CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH20255	Soybean	cytosol	94.68	94.68
KRH04870	Soybean	cytosol	33.49	78.68
KRH62989	Soybean	cytosol	75.9	74.62
VIT_11s0016g05410.t01	Wine grape	cytosol	70.74	68.17
PGSC0003DMT400007545	Potato	cytosol	67.61	67.82
Solyc12g009560.1.1	Tomato	cytosol	66.98	67.19
PGSC0003DMT400079445	Potato	cytosol, nucleus, peroxisome	64.32	64.02
Solyc07g008250.2.1	Tomato	cytosol, nucleus, peroxisome	63.69	63.49
KRH15886	Soybean	cytosol	61.66	61.18
KRH05167	Soybean	cytosol	57.28	60.0
KRH61771	Soybean	cytosol	57.28	57.55
KRH52439	Soybean	cytosol, nucleus, peroxisome	57.28	57.37
GSMUA_Achr6P05220_001	Banana	cytosol	54.15	52.91
GSMUA_Achr9P28510_001	Banana	cytosol, nucleus, peroxisome	53.52	52.29
GSMUA_Achr4P30680_001	Banana	cytosol	53.21	52.15
HORVU7Hr1G090240.1	Barley	cytosol	43.98	52.13
HORVU1Hr1G089690.1	Barley	cytosol, extracellular, mitochondrion	21.28	51.13
GSMUA_Achr10P...	Banana	extracellular, plasma membrane, plastid	52.58	50.3
Zm00001d053642_P001	Maize	cytosol	50.86	49.92
Zm00001d015778_P001	Maize	cytosol	50.23	49.92
EES06473	Sorghum	cytosol, peroxisome, plasma membrane	51.02	49.77
TraesCS6D01G169200.1	Wheat	cytosol	49.77	49.0
TraesCS6A01G181900.1	Wheat	cytosol	49.61	48.84
TraesCS6B01G210700.1	Wheat	cytosol	49.61	48.84
TraesCS7A01G377500.1	Wheat	cytosol	49.3	48.54
TraesCS7B01G278800.1	Wheat	cytosol	49.14	48.53
GSMUA_Achr2P15920_001	Banana	cytosol, peroxisome, plastid	50.39	48.2
HORVU6Hr1G038430.3	Barley	plastid	49.14	48.09
TraesCS7D01G373800.1	Wheat	cytosol	48.98	48.08
EER90022	Sorghum	cytosol, plastid	46.79	47.76
Os02t0200900-01	Rice	cytosol	48.83	47.27
Os06t0605900-01	Rice	cytosol	46.17	47.05
HORVU5Hr1G029670.1	Barley	mitochondrion	33.33	41.52
HORVU5Hr1G000950.4	Barley	plastid	28.64	40.94
Zm00001d036880_P003	Maize	cytosol	46.48	40.35
Zm00001d000408_P001	Maize	cytosol	45.85	39.43
KRH64574	Soybean	cytosol	12.83	25.55
KRG90608	Soybean	cytosol	16.28	24.88
KRH36149	Soybean	cytosol	16.28	24.82
KRH47976	Soybean	cytosol	15.02	24.74
KRH16153	Soybean	cytosol	9.39	24.19
KRH53355	Soybean	cytosol	13.93	23.92
KRH20947	Soybean	cytosol, nucleus, peroxisome	22.69	23.89
KRH02152	Soybean	cytosol	21.75	23.8
KRH50979	Soybean	cytosol	12.99	23.65
KRH52037	Soybean	cytosol	14.87	23.51
KRH18090	Soybean	cytosol	13.77	23.47
KRH15905	Soybean	cytosol	13.46	23.18
KRH11333	Soybean	cytosol	13.93	22.76
KRH15408	Soybean	plastid	19.41	22.59
KRH38032	Soybean	cytosol	13.3	22.49
KRH68483	Soybean	cytosol	22.54	22.46
KRG96764	Soybean	cytosol	22.22	22.15
KRH04530	Soybean	cytosol	18.62	22.08
KRH57971	Soybean	cytosol	19.25	22.0
KRH77049	Soybean	cytosol	17.84	21.84
KRH72766	Soybean	cytosol	18.31	21.75
KRH05631	Soybean	plastid	19.09	21.67
KRH28425	Soybean	cytosol	17.68	21.48
KRH17127	Soybean	cytosol	20.66	20.25
KRH76059	Soybean	cytosol, nucleus, peroxisome	20.81	19.82
KRH65525	Soybean	cytosol, peroxisome, plastid	21.44	19.35
KRH61346	Soybean	cytosol	13.77	12.61

Protein Annotations

Gene3D:1.20.1280.50	EntrezGene:100812291	MapMan:11.5.2.6	MapMan:19.2.2.8.1.4.2	Gene3D:3.80.10.10	EMBL:ACUP02010357
InterPro:F-box-like_dom_sf	InterPro:F-box_dom	EnsemblPlantsGene:GLYMA_17G113900	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
UniProt:I1MU84	InterPro:IPR001611	InterPro:IPR001810	InterPro:IPR032675	EnsemblPlants:KRH03688	ProteinID:KRH03688
ProteinID:KRH03688.1	ProteinID:KRH03689.1	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_Cys-con_subtyp	PFAM:PF12937
PFAM:PF13516	PANTHER:PTHR44327	PANTHER:PTHR44327:SF1	SMART:SM00256	SMART:SM00367	SUPFAM:SSF52047
SUPFAM:SSF81383	UniParc:UPI000233E20E	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr17:-:9011720..9016930

Molecular Weight (calculated)

68398.2 Da

IEP (calculated)

6.478

GRAVY (calculated)

0.194

Length

639 amino acids

Sequence
(BLAST)

001: MPALVNYSGD DELYPGGSFC PNPVELGRLY TTIGSNLDVY YPPTKRPRSI FEAIEREQYY QEPGIEVLPD ECLFEIFRRL PSGKERSSCA CVSKRWLMLM
101: STICKDEIER ATSVDETVSS DENQDIEDDG YLTRCLDGKK ATDVRLAAIA VGTSSRGGLG KLLIRGSNSE RGVTNLGLSA VAHGCPSLRS LSLWNVSTIG
201: DEGVSQIAKG CHILEKLDLC HCSSISNKGL IAIAEGCPNL TTLTIESCPN IGNEGLQAIA RLCTKLQSIS LKDCPLVGDH GVSSLLASAS NLSRVKLQTL
301: KITDFSLAVI CHYGKAITNL VLSGLKNVTE RGFWVMGAAQ GLQKLVSLTV TSCRGITDTS IEAIGKGCIN LKQLCLHRCC FVSDSGLVAF AKAAVSLESL
401: QLEECNRFTQ SGIIVALANI KTKLKSLSLV KCMGVKDIDM EVCMLSPCES LRSLVIQKCP GFGSASLAMI GKLCPRLQHL NLTGLYGITD AGLLPLLENC
501: EAGLVNVNLT GCWNLTDKVV SALARLHGGT LEVLNLDGCW KITDASLVAI ANNFLVLNDL DVSKCAISDA GIALLSRASL PSLQVLSLSG CSDVSNKSAP
601: FLTKLGQTLL GLNLQNCNSI GSSTMELLVE KLWRCDILA

Best Arabidopsis Sequence Match ( AT5G25350.1 )
(BLAST)

001: MSGIFRFSGD EDCLLGGSMY LSPGSCPGVY YPARKRLRVA ATSFYSGFEE KQTSIDVLPE ECLFEILRRL PSGQERSACA CVSKHWLNLL SSISRSEVNE
101: SSVQDVEEGE GFLSRSLEGK KATDLRLAAI AVGTSSRGGL GKLQIRGSGF ESKVTDVGLG AVAHGCPSLR IVSLWNLPAV SDLGLSEIAR SCPMIEKLDL
201: SRCPGITDSG LVAIAENCVN LSDLTIDSCS GVGNEGLRAI ARRCVNLRSI SIRSCPRIGD QGVAFLLAQA GSYLTKVKLQ MLNVSGLSLA VIGHYGAAVT
301: DLVLHGLQGV NEKGFWVMGN AKGLKKLKSL SVMSCRGMTD VGLEAVGNGC PDLKHVSLNK CLLVSGKGLV ALAKSALSLE SLKLEECHRI NQFGLMGFLM
401: NCGSKLKAFS LANCLGISDF NSESSLPSPS CSSLRSLSIR CCPGFGDASL AFLGKFCHQL QDVELCGLNG VTDAGVRELL QSNNVGLVKV NLSECINVSD
501: NTVSAISVCH GRTLESLNLD GCKNITNASL VAVAKNCYSV NDLDISNTLV SDHGIKALAS SPNHLNLQVL SIGGCSSITD KSKACIQKLG RTLLGLNIQR
601: CGRISSSTVD TLLENLWRCD ILY

Arabidopsis Description

EBF2EIN3-binding F-box protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q708Y0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.