Factsheet for TraesCS5D01G103900.3

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G091800.2	Wheat	cytosol	98.5	99.24
TraesCS5B01G097800.2	Wheat	cytosol	98.2	98.94
Os12t0552700-01	Rice	cytosol, peroxisome	48.95	87.4
Zm00001d041635_P002	Maize	cytosol	84.83	85.22
KXG23663	Sorghum	cytosol	84.68	85.2
Zm00001d023825_P001	Maize	cytosol	83.33	84.09
HORVU5Hr1G024060.1	Barley	cytosol, plastid	97.3	76.87
GSMUA_Achr11P...	Banana	cytosol	60.36	61.28
GSMUA_Achr6P20450_001	Banana	cytosol	60.36	60.91
KRH68483	Soybean	cytosol	50.3	52.26
VIT_14s0060g01970.t01	Wine grape	cytosol, plastid	50.45	52.26
KRG96764	Soybean	cytosol	50.0	51.95
CDX88253	Canola	cytosol	47.9	49.84
Bra009931.1-P	Field mustard	cytosol	47.75	49.69
CDX80608	Canola	cytosol	47.6	49.53
CDY19741	Canola	cytosol	45.35	48.95
Bra036607.1-P	Field mustard	cytosol	46.85	48.83
AT5G27920.1	Thale cress	cytosol, extracellular, peroxisome	47.0	48.75
CDY53337	Canola	cytosol	46.7	48.67
PGSC0003DMT400063732	Potato	cytosol	46.25	48.05
Solyc01g099970.2.1	Tomato	extracellular	44.44	47.82
TraesCS5D01G155900.1	Wheat	mitochondrion	37.54	36.08
TraesCS6D01G216400.1	Wheat	cytosol	19.22	30.7
TraesCS4D01G148000.1	Wheat	cytosol	26.13	27.84
TraesCS4D01G083300.1	Wheat	cytosol	14.11	24.35
TraesCS3D01G067600.2	Wheat	cytosol	12.76	24.29
TraesCS6D01G169200.1	Wheat	cytosol	22.97	23.57
TraesCS7D01G373800.1	Wheat	cytosol	22.67	23.2
TraesCS1D01G265100.1	Wheat	cytosol	12.61	22.7
TraesCS3D01G402900.2	Wheat	cytosol	12.46	21.84
TraesCS2D01G358900.1	Wheat	mitochondrion, plastid	12.31	18.59
TraesCS5D01G166300.1	Wheat	cytosol, mitochondrion, peroxisome, plastid	14.56	18.41

Protein Annotations

EnsemblPlants:TraesCS5D01G103900.3	EnsemblPlantsGene:TraesCS5D01G103900	Gene3D:3.80.10.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_Cys-con_subtyp	PANTHER:PTHR44309
PANTHER:PTHR44309:SF2	PFAM:PF13516	SEG:seg	SMART:SM00367	SUPFAM:SSF52047	MapMan:35.1

Description

No Description!

Coordinates

chr5D:-:117739982..117744615

Molecular Weight (calculated)

71615.4 Da

IEP (calculated)

6.895

GRAVY (calculated)

0.221

Length

666 amino acids

Sequence
(BLAST)

001: MSEEEAQRYG GGTGGGGVGA LSVDLLGQVL DRVLERRDRK ACRLVSRAFA RAEAAHRRAL RVLRREPLPR LLRAFPALER LDLSACASLD DASLAAALAG
101: ADLGTVRQVC LARASGVGWR GLEALVAACP RLEAVDLSHC VGAGDREAAA LAAASGLREL NLEKCLGVTD MGLAKVAVGC PRLENLSFKW CREISDIGVD
201: LLVKKCRELR SLDISYLKVS NESLRSISTL EKLEELAMVA CSCIDDEGLE LLSRGSNSLQ SVDVSRCDHV TSQGLASLID GHSFLQKLYA ADSLHEIGQD
301: FLSKLVTLKA TLAVLRLDGF EVSSSLLSAI GEGCTNLVEI GLSKCNGVTD EGISSLVACC SYLRTIDLTC CNLVTNNSLD SIADNCKLLE CLRLESCSSI
401: NEKGLERIAS CCPNLKEIDL TDCGVNDEVN SLAALHHLAK CSELLILKLG LSSSISDKGL GFISSKCGKL IELDLYRCSS ITDDGLAALA NGCKKIKLLN
501: LCYCNKITDS GLSHLGALEE LTNLELRCLV RITGIGISSV VTGCKSLVEL DLKRCYSVDD SGLWALARYA LNLRQLTISY CQVTGLGLCH LLSSLRCLQD
601: VKMVHLSWVS IEGFEMALRA ACGRLKKLKI LSGLKTVLSP DLLQLLQACG CRIRWVNKPL VYKDAI

Best Arabidopsis Sequence Match ( AT5G27920.1 )
(BLAST)

001: MSTSPSILSV LSEDLLVRVY ECLDPPCRKT WRLISKDFLR VDSLTRTTIR ILRVEFLPTL LFKYPNLSSL DLSVCPKLDD DVVLRLALDG AISTLGIKSL
101: NLSRSTAVRA RGLETLARMC HALERVDVSH CWGFGDREAA ALSSATGLRE LKMDKCLSLS DVGLARIVVG CSNLNKISLK WCMEISDLGI DLLCKICKGL
201: KSLDVSYLKI TNDSIRSIAL LVKLEVLDMV SCPLIDDGGL QFLENGSPSL QEVDVTRCDR VSLSGLISIV RGHPDIQLLK ASHCVSEVSG SFLKYIKGLK
301: HLKTIWIDGA HVSDSSLVSL SSSCRSLMEI GLSRCVDVTD IGMISLARNC LNLKTLNLAC CGFVTDVAIS AVAQSCRNLG TLKLESCHLI TEKGLQSLGC
401: YSMLVQELDL TDCYGVNDRG LEYISKCSNL QRLKLGLCTN ISDKGIFHIG SKCSKLLELD LYRCAGFGDD GLAALSRGCK SLNRLILSYC CELTDTGVEQ
501: IRQLELLSHL ELRGLKNITG VGLAAIASGC KKLGYLDVKL CENIDDSGFW ALAYFSKNLR QINLCNCSVS DTALCMLMSN LSRVQDVDLV HLSRVTVEGF
601: EFALRACCNR LKKLKLLAPL RFLLSSELLE TLHARGCRIR WD

Arabidopsis Description

At5g27920 [Source:UniProtKB/TrEMBL;Acc:Q8GZ31]
SUBAcon: [peroxisome,extracellular,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.