CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d015974_P002	Maize	cytosol	93.7	91.34
TraesCS3B01G080300.1	Wheat	cytosol	81.66	81.2
TraesCS3A01G067800.1	Wheat	cytosol	81.38	80.91
TraesCS3D01G067600.2	Wheat	cytosol	81.09	80.86
Os02t0281150-01	Rice	cytosol	82.23	80.62
HORVU3Hr1G012530.12	Barley	cytosol	80.8	80.34
GSMUA_Achr2P17760_001	Banana	cytosol	66.48	65.54
PGSC0003DMT400074998	Potato	cytosol	64.76	65.32
Solyc06g005380.2.1	Tomato	cytosol	64.47	65.03
VIT_08s0007g07030.t01	Wine grape	cytosol	63.61	63.43
CDX71945	Canola	cytosol	63.61	62.89
CDY06032	Canola	cytosol	63.32	62.61
Bra007401.1-P	Field mustard	cytosol	44.13	62.6
AT3G58530.1	Thale cress	cytosol	60.74	60.06
KRH38032	Soybean	cytosol	61.89	57.14
KXG30697	Sorghum	cytosol	22.92	18.96
EES08900	Sorghum	cytosol	27.51	15.12
EES03986	Sorghum	cytosol	16.05	14.7
EES18256	Sorghum	cytosol, nucleus, plastid	15.47	14.63
EER90022	Sorghum	cytosol, plastid	26.07	14.54
OQU89081	Sorghum	cytosol	21.49	14.29
EES06473	Sorghum	cytosol, peroxisome, plasma membrane	25.79	13.74
KXG23663	Sorghum	cytosol	24.93	13.14
KXG29052	Sorghum	plastid	24.36	12.88
EES07863	Sorghum	nucleus	25.21	12.74
KXG22793	Sorghum	nucleus	25.21	12.64
KXG26667	Sorghum	plastid	16.91	12.61
EES09509	Sorghum	cytosol	13.75	12.44

Protein Annotations

Gene3D:3.80.10.10	MapMan:35.1	EntrezGene:8080408	UniProt:C5Y044	EnsemblPlants:EES04933	ProteinID:EES04933
ProteinID:EES04933.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_dom_sf
InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_Cys-con_subtyp	PFAM:PF13516	PANTHER:PTHR44001	PANTHER:PTHR44001:SF1	SMART:SM00367
EnsemblPlantsGene:SORBI_3004G127900	SUPFAM:SSF52047	unigene:Sbi.20577	UniParc:UPI0001A8539F	RefSeq:XP_002451957.1	SEG:seg

Description

hypothetical protein

Coordinates

chr4:+:16051626..16056411

Molecular Weight (calculated)

38668.2 Da

IEP (calculated)

7.623

GRAVY (calculated)

0.134

Length

349 amino acids

Sequence
(BLAST)

001: MAAPAADETW CRETVPRVME LVSPRLPQRD ACALLAVSPW CYRALVANPR LWEVLDLREM KNAGDRLISA LSLARYRHLK VLNLEFAQDI EDRHFVHLKE
101: MSGISLENLE FLNLNACQKI SDKGIEAVTS LCPNLQRLAI YWIVGLTDLS IGHITKNCKQ IVDLNLSGCK NISDKGMQLI ANNYQELKKL NITRCVKLTD
201: DGLKQVLLKC SSLESLNLYA LSSFTDRVYK EIGSLSNLTF LDLCGAQNLT DDGLACISRC GCLTYLNLTW CVRVTDAGIV AIAQGCRSLE LLSLFGIVGV
301: TDACLEALSK SCSSSLTTLD VNGCIGIKRR SRDDLLKLFP SLSCFKVHS

Best Arabidopsis Sequence Match ( AT3G58530.1 )
(BLAST)

001: MEAKKVTEEE EETWRREIVT SVMRLVSTRL PQTDLISLLL VSPWLYRTLI SYPSIWLTIN LREMTNAGDR LLAALSLPRY RQVKHINLEF AQGVVDSHLK
101: LVKTECPDAL LSLEWLNLNV CQKISDNGIE AITSICPKLK VFSIYWNVRV TDAGIRNLVK NCRHITDLNL SGCKSLTDKS MQLVAESYPD LESLNITRCV
201: KITDDGLLQV LQKCFSLQTL NLYALSGFTD KAYMKISLLA DLRFLDICGA QNISDEGIGH IAKCNKLESL NLTWCVRITD AGVNTIANSC TSLEFLSLFG
301: IVGVTDRCLE TLSQTCSTTL TTLDVNGCTG IKRRSREELL QMFPRLTCFK VHS

Arabidopsis Description

F-box protein At3g58530 [Source:UniProtKB/Swiss-Prot;Acc:Q8LB33]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.