Factsheet for Bra005669.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 2
nucleus 2
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	plastid
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY11182	Canola	cytosol, endoplasmic reticulum, nucleus	99.55	98.37
AT5G01720.1	Thale cress	vacuole	86.23	86.62
VIT_08s0058g00700.t01	Wine grape	cytosol	63.47	63.95
KRH76059	Soybean	cytosol, nucleus, peroxisome	61.68	61.4
PGSC0003DMT400030966	Potato	cytosol, plasma membrane, plastid	60.93	61.2
Solyc10g076290.1.1	Tomato	cytosol	61.38	60.74
KRH65525	Soybean	cytosol, peroxisome, plastid	62.87	59.32
GSMUA_Achr10P...	Banana	cytosol, nucleus, peroxisome	54.79	51.26
GSMUA_Achr7P22290_001	Banana	cytosol	53.89	50.28
KXG22793	Sorghum	nucleus	51.35	49.28
EES07863	Sorghum	nucleus	50.3	48.63
Zm00001d044622_P002	Maize	mitochondrion	51.2	48.58
TraesCS5A01G150800.2	Wheat	mitochondrion	49.4	48.39
Os12t0108500-01	Rice	cytosol, plasma membrane, plastid	50.0	47.92
TraesCS5B01G149400.1	Wheat	mitochondrion	48.65	47.65
HORVU5Hr1G047420.2	Barley	cytosol, mitochondrion, plastid	47.9	47.41
TraesCS5D01G155900.1	Wheat	mitochondrion	48.35	46.61
Zm00001d005072_P003	Maize	mitochondrion	50.45	46.48
Os11t0108932-01	Rice	nucleus	21.11	45.19
Bra036607.1-P	Field mustard	cytosol	35.63	37.25
Bra009931.1-P	Field mustard	cytosol	35.48	37.03
Bra009671.1-P	Field mustard	cytosol	16.62	27.41
Bra029367.1-P	Field mustard	cytosol	16.77	27.25
Bra012785.1-P	Field mustard	cytosol	23.65	25.16
Bra015699.1-P	Field mustard	cytosol	13.32	25.14
Bra007401.1-P	Field mustard	cytosol	9.13	24.8
Bra003692.1-P	Field mustard	cytosol	13.32	24.79
Bra016422.1-P	Field mustard	cytosol	12.72	24.08
Bra029656.1-P	Field mustard	cytosol	14.22	24.05
Bra034254.1-P	Field mustard	cytosol	21.56	23.15
Bra009835.1-P	Field mustard	cytosol	21.26	22.83
Bra036542.1-P	Field mustard	cytosol	20.51	22.24
Bra032213.1-P	Field mustard	plastid	16.02	20.82
Bra029994.1-P	Field mustard	cytosol	15.42	20.16
Bra037120.1-P	Field mustard	cytosol	14.37	18.25

Protein Annotations

EnsemblPlants:Bra005669.1	EnsemblPlants:Bra005669.1-P	EnsemblPlantsGene:Bra005669	Gene3D:3.80.10.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_Cys-con_subtyp
PANTHER:PTHR44309	PANTHER:PTHR44309:SF3	PFAM:PF13516	SEG:seg	SMART:SM00367	SUPFAM:SSF52047
UniParc:UPI000253F9C3	UniProt:M4CN81	MapMan:35.1	:	:	:

Description

AT5G01720 (E=7e-294) | F-box family protein (FBL3)

Coordinates

chrA03:+:64870..67394

Molecular Weight (calculated)

72649.0 Da

IEP (calculated)

8.382

GRAVY (calculated)

0.158

Length

668 amino acids

Sequence
(BLAST)

001: MKKAKQIQHM ISKPFDLLSE ELVFIILDLV AQNPSDLKSF SLTCKWFYQV EARHRRSLKP LRAEYLPRIL TRYRNTADLD LSFCPRVTDY ALSVVGCLSG
101: PTLRSVDLSR SFSFSAAGLL RLAVKCVSLV EIDLSNATEM RDAAAAVVAE AKSLERLKLG RCKKLTDMGI GCIAVGCRKL KRVSLKWCVG VGDLGVGLLA
201: VKCKDIRSLD LSYLPITGKC LHDVLKLQHL EELLLQGCFG VDDDSLKSLT HHCNSLKNLD ASSCQNLTQR GLTSLLSGAG CLERLDLAHS SSVISLDFAS
301: SLNKVSSALQ SIRLDGCAVT CDGLKAIGTL CISLREVSLS KCVTVTDEGL SCLVMKLKDL RKLDITCCRK LTGVSITQVA SSCPLLVSLK MESCSLVSRD
401: AFWLIGHKCR LLEELDFTDN EIDDEGLKSI SSCRSLSSLK LGICLNITDR GLSYIGMGCS NLRELDLYRS VGITDVGISS IAQGCCHLET INISYCKDIT
501: DKSLVSLSKC SMLQTFESRG CPHITCQGLA AIAVRCKRLS KLDLKKCPFI NDSGLLTLAH FSQGLKQISV SETGVTDVGL VSLANIGCLQ NIAAVNTRGL
601: SPSGVAAALV GCGGLRKVKL HASLRSLLPS SLINHMEARG CSFLWKDYNN HNNSNTLQAE LDPKYWKV

Best Arabidopsis Sequence Match ( AT5G01720.1 )
(BLAST)

001: MKKVKQIRVL KPFDLLSEEL VFIILDLISP NPSDLKSFSL TCKSFYQLES KHRGSLKPLR SDYLPRILTR YRNTTDLDLT FCPRVTDYAL SVVGCLSGPT
101: LRSLDLSRSG SFSAAGLLRL ALKCVNLVEI DLSNATEMRD ADAAVVAEAR SLERLKLGRC KMLTDMGIGC IAVGCKKLNT VSLKWCVGVG DLGVGLLAVK
201: CKDIRTLDLS YLPITGKCLH DILKLQHLEE LLLEGCFGVD DDSLKSLRHD CKSLKKLDAS SCQNLTHRGL TSLLSGAGYL QRLDLSHCSS VISLDFASSL
301: KKVSALQSIR LDGCSVTPDG LKAIGTLCNS LKEVSLSKCV SVTDEGLSSL VMKLKDLRKL DITCCRKLSR VSITQIANSC PLLVSLKMES CSLVSREAFW
401: LIGQKCRLLE ELDLTDNEID DEGLKSISSC LSLSSLKLGI CLNITDKGLS YIGMGCSNLR ELDLYRSVGI TDVGISTIAQ GCIHLETINI SYCQDITDKS
501: LVSLSKCSLL QTFESRGCPN ITSQGLAAIA VRCKRLAKVD LKKCPSINDA GLLALAHFSQ NLKQINVSDT AVTEVGLLSL ANIGCLQNIA VVNSSGLRPS
601: GVAAALLGCG GLRKAKLHAS LRSLLPLSLI HHLEARGCAF LWKDNTLQAE LDPKYWKQQL EEMAP

Arabidopsis Description

FBL3F-box/LRR-repeat protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWU5]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.