Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH52037 | Soybean | cytosol | 41.69 | 72.03 |
| KRH15408 | Soybean | plastid | 25.64 | 32.6 |
| KRH05631 | Soybean | plastid | 25.5 | 31.62 |
| GSMUA_Achr8P15580_001 | Banana | cytosol | 17.77 | 30.39 |
| GSMUA_Achr3P28280_001 | Banana | plastid | 21.06 | 29.82 |
| KRH77049 | Soybean | cytosol | 21.92 | 29.31 |
| KRH28425 | Soybean | cytosol | 22.06 | 29.28 |
| GSMUA_Achr9P11380_001 | Banana | cytosol | 18.77 | 29.24 |
| KRH04530 | Soybean | cytosol | 22.21 | 28.76 |
| GSMUA_Achr4P12920_001 | Banana | plastid | 20.49 | 27.98 |
| KRH57971 | Soybean | cytosol | 22.21 | 27.73 |
| GSMUA_Achr2P05250_001 | Banana | cytosol | 19.2 | 27.57 |
| TraesCS2D01G358900.1 | Wheat | mitochondrion, plastid | 16.91 | 26.76 |
| Os04t0505700-01 | Rice | cytosol, mitochondrion | 15.9 | 26.75 |
| OQU89081 | Sorghum | cytosol | 19.91 | 26.48 |
| TraesCS5D01G166300.1 | Wheat | cytosol, mitochondrion, peroxisome, plastid | 19.48 | 25.81 |
| TraesCS5B01G158800.1 | Wheat | plastid | 19.48 | 25.81 |
| TraesCS5A01G161400.1 | Wheat | cytosol, plastid | 19.48 | 25.81 |
| Zm00001d003103_P001 | Maize | plastid | 19.2 | 25.77 |
| Zm00001d025812_P001 | Maize | plastid | 19.91 | 25.46 |
| KXG26667 | Sorghum | plastid | 17.05 | 25.43 |
| Zm00001d025808_P001 | Maize | plastid | 19.77 | 25.27 |
| Zm00001d019677_P001 | Maize | cytosol | 18.77 | 24.95 |
| GSMUA_Achr9P22570_001 | Banana | plastid | 15.62 | 24.77 |
| TraesCS2A01G359900.1 | Wheat | cytosol | 19.2 | 24.77 |
| HORVU5Hr1G050420.1 | Barley | plastid | 19.34 | 24.46 |
| HORVU0Hr1G005070.1 | Barley | plastid | 19.34 | 24.19 |
| GSMUA_Achr9P18840_001 | Banana | plastid | 20.77 | 19.86 |
| KRH16153 | Soybean | cytosol | 6.59 | 18.55 |
| KRH47976 | Soybean | cytosol | 10.17 | 18.3 |
| KRH36149 | Soybean | cytosol | 10.46 | 17.42 |
| KRG90608 | Soybean | cytosol | 10.03 | 16.75 |
| KRH38032 | Soybean | cytosol | 9.03 | 16.67 |
| KRH64574 | Soybean | cytosol | 7.59 | 16.51 |
| KRH53355 | Soybean | cytosol | 8.74 | 16.4 |
| KRH18090 | Soybean | cytosol | 8.45 | 15.73 |
| KRH15905 | Soybean | cytosol | 8.17 | 15.36 |
| KRH11333 | Soybean | cytosol | 8.17 | 14.58 |
| KRH05167 | Soybean | cytosol | 12.46 | 14.26 |
| Zm00001d037295_P001 | Maize | mitochondrion | 4.87 | 13.93 |
| KRH03688 | Soybean | cytosol | 12.61 | 13.77 |
| KRH20255 | Soybean | cytosol | 12.61 | 13.77 |
| KRH15886 | Soybean | cytosol | 12.61 | 13.66 |
| KRH62989 | Soybean | cytosol | 12.32 | 13.23 |
| KRH02152 | Soybean | cytosol | 11.03 | 13.18 |
| KRH52439 | Soybean | cytosol, nucleus, peroxisome | 11.75 | 12.85 |
| KRH50979 | Soybean | cytosol | 6.45 | 12.82 |
| KRH61771 | Soybean | cytosol | 11.46 | 12.58 |
| KRH20947 | Soybean | cytosol, nucleus, peroxisome | 10.74 | 12.36 |
| Zm00001d028552_P001 | Maize | cytosol, extracellular, mitochondrion, plastid | 3.87 | 12.16 |
| KRH04870 | Soybean | cytosol | 4.73 | 12.13 |
| Zm00001d039723_P001 | Maize | cytosol, extracellular, plastid | 3.72 | 11.16 |
| KRG96764 | Soybean | cytosol | 10.03 | 10.92 |
| KRH72766 | Soybean | cytosol | 8.31 | 10.78 |
| KRH68483 | Soybean | cytosol | 9.89 | 10.76 |
| KRH76059 | Soybean | cytosol, nucleus, peroxisome | 9.6 | 9.99 |
| KRH65525 | Soybean | cytosol, peroxisome, plastid | 9.6 | 9.46 |
| KRH17127 | Soybean | cytosol | 8.74 | 9.36 |
Protein Annotations
| MapMan:19.2.2.8.1.4.6 | Gene3D:3.80.10.10 | EMBL:ACUP02002161 | InterPro:F-box-like_dom_sf | InterPro:F-box_dom | EnsemblPlantsGene:GLYMA_04G041800 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR001810 | InterPro:IPR032675 | UniProt:K7KI10 |
| EnsemblPlants:KRH61346 | ProteinID:KRH61346 | ProteinID:KRH61346.1 | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt_Cys-con_subtyp | PFAM:PF00646 |
| PANTHER:PTHR44356 | PANTHER:PTHR44356:SF2 | SMART:SM00367 | SUPFAM:SSF52047 | SUPFAM:SSF81383 | UniParc:UPI0002952277 |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr4:-:3345288..3349883
Molecular Weight (calculated)
77517.3 Da
IEP (calculated)
7.314
GRAVY (calculated)
0.070
Length
698 amino acids
Sequence
(BLAST)
(BLAST)
001: MFGYLYTELQ YSKRIPRMGK AVSIDEIPDE CLGCIFQLFS PGERKMFSLV CSRWLKIEGQ TYQRLSLTAD GLLSIPCTFS RFSSLTELTL INSLSKSIGD
101: EALTLLTHRC CPNLTFFTLH SSIHSDACLE NFAMNHKGLK KFSAVSCIFT YKGLKAFMDH CVSLEELRLK YLNSNPNIAN ADEDGFVTSS SLKALYLEGV
201: DFSILKAISK RSSLEVLHLE MIGMCSDEGL VAVLEGCNLL RELRIRRSYC WEANLMGDKV LIAIVECCPN LQELVLDGLN PSTKASLEML AFKCRSIGRL
301: ALRGKSSISY SDLASILAKL FQSDGYMQSA DAMGFFGVRK ELQYSNIITR IDDIPDNCLA SIFQLFPPVD HKNFSLVCRR CLKVQGQTHH RLCLTLPYSK
401: FLASIFTRFD SVTELTLQCL NLMSMCDGNL VVISDLCPNL SYVGLEVLAR SCERLKKFSC TSCTFGLNAI DALIHHCSSL EELSMEHSSV KTDGAEFVNF
501: YPLIRAKNLT TVKIVQSSVE EYWDRFFHSL ASQVTSLLEV RLDGFGVSDN GLKAISKFPN LETLHLVKTP KCTDAGLVEV AEGCNKSLRK LGIEESLQKG
601: PNKIGNNGLR AVAKCCANLQ ELVLIGMNPS KANLEILVSN CQSLKHLGLW GSNKFGDTEI RCIAGKCVAL KELHVEGCPR VSDRDMETLA AKSEGFQV
101: EALTLLTHRC CPNLTFFTLH SSIHSDACLE NFAMNHKGLK KFSAVSCIFT YKGLKAFMDH CVSLEELRLK YLNSNPNIAN ADEDGFVTSS SLKALYLEGV
201: DFSILKAISK RSSLEVLHLE MIGMCSDEGL VAVLEGCNLL RELRIRRSYC WEANLMGDKV LIAIVECCPN LQELVLDGLN PSTKASLEML AFKCRSIGRL
301: ALRGKSSISY SDLASILAKL FQSDGYMQSA DAMGFFGVRK ELQYSNIITR IDDIPDNCLA SIFQLFPPVD HKNFSLVCRR CLKVQGQTHH RLCLTLPYSK
401: FLASIFTRFD SVTELTLQCL NLMSMCDGNL VVISDLCPNL SYVGLEVLAR SCERLKKFSC TSCTFGLNAI DALIHHCSSL EELSMEHSSV KTDGAEFVNF
501: YPLIRAKNLT TVKIVQSSVE EYWDRFFHSL ASQVTSLLEV RLDGFGVSDN GLKAISKFPN LETLHLVKTP KCTDAGLVEV AEGCNKSLRK LGIEESLQKG
601: PNKIGNNGLR AVAKCCANLQ ELVLIGMNPS KANLEILVSN CQSLKHLGLW GSNKFGDTEI RCIAGKCVAL KELHVEGCPR VSDRDMETLA AKSEGFQV
001: MGQSTSAAGN SILNRRRSKS FTLKFPIESI ESEISQPDYT SSLPDECLAL VFQFLNSGNR KRCALVCRRW MIVEGQNRYR LSLHARSDLI TSIPSLFSRF
101: DSVTKLSLKC DRRSVSIGDE ALVKISLRCR NLKRLKLRAC RELTDVGMAA FAENCKDLKI FSCGSCDFGA KGVKAVLDHC SNLEELSIKR LRGFTDIAPE
201: MIGPGVAASS LKSICLKELY NGQCFGPVIV GAKNLKSLKL FRCSGDWDLL LQEMSGKDHG VVEIHLERMQ VSDVALSAIS YCSSLESLHL VKTPECTNFG
301: LAAIAEKCKR LRKLHIDGWK ANLIGDEGLV AVAKFCSQLQ ELVLIGVNPT TLSLGMLAAK CLNLERLALC GCDTFGDPEL SCIAAKCPAL RKLCIKNCPI
401: SDVGIENLAN GCPGLTKVKI KKCKGVLGGC ADWLRTVRPM LSVNADTMEQ EHEEAASNDV VGGSQENGIE FPQLNSQIMA SSIASSSRNR SGYFKSGIGL
501: FSGMSLVPCT SRQRRASR
101: DSVTKLSLKC DRRSVSIGDE ALVKISLRCR NLKRLKLRAC RELTDVGMAA FAENCKDLKI FSCGSCDFGA KGVKAVLDHC SNLEELSIKR LRGFTDIAPE
201: MIGPGVAASS LKSICLKELY NGQCFGPVIV GAKNLKSLKL FRCSGDWDLL LQEMSGKDHG VVEIHLERMQ VSDVALSAIS YCSSLESLHL VKTPECTNFG
301: LAAIAEKCKR LRKLHIDGWK ANLIGDEGLV AVAKFCSQLQ ELVLIGVNPT TLSLGMLAAK CLNLERLALC GCDTFGDPEL SCIAAKCPAL RKLCIKNCPI
401: SDVGIENLAN GCPGLTKVKI KKCKGVLGGC ADWLRTVRPM LSVNADTMEQ EHEEAASNDV VGGSQENGIE FPQLNSQIMA SSIASSSRNR SGYFKSGIGL
501: FSGMSLVPCT SRQRRASR
Arabidopsis Description
VFB1F-box protein At1g47056 [Source:UniProtKB/Swiss-Prot;Acc:Q9C626]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.