CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH77049	Soybean	cytosol	92.78	93.49
KRH04530	Soybean	cytosol	65.78	64.19
KRH57971	Soybean	cytosol	64.83	61.0
AT5G67250.1	Thale cress	cytosol	57.41	57.31
CDX81326	Canola	cytosol	56.08	56.3
CDY18646	Canola	cytosol	56.08	56.3
CDX83114	Canola	cytosol	52.85	55.94
Bra037120.1-P	Field mustard	cytosol	55.89	55.89
Bra029994.1-P	Field mustard	cytosol	53.8	55.38
CDX68575	Canola	cytosol	52.85	54.4
KRH15408	Soybean	plastid	56.08	53.73
AT3G50080.1	Thale cress	cytosol	53.04	53.45
VIT_07s0129g01110.t01	Wine grape	plastid	56.65	52.93
PGSC0003DMT400064250	Potato	mitochondrion	55.13	52.73
PGSC0003DMT400053918	Potato	cytosol	54.94	52.64
KRH05631	Soybean	plastid	56.08	52.4
Solyc02g092990.1.1	Tomato	plastid	54.75	52.36
Solyc03g044220.1.1	Tomato	cytosol	54.37	52.09
GSMUA_Achr3P28280_001	Banana	plastid	47.34	50.51
GSMUA_Achr9P11380_001	Banana	cytosol	42.59	50.0
GSMUA_Achr8P15580_001	Banana	cytosol	38.21	49.26
GSMUA_Achr9P22570_001	Banana	plastid	39.16	46.82
GSMUA_Achr4P12920_001	Banana	plastid	44.49	45.79
OQU89081	Sorghum	cytosol	45.63	45.71
TraesCS2D01G358900.1	Wheat	mitochondrion, plastid	38.02	45.35
Os04t0505700-01	Rice	cytosol, mitochondrion	35.74	45.3
KXG26667	Sorghum	plastid	40.3	45.3
GSMUA_Achr2P05250_001	Banana	cytosol	41.83	45.27
TraesCS5A01G161400.1	Wheat	cytosol, plastid	44.49	44.4
Zm00001d003103_P001	Maize	plastid	43.73	44.23
TraesCS5B01G158800.1	Wheat	plastid	44.3	44.21
TraesCS5D01G166300.1	Wheat	cytosol, mitochondrion, peroxisome, plastid	44.3	44.21
Zm00001d019677_P001	Maize	cytosol	44.11	44.19
KRH52037	Soybean	cytosol	33.46	43.56
Zm00001d025808_P001	Maize	plastid	43.92	42.31
Zm00001d025812_P001	Maize	plastid	43.92	42.31
HORVU5Hr1G050420.1	Barley	plastid	44.11	42.03
TraesCS2A01G359900.1	Wheat	cytosol	43.16	41.96
HORVU0Hr1G005070.1	Barley	plastid	42.97	40.5
GSMUA_Achr9P18840_001	Banana	plastid	45.25	32.6
CDY01426	Canola	cytosol	57.03	27.7
CDY12824	Canola	nucleus	56.84	27.43
KRG90608	Soybean	cytosol	18.25	22.97
KRH36149	Soybean	cytosol	17.87	22.43
KRH61346	Soybean	cytosol	29.28	22.06
KRH16153	Soybean	cytosol	10.27	21.77
KRH02152	Soybean	cytosol	21.86	19.69
KRH47976	Soybean	cytosol	14.45	19.59
KRH11333	Soybean	cytosol	14.45	19.44
KRH64574	Soybean	cytosol	11.41	18.69
KRH50979	Soybean	cytosol	12.36	18.52
KRH20947	Soybean	cytosol, nucleus, peroxisome	21.29	18.45
KRH05167	Soybean	cytosol	20.72	17.87
KRH15886	Soybean	cytosol	21.67	17.7
KRH03688	Soybean	cytosol	21.48	17.68
KRH20255	Soybean	cytosol	21.29	17.53
KRH53355	Soybean	cytosol	12.36	17.47
KRH76059	Soybean	cytosol, nucleus, peroxisome	21.86	17.14
KRH62989	Soybean	cytosol	20.91	16.92
KRH61771	Soybean	cytosol	20.34	16.82
KRH18090	Soybean	cytosol	11.98	16.8
KRH15905	Soybean	cytosol	11.79	16.71
KRH52439	Soybean	cytosol, nucleus, peroxisome	19.96	16.46
KRH17127	Soybean	cytosol	20.34	16.41
KRH38032	Soybean	cytosol	11.79	16.4
KRH65525	Soybean	cytosol, peroxisome, plastid	22.05	16.38
KRH72766	Soybean	cytosol	16.73	16.36
KRH68483	Soybean	cytosol	19.77	16.22
KRG96764	Soybean	cytosol	19.39	15.91
KRH04870	Soybean	cytosol	7.22	13.97
Zm00001d037295_P001	Maize	mitochondrion	5.89	12.7
Zm00001d028552_P001	Maize	cytosol, extracellular, mitochondrion, plastid	5.13	12.16
Zm00001d039723_P001	Maize	cytosol, extracellular, plastid	4.94	11.16

Protein Annotations

EntrezGene:100807711	MapMan:19.2.2.8.1.4.6	Gene3D:3.80.10.10	EMBL:ACUP02006750	InterPro:F-box-like_dom_sf	InterPro:F-box_dom
EnsemblPlantsGene:GLYMA_11G052600	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	UniProt:I1LHA7	InterPro:IPR001810
InterPro:IPR032675	EnsemblPlants:KRH28425	ProteinID:KRH28425	ProteinID:KRH28425.1	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt_Cys-con_subtyp
PFAM:PF00646	PANTHER:PTHR44356	PANTHER:PTHR44356:SF2	SMART:SM00367	SUPFAM:SSF52047	SUPFAM:SSF81383
UniParc:UPI0001CA95AC	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr11:+:3960103..3962168

Molecular Weight (calculated)

57141.1 Da

IEP (calculated)

8.377

GRAVY (calculated)

-0.017

Length

526 amino acids

Sequence
(BLAST)

001: MGQSPSTTAA PPPDLNRHQI PQIHPNTDSD FTDYTLRLSD DCLAAIFHFL STADRKRCSL VCRRWLRVDG QRRHRLSLNA QPELLDFVPS LFNRFDSVTK
101: LALRCDRKCA SINDDALVLI SLRCRNLTRL KLRGCRDITE LGMAGVGENC KALKKLSCAS CMFGAKGIAA VLDRCVTLED LTLKRLRGVH HITDVEVGAA
201: ASLKSICLKE LVNGQSFAPL VIDSKKLRTL KIIGCTGDWD ETLVRVGCFN NGLVEVHLEK LQVTDVGLVA VSKCFGLDTL HVVKTAECSD VGLCAVADRC
301: RLLRKVHIDG WRTNRIGDDG LHAIAKHCLN LQELVLIGVY PTFSSLAAIA SNCRNLERLA LCGIGTVGDA EIECIADKCV ALRKLCIKGC PVSNAGIGAL
401: ASGCPNLVKV KVKKCKRITG KGVEWVREQR VSLAFNYDDS EVEALDGSAS DGIGGARDNT VEFLPTINQT TVAVAEADAE ASSSNNNNRL TMLRSRFGFL
501: AGRNLVPGAF RRWSNGDNVS SSSSFG

Best Arabidopsis Sequence Match ( AT5G67250.1 )
(BLAST)

001: MGQAPSSTAE SNGRELDLRL WSPVIVAGGE SMAVGNVVDR DFTGDLPDEC LAHVFQFLGA GDRKRCSLVC KRWLLVDGQS RHRLSLDAKD EISSFLTSMF
101: NRFDSVTKLA LRCDRKSVSL SDEALAMISV RCLNLTRVKL RGCREITDLG MEDFAKNCKN LKKLSVGSCN FGAKGVNAML EHCKLLEELS VKRLRGIHEA
201: AELIHLPDDA SSSSLRSICL KELVNGQVFE PLLATTRTLK TLKIIRCLGD WDKVLQMIAN GKSSLSEIHL ERLQVSDIGL SAISKCSNVE TLHIVKTPEC
301: SNFGLIYVAE RCKLLRKLHI DGWRTNRIGD EGLLSVAKHC LNLQELVLIG VNATHMSLAA IASNCEKLER LALCGSGTIG DTEIACIARK CGALRKFCIK
401: GCPVSDRGIE ALAVGCPNLV KLKVKKCKVV TGEIGDWLRE QRRTLVVSMD GDETEAVVVV DGEVETVVEE PRVAQAGGIV AEIGSSNGGG GSRLAMIRSK
501: LGFLAGRNLV TCTFRRWSHN DNASSST

Arabidopsis Description

SKIP2F-box protein SKIP2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FE83]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.