniProtKB/TrEMBL;Acc:Q8GZ31]
SUBAcon: [peroxisome,extracellular,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.