CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
cytosol 1
mitochondrion 1
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d048695_P001	Maize	cytosol	89.55	91.2
KXG23663	Sorghum	cytosol	73.18	72.96
GSMUA_Achr11P...	Banana	cytosol	60.76	61.13
GSMUA_Achr6P20450_001	Banana	cytosol	60.3	60.3
KRH68483	Soybean	cytosol	49.55	51.01
KRG96764	Soybean	cytosol	49.09	50.55
VIT_14s0060g01970.t01	Wine grape	cytosol, plastid	49.09	50.39
CDY19741	Canola	cytosol	45.3	48.46
CDX88253	Canola	cytosol	46.82	48.28
Bra009931.1-P	Field mustard	cytosol	46.67	48.12
CDX80608	Canola	cytosol	46.52	47.97
CDY53337	Canola	cytosol	46.06	47.57
Bra036607.1-P	Field mustard	cytosol	45.76	47.26
AT5G27920.1	Thale cress	cytosol, extracellular, peroxisome	45.45	46.73
PGSC0003DMT400063732	Potato	cytosol	44.39	45.71
Solyc01g099970.2.1	Tomato	extracellular	42.73	45.56
KXG22793	Sorghum	nucleus	39.55	37.5
EES07863	Sorghum	nucleus	38.18	36.47
KXG30697	Sorghum	cytosol	18.64	29.15
EES08900	Sorghum	cytosol	26.82	27.87
EES04933	Sorghum	cytosol	12.88	24.36
EES18256	Sorghum	cytosol, nucleus, plastid	13.03	23.31
EES09509	Sorghum	cytosol	13.48	23.06
EES03986	Sorghum	cytosol	13.18	22.83
EES06473	Sorghum	cytosol, peroxisome, plasma membrane	21.21	21.37
EER90022	Sorghum	cytosol, plastid	20.0	21.09
OQU89081	Sorghum	cytosol	16.21	20.38
KXG26667	Sorghum	plastid	11.67	16.45

Protein Annotations

EnsemblPlants:KXG29052	EnsemblPlantsGene:SORBI_3005G205000	Gene3D:3.80.10.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_Cys-con_subtyp	PANTHER:PTHR44309
PANTHER:PTHR44309:SF2	PFAM:PF13516	ProteinID:KXG29052	ProteinID:KXG29052.1	ProteinID:KXG29054.1	SEG:seg
SMART:SM00367	SUPFAM:SSF52047	UniParc:UPI00081AE142	UniProt:A0A1B6PTQ8	MapMan:35.1	:

Description

hypothetical protein

Coordinates

chr5:-:69062326..69068144

Molecular Weight (calculated)

70741.7 Da

IEP (calculated)

6.996

GRAVY (calculated)

0.293

Length

660 amino acids

Sequence
(BLAST)

001: MSHGDSGSSS GVGTGAGVES LSLDLLAHAL AGVGDPRDRK SCRLASRGFA RAEAASRRAA RVLRREALPR ALRAFPALSS LDLSACAGLD DASLAAALPE
101: APAPLLAVRR VRLARASGVG WRGLEALVAA CPRLEAVDLS HCVAVGDREM AALAAAAGLR ELVMDKCLGV TDVGLAKVAV GCPGLERLSV KWCREISDIG
201: VELLAKKCPQ LRSVDISYLK VTNESLRSLS TLEKLEDIAM VGCLFIDDDG LQMLSMCNSL QSIDVSRCNH VSSLGLASLI DDQRFLQKIN VGHSLHEIET
301: CLLSKLSTIG ETLTVLRLDG LEIFASNLQA IGSTCKNLVE IGLSKCNGIT DDGIVSLVAH CCDLRTIDVT CCHLLTNDAL AAIAENCRKI ECLQLESCPF
401: ISEKGLERIT TLCSHLKEID LTDCRINDTA LKHLASCSEL LILKLGLCSS ISDEGLVYIS SNCGKLVELD LYRCSGITDD GLAAVASGCK KIRVLNLCYC
501: TQITDAGLKH VSALEELTNL ELRCLVRITG IGITSIAIGC TSLIELDLKR CYSVDDAGLW ALSRYSQNLR QLTISYCQVT GLGLCHLLGS LRCLQDVKMV
601: HLSWVSIEGF EMALRAACGR LKKLKLLGGL RSVLSTELLQ MLQACGCRVR WVDKPLVYKG

Best Arabidopsis Sequence Match ( AT5G27920.1 )
(BLAST)

001: MSTSPSILSV LSEDLLVRVY ECLDPPCRKT WRLISKDFLR VDSLTRTTIR ILRVEFLPTL LFKYPNLSSL DLSVCPKLDD DVVLRLALDG AISTLGIKSL
101: NLSRSTAVRA RGLETLARMC HALERVDVSH CWGFGDREAA ALSSATGLRE LKMDKCLSLS DVGLARIVVG CSNLNKISLK WCMEISDLGI DLLCKICKGL
201: KSLDVSYLKI TNDSIRSIAL LVKLEVLDMV SCPLIDDGGL QFLENGSPSL QEVDVTRCDR VSLSGLISIV RGHPDIQLLK ASHCVSEVSG SFLKYIKGLK
301: HLKTIWIDGA HVSDSSLVSL SSSCRSLMEI GLSRCVDVTD IGMISLARNC LNLKTLNLAC CGFVTDVAIS AVAQSCRNLG TLKLESCHLI TEKGLQSLGC
401: YSMLVQELDL TDCYGVNDRG LEYISKCSNL QRLKLGLCTN ISDKGIFHIG SKCSKLLELD LYRCAGFGDD GLAALSRGCK SLNRLILSYC CELTDTGVEQ
501: IRQLELLSHL ELRGLKNITG VGLAAIASGC KKLGYLDVKL CENIDDSGFW ALAYFSKNLR QINLCNCSVS DTALCMLMSN LSRVQDVDLV HLSRVTVEGF
601: EFALRACCNR LKKLKLLAPL RFLLSSELLE TLHARGCRIR WD

Arabidopsis Description

At5g27920 [Source:UniProtKB/TrEMBL;Acc:Q8GZ31]
SUBAcon: [peroxisome,extracellular,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.