Factsheet for TraesCS3B01G080300.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G067800.1	Wheat	cytosol	96.87	96.87
TraesCS3D01G067600.2	Wheat	cytosol	96.01	96.29
HORVU3Hr1G012530.12	Barley	cytosol	94.87	94.87
EES04933	Sorghum	cytosol	81.2	81.66
Os02t0281150-01	Rice	cytosol	81.48	80.34
Zm00001d015974_P002	Maize	cytosol	78.63	77.09
GSMUA_Achr2P17760_001	Banana	cytosol	65.81	65.25
PGSC0003DMT400074998	Potato	cytosol	61.82	62.72
Solyc06g005380.2.1	Tomato	cytosol	61.82	62.72
VIT_08s0007g07030.t01	Wine grape	cytosol	60.68	60.86
CDY06032	Canola	cytosol	60.11	59.77
CDX71945	Canola	cytosol	60.11	59.77
Bra007401.1-P	Field mustard	cytosol	41.6	59.35
AT3G58530.1	Thale cress	cytosol	58.12	57.79
KRH38032	Soybean	cytosol	60.97	56.61
TraesCS6B01G262900.1	Wheat	cytosol	20.8	17.51
TraesCS3B01G440600.2	Wheat	cytosol	16.81	15.49
TraesCS1B01G275600.1	Wheat	cytosol	16.24	15.04
TraesCS5B01G158800.1	Wheat	plastid	20.23	13.47
TraesCS5B01G149400.1	Wheat	mitochondrion	25.64	13.2
TraesCS5B01G097800.2	Wheat	cytosol	24.5	13.01
TraesCS7B01G278800.1	Wheat	cytosol	23.65	12.83
TraesCS6B01G210700.1	Wheat	cytosol	23.65	12.79
TraesCS4B01G085300.2	Wheat	plastid	11.68	10.12

Protein Annotations

EnsemblPlants:TraesCS3B01G080300.1	EnsemblPlantsGene:TraesCS3B01G080300	Gene3D:3.80.10.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	InterPro:IPR001611
InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_Cys-con_subtyp	PANTHER:PTHR44001	PANTHER:PTHR44001:SF1
PFAM:PF13516	SEG:seg	SMART:SM00367	SUPFAM:SSF52047	MapMan:35.1	:

Description

No Description!

Coordinates

chr3B:-:50793918..50798948

Molecular Weight (calculated)

38602.9 Da

IEP (calculated)

6.810

GRAVY (calculated)

0.101

Length

351 amino acids

Sequence
(BLAST)

001: MAAAADEAWC RETVPRVMEL VSPRLPQRDA CALLSVSPWC HRALAANPKL WEVLDLHEMK KAGERLISAL TLARYRHLKV VNLEFAQDIE DRHFLHLKET
101: GAILLEELEL LNLNACQKIS DTGIGAATSL CPNLRALSIY WIVGLTDASI EHAVKNCKQI IDLNLSGCKN ISDRGIQLVA DNYQGLQKLD ITRCIKLTDD
201: ALQKVLEKCS ALESLNMYAL SSFTDKAYTK IGYLANLTFL DLCGAQGSQN LTDDGLSSIS RCGSLTYLNL SWCVRVTDVG VVAIAQGCRS LELLSLFGIL
301: GVTDACLEAL SKSCPNSLTT LDVNGCTGIK RRSRDDLIQL FPRLSCFKVH S

Best Arabidopsis Sequence Match ( AT3G58530.1 )
(BLAST)

001: MEAKKVTEEE EETWRREIVT SVMRLVSTRL PQTDLISLLL VSPWLYRTLI SYPSIWLTIN LREMTNAGDR LLAALSLPRY RQVKHINLEF AQGVVDSHLK
101: LVKTECPDAL LSLEWLNLNV CQKISDNGIE AITSICPKLK VFSIYWNVRV TDAGIRNLVK NCRHITDLNL SGCKSLTDKS MQLVAESYPD LESLNITRCV
201: KITDDGLLQV LQKCFSLQTL NLYALSGFTD KAYMKISLLA DLRFLDICGA QNISDEGIGH IAKCNKLESL NLTWCVRITD AGVNTIANSC TSLEFLSLFG
301: IVGVTDRCLE TLSQTCSTTL TTLDVNGCTG IKRRSREELL QMFPRLTCFK VHS

Arabidopsis Description

F-box protein At3g58530 [Source:UniProtKB/Swiss-Prot;Acc:Q8LB33]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.