Factsheet for TraesCS4D01G148000.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G142500.3	Wheat	plastid	93.92	93.32
Zm00001d007640_P001	Maize	cytosol	74.56	74.2
EES08900	Sorghum	cytosol	74.24	73.07
Os11t0641200-01	Rice	cytosol	39.84	69.55
GSMUA_Achr3P22880_001	Banana	cytosol	55.52	54.22
VIT_05s0020g02400.t01	Wine grape	cytosol	50.72	51.88
KRH02152	Soybean	cytosol	48.0	51.37
KRH20947	Soybean	cytosol, nucleus, peroxisome	48.64	50.08
PGSC0003DMT400079115	Potato	cytosol	48.0	49.42
AT4G15475.1	Thale cress	cytosol	48.0	49.18
Solyc06g054440.2.1	Tomato	mitochondrion	42.08	49.16
Bra012785.1-P	Field mustard	cytosol	47.84	47.61
CDY09760	Canola	cytosol	47.68	47.53
CDX90588	Canola	cytosol	47.68	47.38
KRH11333	Soybean	cytosol	28.8	46.04
KRH50979	Soybean	cytosol	23.84	42.45
TraesCS6D01G216400.1	Wheat	cytosol	17.76	26.62
TraesCS3D01G067600.2	Wheat	cytosol	14.72	26.29
TraesCS5D01G103900.3	Wheat	cytosol	27.84	26.13
TraesCS5D01G155900.1	Wheat	mitochondrion	27.04	24.39
TraesCS3D01G402900.2	Wheat	cytosol	14.56	23.95
TraesCS1D01G265100.1	Wheat	cytosol	13.92	23.51
TraesCS4D01G083300.1	Wheat	cytosol	14.24	23.06
TraesCS7D01G373800.1	Wheat	cytosol	23.2	22.27
TraesCS6D01G169200.1	Wheat	cytosol	22.88	22.03
TraesCS2D01G358900.1	Wheat	mitochondrion, plastid	14.08	19.95
TraesCS5D01G166300.1	Wheat	cytosol, mitochondrion, peroxisome, plastid	16.16	19.17

Protein Annotations

EnsemblPlants:TraesCS4D01G148000.1	EnsemblPlantsGene:TraesCS4D01G148000	Gene3D:1.20.1280.50	Gene3D:3.80.10.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:F-box-like_dom_sf	InterPro:F-box_dom	InterPro:IPR001611	InterPro:IPR001810	InterPro:IPR032675
InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_Cys-con_subtyp	PANTHER:PTHR45517	PFAM:PF12937	PFAM:PF13516
SEG:seg	SMART:SM00367	SUPFAM:SSF52047	SUPFAM:SSF81383	MapMan:35.1	:

Description

No Description!

Coordinates

chr4D:-:144883181..144896826

Molecular Weight (calculated)

67093.2 Da

IEP (calculated)

7.615

GRAVY (calculated)

0.206

Length

625 amino acids

Sequence
(BLAST)

001: MKGADLINVA LPEELLEDVL RRVGGEKRDL DACALVCRRW RRLDRATRRS AKLPASGVHA DEVVGLFVER FPALADVSID ERLSADAAVV SAPASRSRRH
101: VISSIPSGSR RRMSPVPRFA GILFPLPSEQ TPSADGIESF CLTDVGLTSL ARGCKGLEKL SLVWCSAISS TGLVRVAENC KKLASLDIQA CYIGDPGLVA
201: IGEGCNLLNN LSLRFVEGAT DEGLIGLIKS CGQSLLSLGI ANCAWMTDAS LRAVGSHCPN LEILSLESEL VKNEGVISIA KGCRLLKNLK LQCIGAGDEA
301: LEAIGSCCSL LEILSLNNFE RFTDRSLSSI AKGCKNLTDL VLNDCLLLTD RSLEFVARSC KKIARLKING CQNMETAALE HIGRWCPGLL ELSLIYCPRV
401: RDTAFLELGK GCTLLQSLYL VDCSRIGDDA MCHIAQGCKY LKEISIRRGY EVGDKALISI AENCKSLKEL TLQFCERVSD TGLAAIAEGC SLQKLNLCGC
501: QLITDNGLAA IARGCGDLVF LDISVLPMTG DMGLAEIGQG CPQIKDIALS HCPGVTDVGL GHLVRGCLQL QSCQLVYCKR VTSTGVAIVV SSCSRLKKLL
601: VEEAKVSERT RRRAGPILSF LCSGL

Best Arabidopsis Sequence Match ( AT4G15475.1 )
(BLAST)

001: MRGHDRINNC LPEELILEIF RRLESKPNRD ACSLVCKRWL SLERFSRTTL RIGASFSPDD FISLLSRRFL YITSIHVDER ISVSLPSLSP SPKRKRGRDS
101: SSPSSSKRKK LTDKTHSGAE NVESSSLTDT GLTALANGFP RIENLSLIWC PNVSSVGLCS LAQKCTSLKS LDLQGCYVGD QGLAAVGKFC KQLEELNLRF
201: CEGLTDVGVI DLVVGCSKSL KSIGVAASAK ITDLSLEAVG SHCKLLEVLY LDSEYIHDKG LIAVAQGCHR LKNLKLQCVS VTDVAFAAVG ELCTSLERLA
301: LYSFQHFTDK GMRAIGKGSK KLKDLTLSDC YFVSCKGLEA IAHGCKELER VEINGCHNIG TRGIEAIGKS CPRLKELALL YCQRIGNSAL QEIGKGCKSL
401: EILHLVDCSG IGDIAMCSIA KGCRNLKKLH IRRCYEIGNK GIISIGKHCK SLTELSLRFC DKVGNKALIA IGKGCSLQQL NVSGCNQISD AGITAIARGC
501: PQLTHLDISV LQNIGDMPLA ELGEGCPMLK DLVLSHCHHI TDNGLNHLVQ KCKLLETCHM VYCPGITSAG VATVVSSCPH IKKVLIEKWK VTERTTRRAG
601: SVISYLCMDL

Arabidopsis Description

FBL4F-box/LRR-repeat protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9C5D2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.