Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
KRH15905 | Soybean | cytosol | 93.87 | 94.88 |
KRH64574 | Soybean | cytosol | 74.93 | 87.54 |
KRH53355 | Soybean | cytosol | 84.8 | 85.48 |
CDX88336 | Canola | cytosol | 66.13 | 76.54 |
Bra015699.1-P | Field mustard | cytosol | 70.13 | 74.29 |
CDX87549 | Canola | cytosol | 70.13 | 74.08 |
CDX79184 | Canola | cytosol | 70.67 | 73.82 |
PGSC0003DMT400063955 | Potato | cytosol, extracellular, nucleus | 66.67 | 73.31 |
Bra003692.1-P | Field mustard | cytosol | 69.87 | 72.98 |
AT1G77000.1 | Thale cress | cytosol | 69.87 | 72.78 |
CDX68067 | Canola | cytosol | 69.33 | 72.42 |
AT1G21410.1 | Thale cress | cytosol | 69.33 | 72.22 |
Bra016422.1-P | Field mustard | cytosol | 67.47 | 71.67 |
Solyc04g063380.2.1 | Tomato | cytosol | 68.53 | 70.6 |
CDX96592 | Canola | cytosol | 68.0 | 70.44 |
CDY67973 | Canola | plasma membrane | 67.47 | 69.89 |
CDY58589 | Canola | extracellular | 23.73 | 67.94 |
CDY58588 | Canola | extracellular | 23.2 | 65.91 |
GSMUA_Achr10P... | Banana | cytosol | 61.6 | 65.07 |
GSMUA_AchrUn_... | Banana | cytosol | 62.93 | 64.13 |
VIT_18s0001g15010.t01 | Wine grape | mitochondrion | 72.0 | 63.08 |
GSMUA_Achr6P18620_001 | Banana | cytosol | 61.6 | 62.94 |
Zm00001d038224_P004 | Maize | cytosol | 61.6 | 62.77 |
EES18256 | Sorghum | cytosol, nucleus, plastid | 61.33 | 62.33 |
Os05t0425700-01 | Rice | cytosol | 62.13 | 61.97 |
TraesCS1A01G264900.1 | Wheat | cytosol | 61.07 | 61.89 |
TraesCS1D01G265100.1 | Wheat | cytosol | 60.53 | 61.35 |
HORVU1Hr1G065030.2 | Barley | cytosol | 61.6 | 60.95 |
TraesCS1B01G275600.1 | Wheat | cytosol | 61.6 | 60.95 |
Os01t0881900-01 | Rice | cytosol | 61.33 | 60.69 |
TraesCS3D01G402900.2 | Wheat | cytosol | 61.07 | 60.26 |
TraesCS3A01G407700.1 | Wheat | cytosol | 61.07 | 60.26 |
TraesCS3B01G440600.2 | Wheat | cytosol | 60.8 | 59.84 |
EES03986 | Sorghum | cytosol | 60.53 | 59.58 |
HORVU3Hr1G091200.4 | Barley | cytosol | 60.0 | 53.57 |
Zm00001d000224_P001 | Maize | cytosol | 60.53 | 52.42 |
KRG90608 | Soybean | cytosol | 22.4 | 20.1 |
KRH36149 | Soybean | cytosol | 22.13 | 19.81 |
KRH50979 | Soybean | cytosol | 16.8 | 17.95 |
KRH16153 | Soybean | cytosol | 11.2 | 16.94 |
KRH52037 | Soybean | cytosol | 17.07 | 15.84 |
KRH02152 | Soybean | cytosol | 24.0 | 15.41 |
KRH38032 | Soybean | cytosol | 15.47 | 15.34 |
KRH11333 | Soybean | cytosol | 15.73 | 15.09 |
KRH05167 | Soybean | cytosol | 23.73 | 14.59 |
KRH72766 | Soybean | cytosol | 20.8 | 14.5 |
KRH20947 | Soybean | cytosol, nucleus, peroxisome | 23.47 | 14.5 |
KRH15886 | Soybean | cytosol | 24.27 | 14.13 |
KRG96764 | Soybean | cytosol | 23.73 | 13.88 |
KRH52439 | Soybean | cytosol, nucleus, peroxisome | 23.47 | 13.79 |
KRH03688 | Soybean | cytosol | 23.47 | 13.77 |
KRH68483 | Soybean | cytosol | 23.47 | 13.73 |
KRH61771 | Soybean | cytosol | 23.2 | 13.68 |
KRH47976 | Soybean | cytosol | 14.13 | 13.66 |
KRH76059 | Soybean | cytosol, nucleus, peroxisome | 24.27 | 13.56 |
KRH20255 | Soybean | cytosol | 22.93 | 13.46 |
KRH65525 | Soybean | cytosol, peroxisome, plastid | 25.33 | 13.42 |
KRH62989 | Soybean | cytosol | 21.87 | 12.62 |
KRH17127 | Soybean | cytosol | 21.6 | 12.42 |
KRH77049 | Soybean | cytosol | 16.8 | 12.07 |
KRH04530 | Soybean | cytosol | 17.33 | 12.06 |
KRH28425 | Soybean | cytosol | 16.8 | 11.98 |
KRH15408 | Soybean | plastid | 17.33 | 11.84 |
KRH05631 | Soybean | plastid | 17.6 | 11.72 |
KRH57971 | Soybean | cytosol | 17.33 | 11.63 |
KRH04870 | Soybean | cytosol | 8.27 | 11.4 |
KRH61346 | Soybean | cytosol | 15.73 | 8.45 |
Protein Annotations
EntrezGene:100788845 | MapMan:19.2.2.8.1.4.1 | Gene3D:3.80.10.10 | EMBL:ACUP02008028 | InterPro:F-box-like_dom_sf | InterPro:F-box_dom |
EnsemblPlantsGene:GLYMA_13G036600 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | UniProt:I1LXB5 | InterPro:IPR001611 |
InterPro:IPR001810 | InterPro:IPR032675 | ProteinID:KRH18089.1 | EnsemblPlants:KRH18090 | ProteinID:KRH18090 | ProteinID:KRH18090.1 |
InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | InterPro:Leu-rich_rpt_Cys-con_subtyp | PFAM:PF12937 | PFAM:PF13516 | PANTHER:PTHR44673 |
PANTHER:PTHR44673:SF1 | SMART:SM00367 | SUPFAM:SSF52047 | SUPFAM:SSF81383 | UniParc:UPI000233BD66 | SEG:seg |
Description
hypothetical protein
Coordinates
chr13:+:11468489..11472883
Molecular Weight (calculated)
40967.6 Da
IEP (calculated)
7.144
GRAVY (calculated)
0.101
Length
375 amino acids
Sequence
(BLAST)
(BLAST)
001: MVGKESLRTH EVLNFSFEKL MMVDCGGNSG KGVNFKAGVI TEWKDIPVEL LMQILSLVDD QTVMIASEVC RGWREAICFG LTRLSLSWCS KNMNNLVLSL
101: APKFTKLQTL ILRQDKPQLE DNAVETISNF CHDLQILDLS KSFKLTDHSL YAIALGCQDL TKLNISGCSA FSDNALAYLA SFCRKLKVLN LCGCVKAASD
201: TALQAIGHYC NQLQFLNLGW CENVSDVGVM SLAYGCRDLR TLDLCGCVLI TDDSVIALAN RCPHLRSLGL YFCQNITDRA MYSLAQSKVN NRMWGSMKGG
301: GNNDDNDDGL RTLNISQCTA LTPSAVQAVC DSCPSLHTCS GRHSLIMSGC LNLTSVHCAC AGQAHRAFTL PHAAH
101: APKFTKLQTL ILRQDKPQLE DNAVETISNF CHDLQILDLS KSFKLTDHSL YAIALGCQDL TKLNISGCSA FSDNALAYLA SFCRKLKVLN LCGCVKAASD
201: TALQAIGHYC NQLQFLNLGW CENVSDVGVM SLAYGCRDLR TLDLCGCVLI TDDSVIALAN RCPHLRSLGL YFCQNITDRA MYSLAQSKVN NRMWGSMKGG
301: GNNDDNDDGL RTLNISQCTA LTPSAVQAVC DSCPSLHTCS GRHSLIMSGC LNLTSVHCAC AGQAHRAFTL PHAAH
001: MVMGGEASME LDQCFQKMKM EGISIKEWKD IPVELLMRIL SLVDDRNVIV ASGVCTGWRD AISFGLTRLR LSWCNNNMNS LVLSLVPKFV KLQTLNLRQD
101: KPQLEDNAVE AIANHCHELQ ELDLSKSLKI TDRSLYALAH GCPDLTKLNL SGCTSFSDTA IAYLTRFCRK LKVLNLCGCV KAVTDNALEA IGNNCNQMQS
201: LNLGWCENIS DDGVMSLAYG CPDLRTLDLC GCVLITDESV VALADWCVHL RSLGLYYCRN ITDRAMYSLA QSGVKNKPGS WKSVKKGKYD EEGLRSLNIS
301: QCTALTPSAV QAVCDSFPAL HTCSGRHSLV MSGCLNLTTV HCACILQAHR AHNAVPHPAH
101: KPQLEDNAVE AIANHCHELQ ELDLSKSLKI TDRSLYALAH GCPDLTKLNL SGCTSFSDTA IAYLTRFCRK LKVLNLCGCV KAVTDNALEA IGNNCNQMQS
201: LNLGWCENIS DDGVMSLAYG CPDLRTLDLC GCVLITDESV VALADWCVHL RSLGLYYCRN ITDRAMYSLA QSGVKNKPGS WKSVKKGKYD EEGLRSLNIS
301: QCTALTPSAV QAVCDSFPAL HTCSGRHSLV MSGCLNLTTV HCACILQAHR AHNAVPHPAH
Arabidopsis Description
SKP2AF-box protein SKP2A [Source:UniProtKB/Swiss-Prot;Acc:Q9LPL4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.