Factsheet for TraesCS4B01G085300.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G230600.2	Wheat	plastid	98.27	98.27
TraesCS4D01G083300.1	Wheat	cytosol	81.98	86.01
HORVU4Hr1G014630.1	Barley	cytosol	78.27	82.12
Os11t0264200-01	Rice	cytosol	65.93	70.08
Zm00001d007294_P001	Maize	cytosol	68.89	68.72
EES09509	Sorghum	cytosol	60.49	63.47
GSMUA_Achr8P28940_001	Banana	cytosol	44.44	47.37
KRH47976	Soybean	cytosol	40.49	42.27
PGSC0003DMT400053176	Potato	cytosol	39.75	41.28
Solyc06g007680.1.1	Tomato	cytosol	39.01	39.5
CDY35942	Canola	cytosol	37.28	38.23
Bra029656.1-P	Field mustard	cytosol	36.79	37.72
AT3G07550.2	Thale cress	cytosol	36.79	37.72
CDY28039	Canola	cytosol	36.05	37.44
TraesCS6B01G262900.1	Wheat	cytosol	17.78	17.27
TraesCS3B01G440600.2	Wheat	cytosol	15.56	16.54
TraesCS1B01G275600.1	Wheat	cytosol	14.32	15.3
TraesCS5B01G097800.2	Wheat	cytosol	23.46	14.37
TraesCS5B01G149400.1	Wheat	mitochondrion	22.22	13.2
TraesCS6B01G210700.1	Wheat	cytosol	19.26	12.02
TraesCS5B01G158800.1	Wheat	plastid	15.56	11.95
TraesCS7B01G278800.1	Wheat	cytosol	19.01	11.9
TraesCS3B01G080300.1	Wheat	cytosol	10.12	11.68

Protein Annotations

EnsemblPlants:TraesCS4B01G085300.2	EnsemblPlantsGene:TraesCS4B01G085300	Gene3D:3.80.10.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_Cys-con_subtyp	PANTHER:PTHR33674
PANTHER:PTHR33674:SF6	PFAM:PF13516	SMART:SM00367	SUPFAM:SSF52047	MapMan:35.1	:

Description

No Description!

Coordinates

chr4B:-:85702513..85704057

Molecular Weight (calculated)

43807.3 Da

IEP (calculated)

8.287

GRAVY (calculated)

0.147

Length

405 amino acids

Sequence
(BLAST)

001: MSIGSCGSCG YALNLSSSNR STSDVGSSYQ KSLKKGLISF TSIDLSRFTQ VDEISCFPFL TWRSYRPKTK LLCRKCGSSI GYGYVYKEHA QCLPKMLARS
101: PYLKLISLAG LNELSDSALY EVGVSGTSLQ SFSLYSCSGI TDDGLAQVSI GCPNLVIVEL YRCLNITDLG LESLSKGCHS LKSLNLGYCT AISDRGISSI
201: FRNCRNICAL IISYCRGVSG VGFRGCPSTL SYLEAESCML SPEGMLDISS GGGLQYINLY NLRSSAGLDC LGGVGSMKKL RVLNLRMCRN LTDDSVVAIA
301: SGCPLIEEWS LAVCHGVRLP GWSAIGLNCN KLRILHVNRC RNICDQGLQA LKDGCVRLEV LHIHGCGKIT NNGLALFSIT RPSVKQMVDE AMSIGPSIED
401: LFRLQ

Best Arabidopsis Sequence Match ( AT3G07550.2 )
(BLAST)

001: MEDVSESDNN VETSIIHLPD DCLSFIFQRL DSVADHDSFG LTCHRWLNIQ NISRRSLQFQ CSFSVLNPSS LSQTNPDVSS HHLHRLLTRF QWLEHLSLSG
101: CTVLNDSSLD SLRYPGARLH TLYLDCCFGI SDDGISTIAS FCPNLSVVSL YRCNISDIGL ETLARASLSL KCVNLSYCPL VSDFGIKALS QACLQLESVK
201: ISNCKSITGV GFSGCSPTLG YVDADSCQLE PKGITGIISG GGIEFLNISG VSCYIRKDGL VPIGSGIASK LRILNLRMCR TVGDESIEAI AKGCPLLQEW
301: NLALCHEVKI SGWEAVGKWC RNLKKLHVNR CRNLCDQGLL ALRCGCMNLQ ILYMNGNARL TPTAIEMFRL HRADITLRTE EMMVIGPDWR LYAQE

Arabidopsis Description

FBL12F-box/LRR-repeat protein 12 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRR1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.