Factsheet for Os02t0281150-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES04933	Sorghum	cytosol	80.62	82.23
HORVU3Hr1G012530.12	Barley	cytosol	80.34	81.48
TraesCS3B01G080300.1	Wheat	cytosol	80.34	81.48
TraesCS3D01G067600.2	Wheat	cytosol	79.78	81.14
TraesCS3A01G067800.1	Wheat	cytosol	79.49	80.63
Zm00001d015974_P002	Maize	cytosol	77.53	77.09
GSMUA_Achr2P17760_001	Banana	cytosol	66.29	66.67
VIT_08s0007g07030.t01	Wine grape	cytosol	63.48	64.57
Solyc06g005380.2.1	Tomato	cytosol	62.08	63.87
PGSC0003DMT400074998	Potato	cytosol	62.08	63.87
CDX71945	Canola	cytosol	60.11	60.62
Bra007401.1-P	Field mustard	cytosol	41.57	60.16
CDY06032	Canola	cytosol	59.55	60.06
AT3G58530.1	Thale cress	cytosol	58.71	59.21
KRH38032	Soybean	cytosol	61.52	57.94
Os02t0636400-01	Rice	cytosol	10.96	19.5
Os12t0552700-01	Rice	cytosol, peroxisome	17.13	16.35
Os01t0881900-01	Rice	cytosol	15.73	14.78
Os05t0425700-01	Rice	cytosol	15.17	14.36
Os06t0605900-01	Rice	cytosol	24.44	13.88
Os04t0505700-01	Rice	cytosol, mitochondrion	15.17	13.01
Os10t0148800-01	Rice	cytosol	17.42	12.45
Os02t0200900-01	Rice	cytosol	22.75	12.27
Os11t0264200-01	Rice	cytosol	12.92	12.07
Os12t0108500-01	Rice	cytosol, plasma membrane, plastid	21.07	10.76
Os11t0641200-01	Rice	cytosol	10.11	10.06
Os11t0108932-01	Rice	nucleus	6.18	7.05
Os09t0113000-01	Rice	cytosol, nucleus	0.84	3.7

Protein Annotations

Gene3D:3.80.10.10	MapMan:35.1	UniProt:A0A0P0VHR8	ProteinID:BAS78127.1	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829
InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_Cys-con_subtyp	EnsemblPlantsGene:Os02g0281150
EnsemblPlants:Os02t0281150-01	PFAM:PF13516	PANTHER:PTHR44001	PANTHER:PTHR44001:SF2	SMART:SM00367	SUPFAM:SSF52047
UniParc:UPI000393917D	SEG:seg	:	:	:	:

Description

Similar to Leucine Rich Repeat family protein. (Os02t0281150-01)

Coordinates

chr2:+:10437396..10440764

Molecular Weight (calculated)

39368.1 Da

IEP (calculated)

7.261

GRAVY (calculated)

0.154

Length

356 amino acids

Sequence
(BLAST)

001: AATAAAEAEA AAGDEAWCRE TVPRVMELVS PRLPQRDACA LLAVSPWCHR ALVANPKLWE VLDLHEMNKA GDRLISAISL PRYCHLKIIN LEFAQDIDDR
101: HFVRLKEMGC TSLQELELLN INACQKVSDK GIETITSLCP NLRALSIYWI VGLTDLTIRH IVQNCKHIVD LNLSGCKNIS DKGMQLVADN YEGLKKLNIT
201: RCIKLTDDGL QEVLQKCSSL ESLNLYALSS FSDKVYKKIG SLTNLTFLDL CGAQNVTDDG LSCISRCVCL TYLNLSWCVR VTDVGVVAIA QGCRSLQLLS
301: LFGIVGVTDV CLEALSKHCS RSLTTLDVNG CIGIKKRSRD DLIQLFPLLR CFKVHS

Best Arabidopsis Sequence Match ( AT3G58530.1 )
(BLAST)

001: MEAKKVTEEE EETWRREIVT SVMRLVSTRL PQTDLISLLL VSPWLYRTLI SYPSIWLTIN LREMTNAGDR LLAALSLPRY RQVKHINLEF AQGVVDSHLK
101: LVKTECPDAL LSLEWLNLNV CQKISDNGIE AITSICPKLK VFSIYWNVRV TDAGIRNLVK NCRHITDLNL SGCKSLTDKS MQLVAESYPD LESLNITRCV
201: KITDDGLLQV LQKCFSLQTL NLYALSGFTD KAYMKISLLA DLRFLDICGA QNISDEGIGH IAKCNKLESL NLTWCVRITD AGVNTIANSC TSLEFLSLFG
301: IVGVTDRCLE TLSQTCSTTL TTLDVNGCTG IKRRSREELL QMFPRLTCFK VHS

Arabidopsis Description

F-box protein At3g58530 [Source:UniProtKB/Swiss-Prot;Acc:Q8LB33]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.