Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- vacuole 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH28425 | Soybean | cytosol | 93.49 | 92.78 |
| KRH04530 | Soybean | cytosol | 65.71 | 63.64 |
| KRH57971 | Soybean | cytosol | 64.75 | 60.47 |
| AT5G67250.1 | Thale cress | cytosol | 57.85 | 57.31 |
| CDX81326 | Canola | cytosol | 56.32 | 56.11 |
| CDY18646 | Canola | cytosol | 56.13 | 55.92 |
| Bra037120.1-P | Field mustard | cytosol | 56.13 | 55.7 |
| CDX83114 | Canola | cytosol | 52.68 | 55.33 |
| Bra029994.1-P | Field mustard | cytosol | 53.64 | 54.79 |
| CDX68575 | Canola | cytosol | 52.68 | 53.82 |
| AT3G50080.1 | Thale cress | cytosol | 53.45 | 53.45 |
| PGSC0003DMT400064250 | Potato | mitochondrion | 55.75 | 52.91 |
| VIT_07s0129g01110.t01 | Wine grape | plastid | 56.9 | 52.75 |
| Solyc02g092990.1.1 | Tomato | plastid | 55.56 | 52.73 |
| KRH15408 | Soybean | plastid | 55.17 | 52.46 |
| PGSC0003DMT400053918 | Potato | cytosol | 54.79 | 52.09 |
| Solyc03g044220.1.1 | Tomato | cytosol | 54.41 | 51.73 |
| KRH05631 | Soybean | plastid | 55.17 | 51.15 |
| GSMUA_Achr3P28280_001 | Banana | plastid | 46.93 | 49.7 |
| GSMUA_Achr9P11380_001 | Banana | cytosol | 41.57 | 48.44 |
| GSMUA_Achr8P15580_001 | Banana | cytosol | 37.36 | 47.79 |
| GSMUA_Achr9P22570_001 | Banana | plastid | 38.51 | 45.68 |
| GSMUA_Achr2P05250_001 | Banana | cytosol | 41.95 | 45.06 |
| GSMUA_Achr4P12920_001 | Banana | plastid | 44.06 | 45.01 |
| Os04t0505700-01 | Rice | cytosol, mitochondrion | 35.44 | 44.58 |
| OQU89081 | Sorghum | cytosol | 44.83 | 44.57 |
| TraesCS2D01G358900.1 | Wheat | mitochondrion, plastid | 37.55 | 44.44 |
| KXG26667 | Sorghum | plastid | 39.66 | 44.23 |
| Zm00001d003103_P001 | Maize | plastid | 43.1 | 43.27 |
| TraesCS5A01G161400.1 | Wheat | cytosol, plastid | 43.49 | 43.07 |
| KRH52037 | Soybean | cytosol | 33.33 | 43.07 |
| Zm00001d019677_P001 | Maize | cytosol | 43.3 | 43.05 |
| TraesCS5D01G166300.1 | Wheat | cytosol, mitochondrion, peroxisome, plastid | 43.3 | 42.88 |
| TraesCS5B01G158800.1 | Wheat | plastid | 43.3 | 42.88 |
| Zm00001d025808_P001 | Maize | plastid | 43.3 | 41.39 |
| Zm00001d025812_P001 | Maize | plastid | 43.3 | 41.39 |
| TraesCS2A01G359900.1 | Wheat | cytosol | 42.72 | 41.22 |
| HORVU5Hr1G050420.1 | Barley | plastid | 43.1 | 40.76 |
| HORVU0Hr1G005070.1 | Barley | plastid | 42.53 | 39.78 |
| GSMUA_Achr9P18840_001 | Banana | plastid | 44.64 | 31.92 |
| CDY01426 | Canola | cytosol | 57.47 | 27.7 |
| CDY12824 | Canola | nucleus | 57.09 | 27.34 |
| KRG90608 | Soybean | cytosol | 18.39 | 22.97 |
| KRH36149 | Soybean | cytosol | 18.01 | 22.43 |
| KRH61346 | Soybean | cytosol | 29.31 | 21.92 |
| KRH16153 | Soybean | cytosol | 10.15 | 21.37 |
| KRH02152 | Soybean | cytosol | 21.84 | 19.52 |
| KRH11333 | Soybean | cytosol | 14.37 | 19.18 |
| KRH47976 | Soybean | cytosol | 14.18 | 19.07 |
| KRH64574 | Soybean | cytosol | 11.49 | 18.69 |
| KRH20947 | Soybean | cytosol, nucleus, peroxisome | 21.46 | 18.45 |
| KRH05167 | Soybean | cytosol | 21.26 | 18.2 |
| KRH15886 | Soybean | cytosol | 22.22 | 18.01 |
| KRH03688 | Soybean | cytosol | 21.84 | 17.84 |
| KRH20255 | Soybean | cytosol | 21.65 | 17.68 |
| KRH50979 | Soybean | cytosol | 11.88 | 17.66 |
| KRH53355 | Soybean | cytosol | 12.45 | 17.47 |
| KRH76059 | Soybean | cytosol, nucleus, peroxisome | 22.22 | 17.29 |
| KRH62989 | Soybean | cytosol | 21.26 | 17.08 |
| KRH61771 | Soybean | cytosol | 20.5 | 16.82 |
| KRH18090 | Soybean | cytosol | 12.07 | 16.8 |
| KRH15905 | Soybean | cytosol | 11.88 | 16.71 |
| KRH72766 | Soybean | cytosol | 17.05 | 16.54 |
| KRH65525 | Soybean | cytosol, peroxisome, plastid | 22.41 | 16.53 |
| KRH17127 | Soybean | cytosol | 20.5 | 16.41 |
| KRH52439 | Soybean | cytosol, nucleus, peroxisome | 19.92 | 16.3 |
| KRH68483 | Soybean | cytosol | 19.92 | 16.22 |
| KRH38032 | Soybean | cytosol | 11.69 | 16.14 |
| KRG96764 | Soybean | cytosol | 19.54 | 15.91 |
| KRH04870 | Soybean | cytosol | 7.47 | 14.34 |
| Zm00001d028552_P001 | Maize | cytosol, extracellular, mitochondrion, plastid | 5.36 | 12.61 |
| Zm00001d037295_P001 | Maize | mitochondrion | 5.75 | 12.3 |
| Zm00001d039723_P001 | Maize | cytosol, extracellular, plastid | 4.98 | 11.16 |
Protein Annotations
| Gene3D:1.20.1280.50 | MapMan:19.2.2.8.1.4.6 | Gene3D:3.80.10.10 | UniProt:A0A0R0LJN3 | EMBL:ACUP02000654 | InterPro:F-box-like_dom_sf |
| InterPro:F-box_dom | EnsemblPlantsGene:GLYMA_01G189600 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR001810 |
| InterPro:IPR032675 | ProteinID:KRH77048.1 | EnsemblPlants:KRH77049 | ProteinID:KRH77049 | ProteinID:KRH77049.1 | InterPro:LRR_dom_sf |
| InterPro:Leu-rich_rpt_Cys-con_subtyp | PFAM:PF00646 | PANTHER:PTHR44356 | PANTHER:PTHR44356:SF2 | SMART:SM00367 | SUPFAM:SSF52047 |
| SUPFAM:SSF81383 | UniParc:UPI00023377D0 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr1:-:52461137..52463213
Molecular Weight (calculated)
56396.4 Da
IEP (calculated)
8.376
GRAVY (calculated)
0.023
Length
522 amino acids
Sequence
(BLAST)
(BLAST)
001: MGQSPSTSAA PPPDLNRLQI AQLHPNTDSD STDYTLRLSD DCLAAIFHFL NTADRKRCSL VCLRWRLVDG QRRHRLSLNA QPELLDFVPS LFNRFDSVTK
101: LALRCDRKCA SINDEALVLI SLRCRNLTRL KLRGCRDITE LGMAGVGDNC KALKKLSCAS CMFGAKGIAA VLDRCFTLED LTLKRLRGVH HIGDMAVGAA
201: ASLKSICLKE LVNGQSFAPL LIGSKKLRTL KVIGCTGDWD ETLVRVGCSN NGLVEVHLEK LQVTDVGLVA VSKCLGLDTL HVVKTAECSD VGLCAVAERC
301: KLLRKVHIDG WRTNRIGDDG LVAIAKHCLN LQELVLIGVY PTFSSLAAIA SNCGNLERLA LCGIGTVGDA EIECIADKCV ALRKLCIKGC PVSNAGIGAL
401: ASGCPNLVKL KVKKCKRITG KGVEWVREQR VSLAFNYDDS EFEALDGGAS DGVGGAQDNT VEFLPNIINQ TTVAEAEASS SNNNNRMTML RSRFGFLAGR
501: NLVPGAFRRW SNSDNVSSSS FG
101: LALRCDRKCA SINDEALVLI SLRCRNLTRL KLRGCRDITE LGMAGVGDNC KALKKLSCAS CMFGAKGIAA VLDRCFTLED LTLKRLRGVH HIGDMAVGAA
201: ASLKSICLKE LVNGQSFAPL LIGSKKLRTL KVIGCTGDWD ETLVRVGCSN NGLVEVHLEK LQVTDVGLVA VSKCLGLDTL HVVKTAECSD VGLCAVAERC
301: KLLRKVHIDG WRTNRIGDDG LVAIAKHCLN LQELVLIGVY PTFSSLAAIA SNCGNLERLA LCGIGTVGDA EIECIADKCV ALRKLCIKGC PVSNAGIGAL
401: ASGCPNLVKL KVKKCKRITG KGVEWVREQR VSLAFNYDDS EFEALDGGAS DGVGGAQDNT VEFLPNIINQ TTVAEAEASS SNNNNRMTML RSRFGFLAGR
501: NLVPGAFRRW SNSDNVSSSS FG
001: MGQAPSSTAE SNGRELDLRL WSPVIVAGGE SMAVGNVVDR DFTGDLPDEC LAHVFQFLGA GDRKRCSLVC KRWLLVDGQS RHRLSLDAKD EISSFLTSMF
101: NRFDSVTKLA LRCDRKSVSL SDEALAMISV RCLNLTRVKL RGCREITDLG MEDFAKNCKN LKKLSVGSCN FGAKGVNAML EHCKLLEELS VKRLRGIHEA
201: AELIHLPDDA SSSSLRSICL KELVNGQVFE PLLATTRTLK TLKIIRCLGD WDKVLQMIAN GKSSLSEIHL ERLQVSDIGL SAISKCSNVE TLHIVKTPEC
301: SNFGLIYVAE RCKLLRKLHI DGWRTNRIGD EGLLSVAKHC LNLQELVLIG VNATHMSLAA IASNCEKLER LALCGSGTIG DTEIACIARK CGALRKFCIK
401: GCPVSDRGIE ALAVGCPNLV KLKVKKCKVV TGEIGDWLRE QRRTLVVSMD GDETEAVVVV DGEVETVVEE PRVAQAGGIV AEIGSSNGGG GSRLAMIRSK
501: LGFLAGRNLV TCTFRRWSHN DNASSST
101: NRFDSVTKLA LRCDRKSVSL SDEALAMISV RCLNLTRVKL RGCREITDLG MEDFAKNCKN LKKLSVGSCN FGAKGVNAML EHCKLLEELS VKRLRGIHEA
201: AELIHLPDDA SSSSLRSICL KELVNGQVFE PLLATTRTLK TLKIIRCLGD WDKVLQMIAN GKSSLSEIHL ERLQVSDIGL SAISKCSNVE TLHIVKTPEC
301: SNFGLIYVAE RCKLLRKLHI DGWRTNRIGD EGLLSVAKHC LNLQELVLIG VNATHMSLAA IASNCEKLER LALCGSGTIG DTEIACIARK CGALRKFCIK
401: GCPVSDRGIE ALAVGCPNLV KLKVKKCKVV TGEIGDWLRE QRRTLVVSMD GDETEAVVVV DGEVETVVEE PRVAQAGGIV AEIGSSNGGG GSRLAMIRSK
501: LGFLAGRNLV TCTFRRWSHN DNASSST
Arabidopsis Description
SKIP2F-box protein SKIP2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FE83]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.