Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY35942 | Canola | cytosol | 93.33 | 92.15 |
| AT3G07550.2 | Thale cress | cytosol | 82.05 | 81.01 |
| KRH47976 | Soybean | cytosol | 52.82 | 53.09 |
| PGSC0003DMT400053176 | Potato | cytosol | 52.05 | 52.05 |
| Solyc06g007680.1.1 | Tomato | cytosol | 52.05 | 50.75 |
| GSMUA_Achr8P28940_001 | Banana | cytosol | 46.67 | 47.89 |
| Os11t0264200-01 | Rice | cytosol | 42.05 | 43.04 |
| EES09509 | Sorghum | cytosol | 41.28 | 41.71 |
| HORVU4Hr1G014630.1 | Barley | cytosol | 40.77 | 41.19 |
| TraesCS4D01G083300.1 | Wheat | cytosol | 40.26 | 40.67 |
| Zm00001d007294_P001 | Maize | cytosol | 38.46 | 36.95 |
| TraesCS4B01G085300.2 | Wheat | plastid | 37.44 | 36.05 |
| TraesCS4A01G230600.2 | Wheat | plastid | 37.18 | 35.8 |
| CDX88014 | Canola | cytosol | 21.03 | 20.25 |
| CDY46953 | Canola | cytosol | 20.26 | 19.22 |
| CDY40798 | Canola | cytosol | 20.0 | 18.98 |
| CDY58589 | Canola | extracellular | 5.9 | 17.56 |
| CDY58588 | Canola | extracellular | 5.38 | 15.91 |
| CDY09760 | Canola | cytosol | 25.13 | 15.63 |
| CDX90588 | Canola | cytosol | 25.13 | 15.58 |
| CDX88336 | Canola | cytosol | 12.82 | 15.43 |
| CDX87549 | Canola | cytosol | 13.59 | 14.93 |
| CDX96592 | Canola | cytosol | 13.85 | 14.92 |
| CDY67973 | Canola | plasma membrane | 13.85 | 14.92 |
| CDX88253 | Canola | cytosol | 24.36 | 14.84 |
| CDX79184 | Canola | cytosol | 13.59 | 14.76 |
| CDY53337 | Canola | cytosol | 24.1 | 14.71 |
| CDX80608 | Canola | cytosol | 24.1 | 14.69 |
| CDX80753 | Canola | endoplasmic reticulum | 25.13 | 14.5 |
| CDX68067 | Canola | cytosol | 13.33 | 14.48 |
| CDY19741 | Canola | cytosol | 22.82 | 14.42 |
| CDY11182 | Canola | cytosol, endoplasmic reticulum, nucleus | 24.87 | 14.35 |
| CDX83114 | Canola | cytosol | 18.21 | 14.29 |
| CDY45764 | Canola | cytosol, peroxisome, plastid | 21.03 | 14.07 |
| CDX68575 | Canola | cytosol | 18.21 | 13.89 |
| CDY19807 | Canola | cytosol | 21.79 | 13.8 |
| CDX87090 | Canola | cytosol | 21.79 | 13.8 |
| CDY18646 | Canola | cytosol | 18.21 | 13.55 |
| CDX81326 | Canola | cytosol | 17.95 | 13.36 |
| CDX76980 | Canola | cytosol | 20.26 | 13.19 |
| CDY35358 | Canola | cytosol | 21.03 | 13.16 |
| CDX88173 | Canola | cytosol | 20.77 | 13.02 |
| CDY25663 | Canola | plastid | 16.92 | 12.84 |
| CDX80503 | Canola | cytosol | 20.26 | 12.72 |
| CDY43846 | Canola | plastid | 16.41 | 12.45 |
| CDY29091 | Canola | plastid | 5.38 | 12.14 |
| CDY06032 | Canola | cytosol | 10.77 | 11.9 |
| CDX71945 | Canola | cytosol | 10.77 | 11.9 |
| CDY12824 | Canola | nucleus | 18.72 | 6.7 |
| CDY01426 | Canola | cytosol | 18.46 | 6.65 |
Protein Annotations
| EnsemblPlants:CDY28039 | EnsemblPlantsGene:GSBRNA2T00038979001 | Gene3D:3.80.10.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR001611 | InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | InterPro:Leu-rich_rpt_Cys-con_subtyp | PANTHER:PTHR44001 |
| PANTHER:PTHR44001:SF1 | PFAM:PF13516 | ProteinID:CDY28039 | ProteinID:CDY28039.1 | SEG:seg | SMART:SM00367 |
| SUPFAM:SSF52047 | UniParc:UPI0004EE6BD1 | UniProt:A0A078GSA7 | MapMan:35.1 | : | : |
Description
BnaC05g44410DBnaC05g44410D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GSA7]
Coordinates
chrLK032213:-:359023..360658
Molecular Weight (calculated)
42778.1 Da
IEP (calculated)
7.809
GRAVY (calculated)
0.152
Length
390 amino acids
Sequence
(BLAST)
(BLAST)
001: MENVSMSTSI INLPDDCLSF IYQRLDNLED HDSFGLTCHR FLNIQNINRR SLQFQCSLSL LIPSCLSQTT PAVNSDHLHR LLTRFQWLEH LSLSGCTVLN
101: DSSLASLRYP GARLHSLHLD CCYGVSDDGI STVASFCPNL RVVSLYRCSI SDIGLETLAR ACLCLRCVNL SCCPLVSDFG VKALTQACLQ IESVKISNCK
201: SITGVGFINS SPSLGYVDAE SCQLDPKGIA GIVSGGGVEF LNISGAVSYI GKDGLVPIGS GVASKLRVLN LRMCRTVGDE SIKAIARGCP LLQEWNLALC
301: HEVRVEGWEA VGKWCCSLKK LLVNRCRNLC DQGLLGIRRG CKSLQMLYMN GNARLTATAI EMFKLHRGDV TLRSEEVMVI GPDWRLYTRG
101: DSSLASLRYP GARLHSLHLD CCYGVSDDGI STVASFCPNL RVVSLYRCSI SDIGLETLAR ACLCLRCVNL SCCPLVSDFG VKALTQACLQ IESVKISNCK
201: SITGVGFINS SPSLGYVDAE SCQLDPKGIA GIVSGGGVEF LNISGAVSYI GKDGLVPIGS GVASKLRVLN LRMCRTVGDE SIKAIARGCP LLQEWNLALC
301: HEVRVEGWEA VGKWCCSLKK LLVNRCRNLC DQGLLGIRRG CKSLQMLYMN GNARLTATAI EMFKLHRGDV TLRSEEVMVI GPDWRLYTRG
001: MEDVSESDNN VETSIIHLPD DCLSFIFQRL DSVADHDSFG LTCHRWLNIQ NISRRSLQFQ CSFSVLNPSS LSQTNPDVSS HHLHRLLTRF QWLEHLSLSG
101: CTVLNDSSLD SLRYPGARLH TLYLDCCFGI SDDGISTIAS FCPNLSVVSL YRCNISDIGL ETLARASLSL KCVNLSYCPL VSDFGIKALS QACLQLESVK
201: ISNCKSITGV GFSGCSPTLG YVDADSCQLE PKGITGIISG GGIEFLNISG VSCYIRKDGL VPIGSGIASK LRILNLRMCR TVGDESIEAI AKGCPLLQEW
301: NLALCHEVKI SGWEAVGKWC RNLKKLHVNR CRNLCDQGLL ALRCGCMNLQ ILYMNGNARL TPTAIEMFRL HRADITLRTE EMMVIGPDWR LYAQE
101: CTVLNDSSLD SLRYPGARLH TLYLDCCFGI SDDGISTIAS FCPNLSVVSL YRCNISDIGL ETLARASLSL KCVNLSYCPL VSDFGIKALS QACLQLESVK
201: ISNCKSITGV GFSGCSPTLG YVDADSCQLE PKGITGIISG GGIEFLNISG VSCYIRKDGL VPIGSGIASK LRILNLRMCR TVGDESIEAI AKGCPLLQEW
301: NLALCHEVKI SGWEAVGKWC RNLKKLHVNR CRNLCDQGLL ALRCGCMNLQ ILYMNGNARL TPTAIEMFRL HRADITLRTE EMMVIGPDWR LYAQE
Arabidopsis Description
FBL12F-box/LRR-repeat protein 12 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRR1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.