Factsheet for Os11t0264200-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G083300.1	Wheat	cytosol	78.48	77.46
HORVU4Hr1G014630.1	Barley	cytosol	76.38	75.39
EES09509	Sorghum	cytosol	71.13	70.21
TraesCS4B01G085300.2	Wheat	plastid	70.08	65.93
TraesCS4A01G230600.2	Wheat	plastid	69.82	65.68
Zm00001d007294_P001	Maize	cytosol	61.94	58.13
GSMUA_Achr8P28940_001	Banana	cytosol	52.23	52.37
PGSC0003DMT400053176	Potato	cytosol	47.77	46.67
Solyc06g007680.1.1	Tomato	cytosol	47.24	45.0
KRH47976	Soybean	cytosol	45.67	44.85
CDY35942	Canola	cytosol	44.36	42.78
Bra029656.1-P	Field mustard	cytosol	43.83	42.28
AT3G07550.2	Thale cress	cytosol	43.83	42.28
CDY28039	Canola	cytosol	43.04	42.05
Os11t0108932-01	Rice	nucleus	15.22	18.59
Os01t0881900-01	Rice	cytosol	18.11	18.21
Os11t0641200-01	Rice	cytosol	16.54	17.6
Os05t0425700-01	Rice	cytosol	17.06	17.29
Os12t0108500-01	Rice	cytosol, plasma membrane, plastid	25.72	14.06
Os02t0200900-01	Rice	cytosol	24.15	13.94
Os02t0636400-01	Rice	cytosol	7.09	13.5
Os10t0148800-01	Rice	cytosol	17.59	13.45
Os02t0281150-01	Rice	cytosol	12.07	12.92
Os04t0505700-01	Rice	cytosol, mitochondrion	13.65	12.53
Os06t0605900-01	Rice	cytosol	19.16	11.64
Os12t0552700-01	Rice	cytosol, peroxisome	10.76	10.99
Os09t0113000-01	Rice	cytosol, nucleus	0.0	0.0

Protein Annotations

Gene3D:3.80.10.10	MapMan:35.1	ProteinID:AAX96094.1	ProteinID:ABA92483.1	EMBL:AK100912	EMBL:AK100924
ProteinID:BAF28014.1	ProteinID:BAT13515.1	ProteinID:EAZ18018.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003676
GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_dom_sf
InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_Cys-con_subtyp	EnsemblPlantsGene:Os11g0264200	EnsemblPlants:Os11t0264200-01	PFAM:PF13516	PANTHER:PTHR44001
UniProt:Q53LU3	SMART:SM00367	SUPFAM:SSF52047	UniParc:UPI00005094EC	SEG:seg	:

Description

F-box protein 598Cyclin-like F-box domain containing protein. (Os11t0264200-01)

Coordinates

chr11:+:8965406..8970029

Molecular Weight (calculated)

41676.6 Da

IEP (calculated)

7.064

GRAVY (calculated)

0.170

Length

381 amino acids

Sequence
(BLAST)

001: MDDNVENYIN FLSDDCLICI FNKLESESDR NAFGLTCKNW FKVRNIARKS IIFHCSFNPK VYKEHANCLS KLLARSPYLN LVSLAGLTEL PDTALNQLRI
101: SGASLQSLSF YCCSGITDDG LEVVSIGCPN LVSLELYRCF NITDHGLENL CKGCHALKSL NLGYCVAISD QGIAAIFRNC PNISTIIIAY CRGLSGVGFR
201: GCPGTLSHLE AESCMLSPDG LLDVVSGGGL EYLNLYNLKS PTGLDGLDRV GYARSLRFLN LRMCRYLTDD SVTAIASGCP LIEEWSLAVC HGVRLPGWSA
301: IGLLCNKLRI LHVNRCRNIC DQGLQALGDG CVCLQVLHIH GCGKITNNGL ASFSIARPNV KQRADEVMCI GPSIEDLFRL Q

Best Arabidopsis Sequence Match ( AT3G07550.2 )
(BLAST)

001: MEDVSESDNN VETSIIHLPD DCLSFIFQRL DSVADHDSFG LTCHRWLNIQ NISRRSLQFQ CSFSVLNPSS LSQTNPDVSS HHLHRLLTRF QWLEHLSLSG
101: CTVLNDSSLD SLRYPGARLH TLYLDCCFGI SDDGISTIAS FCPNLSVVSL YRCNISDIGL ETLARASLSL KCVNLSYCPL VSDFGIKALS QACLQLESVK
201: ISNCKSITGV GFSGCSPTLG YVDADSCQLE PKGITGIISG GGIEFLNISG VSCYIRKDGL VPIGSGIASK LRILNLRMCR TVGDESIEAI AKGCPLLQEW
301: NLALCHEVKI SGWEAVGKWC RNLKKLHVNR CRNLCDQGLL ALRCGCMNLQ ILYMNGNARL TPTAIEMFRL HRADITLRTE EMMVIGPDWR LYAQE

Arabidopsis Description

FBL12F-box/LRR-repeat protein 12 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRR1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.