Factsheet for HORVU5Hr1G047420.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, cytosol

Predictor Summary:

cytosol 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, plastid
Any Predictor:	cytosol, mitochondrion, plastid
MultiLoc:	cytosol
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G150800.2	Wheat	mitochondrion	95.41	94.43
TraesCS5B01G149400.1	Wheat	mitochondrion	94.81	93.84
TraesCS5D01G155900.1	Wheat	mitochondrion	92.44	90.04
Zm00001d044622_P002	Maize	mitochondrion	79.11	75.85
EES07863	Sorghum	nucleus	76.59	74.82
KXG22793	Sorghum	nucleus	76.89	74.57
Os12t0108500-01	Rice	cytosol, plasma membrane, plastid	76.44	74.03
Zm00001d005072_P003	Maize	mitochondrion	75.41	70.21
Os11t0108932-01	Rice	nucleus	32.44	70.19
GSMUA_Achr10P...	Banana	cytosol, nucleus, peroxisome	57.78	54.62
GSMUA_Achr7P22290_001	Banana	cytosol	57.33	54.05
VIT_08s0058g00700.t01	Wine grape	cytosol	51.41	52.34
PGSC0003DMT400030966	Potato	cytosol, plasma membrane, plastid	50.81	51.58
Solyc10g076290.1.1	Tomato	cytosol	50.52	50.52
KRH76059	Soybean	cytosol, nucleus, peroxisome	50.07	50.37
VIT_06s0004g07520.t01	Wine grape	cytosol	48.74	49.7
KRH17127	Soybean	cytosol	47.11	48.77
AT5G01720.1	Thale cress	vacuole	47.85	48.57
KRH65525	Soybean	cytosol, peroxisome, plastid	50.52	48.16
Bra005669.1-P	Field mustard	cytosol	47.41	47.9
CDY11182	Canola	cytosol, endoplasmic reticulum, nucleus	47.56	47.49
CDX80753	Canola	endoplasmic reticulum	47.11	47.04
KRH72766	Soybean	cytosol	35.85	44.98
HORVU5Hr1G024060.1	Barley	cytosol, plastid	37.63	30.13
HORVU6Hr1G059950.1	Barley	cytosol	16.59	26.86
HORVU3Hr1G012530.12	Barley	cytosol	13.04	25.07
HORVU4Hr1G014630.1	Barley	cytosol	13.48	23.58
HORVU7Hr1G090240.1	Barley	cytosol	17.19	21.52
HORVU1Hr1G065030.2	Barley	cytosol	11.7	20.84
HORVU6Hr1G038430.3	Barley	plastid	20.15	20.83
HORVU5Hr1G050420.1	Barley	plastid	16.59	20.29
HORVU3Hr1G091200.4	Barley	cytosol	11.56	18.57
HORVU0Hr1G005070.1	Barley	plastid	15.26	18.46
HORVU1Hr1G089690.1	Barley	cytosol, extracellular, mitochondrion	7.26	18.42
HORVU5Hr1G029670.1	Barley	mitochondrion	13.33	17.54
HORVU5Hr1G000950.4	Barley	plastid	10.52	15.88

Protein Annotations

EnsemblPlants:HORVU5Hr1G047420.2	EnsemblPlantsGene:HORVU5Hr1G047420	Gene3D:3.80.10.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_Cys-con_subtyp	PANTHER:PTHR44309
PANTHER:PTHR44309:SF3	PFAM:PF13516	SEG:seg	SMART:SM00367	SUPFAM:SSF52047	UniParc:UPI000B47ED11
UniProt:A0A287R2Q3	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chrchr5H:+:368407211..368411089

Molecular Weight (calculated)

72754.6 Da

IEP (calculated)

8.071

GRAVY (calculated)

0.238

Length

675 amino acids

Sequence
(BLAST)

001: MAMATHSHLP KRRRVCPAAG APIDELPDEL LFLVLDRVAA ADPRALKSFA LASRACHAAE SRHRRVLRPY RADLLRAALA RYPTAARLDL TLCARVPGAA
101: LSSAPVPSLR AVDLSRSRGF GAPGLAALVA ACPALADLDL SNGVDLGDAA AAELARARGL QRLCLSRCKP ITDMGLGCIA VGCPDLRDLT LNWCLGITDL
201: GIQLLALKCN KLRNLHLSYT MISKDCLPAI MKLPNLEVLA LVGCVGIDDD ALSGLENESS KSLRVLDMST CRNVTHTGVS SVVKAVPNLL ELNLSYCCNV
301: TASMGKCFQM LPKLQTLKLE GCKFMADGLK HIGISCVSLR ELSLSKCSGV TDTDLSFVVS RLKNLLKLDI TCNRNITDVS LAAITSSCHS LISLRIESCS
401: HFSSEGLRLI GKRCCHLEEL DITDSDLDDE GLKALSGCSK LSSLKIGICM RISDQGLIHI GKSCPELRDI DLYRSGGISD EGVTQIAQGC PMLESINLSY
501: CTEITDVSLM SLSKCAKLNT LEIRGCPSIS SAGLSEIAIG CRLLAKLDVK KCFAINDVGM FFLSQFSHSL RQINLSYCSV TDIGLLSLSS ICGLQNMTIV
601: HLAGITPNGL LAALMVSGGL TRVKLHAAFR SMMPPHMLKV VEARGCAFQW IDKPFKVEQE RCDIWQQQSR DVLVR

Best Arabidopsis Sequence Match ( AT5G01720.1 )
(BLAST)

001: MKKVKQIRVL KPFDLLSEEL VFIILDLISP NPSDLKSFSL TCKSFYQLES KHRGSLKPLR SDYLPRILTR YRNTTDLDLT FCPRVTDYAL SVVGCLSGPT
101: LRSLDLSRSG SFSAAGLLRL ALKCVNLVEI DLSNATEMRD ADAAVVAEAR SLERLKLGRC KMLTDMGIGC IAVGCKKLNT VSLKWCVGVG DLGVGLLAVK
201: CKDIRTLDLS YLPITGKCLH DILKLQHLEE LLLEGCFGVD DDSLKSLRHD CKSLKKLDAS SCQNLTHRGL TSLLSGAGYL QRLDLSHCSS VISLDFASSL
301: KKVSALQSIR LDGCSVTPDG LKAIGTLCNS LKEVSLSKCV SVTDEGLSSL VMKLKDLRKL DITCCRKLSR VSITQIANSC PLLVSLKMES CSLVSREAFW
401: LIGQKCRLLE ELDLTDNEID DEGLKSISSC LSLSSLKLGI CLNITDKGLS YIGMGCSNLR ELDLYRSVGI TDVGISTIAQ GCIHLETINI SYCQDITDKS
501: LVSLSKCSLL QTFESRGCPN ITSQGLAAIA VRCKRLAKVD LKKCPSINDA GLLALAHFSQ NLKQINVSDT AVTEVGLLSL ANIGCLQNIA VVNSSGLRPS
601: GVAAALLGCG GLRKAKLHAS LRSLLPLSLI HHLEARGCAF LWKDNTLQAE LDPKYWKQQL EEMAP

Arabidopsis Description

FBL3F-box/LRR-repeat protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWU5]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.