Factsheet for Zm00001d028552_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, extracellular, cytosol

Predictor Summary:

mitochondrion 2
cytosol 1
extracellular 2
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular, mitochondrion, plastid
Any Predictor:	cytosol, mitochondrion, secretory
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d039723_P001	Maize	cytosol, extracellular, plastid	92.79	88.41
Zm00001d037295_P001	Maize	mitochondrion	80.63	73.36
Zm00001d036880_P003	Maize	cytosol	67.12	20.24
Zm00001d000408_P001	Maize	cytosol	65.77	19.65
Zm00001d053642_P001	Maize	cytosol	53.15	18.13
Zm00001d015778_P001	Maize	cytosol	52.25	18.04
PGSC0003DMT400008648	Potato	cytosol	7.66	10.18
Zm00001d015974_P002	Maize	cytosol	16.22	10.06
Zm00001d051219_P001	Maize	cytosol	15.77	8.39
GSMUA_Achr8P15580_001	Banana	cytosol	15.32	8.33
GSMUA_Achr9P11380_001	Banana	cytosol	15.77	7.81
Zm00001d007640_P001	Maize	cytosol	19.82	7.01
Zm00001d048695_P001	Maize	cytosol	20.27	6.94
KRH52037	Soybean	cytosol	12.16	6.68
Zm00001d023825_P001	Maize	cytosol	19.37	6.52
KRH04530	Soybean	cytosol	15.77	6.49
Zm00001d041635_P002	Maize	cytosol	19.37	6.49
AT1G47056.1	Thale cress	cytosol, plastid	14.86	6.37
PGSC0003DMT400064250	Potato	mitochondrion	15.77	6.36
Zm00001d003103_P001	Maize	plastid	14.86	6.35
KRH57971	Soybean	cytosol	15.77	6.26
Zm00001d038224_P004	Maize	cytosol	10.36	6.25
Zm00001d025808_P001	Maize	plastid	15.32	6.23
Zm00001d025812_P001	Maize	plastid	15.32	6.23
Zm00001d044622_P002	Maize	mitochondrion	19.37	6.11
Solyc02g092990.1.1	Tomato	plastid	14.86	6.0
Zm00001d005072_P003	Maize	mitochondrion	19.37	5.93
Bra032213.1-P	Field mustard	plastid	13.51	5.84
CDY43846	Canola	plastid	13.51	5.84
CDY25663	Canola	plastid	13.51	5.84
Solyc04g078490.1.1	Tomato	cytosol	13.96	5.81
Zm00001d019677_P001	Maize	cytosol	13.51	5.71
CDX68575	Canola	cytosol	13.06	5.68
Solyc03g044220.1.1	Tomato	cytosol	13.96	5.65
PGSC0003DMT400053918	Potato	cytosol	13.96	5.65
KRH15408	Soybean	plastid	13.96	5.65
CDX83114	Canola	cytosol	12.61	5.63
AT3G50080.1	Thale cress	cytosol	13.06	5.56
VIT_18s0001g09940.t01	Wine grape	plastid	13.51	5.55
CDY18646	Canola	cytosol	13.06	5.53
CDX81326	Canola	cytosol	13.06	5.53
Bra037120.1-P	Field mustard	cytosol	13.06	5.51
KRH05631	Soybean	plastid	13.96	5.51
AT5G67250.1	Thale cress	cytosol	13.06	5.5
Bra029994.1-P	Field mustard	cytosol	12.61	5.48
KRH77049	Soybean	cytosol	12.61	5.36
KRH28425	Soybean	cytosol	12.16	5.13
AT4G07400.1	Thale cress	nucleus	12.61	5.05
Zm00001d000224_P001	Maize	cytosol	9.01	4.62
VIT_07s0129g01110.t01	Wine grape	plastid	11.71	4.62
PGSC0003DMT400091765	Potato	cytosol	13.96	4.39
Zm00001d007294_P001	Maize	cytosol	7.21	3.94
KRH61346	Soybean	cytosol	12.16	3.87
CDY01426	Canola	cytosol	13.96	2.86
CDY12824	Canola	nucleus	13.51	2.75

Protein Annotations

EnsemblPlants:Zm00001d028552_P001	EnsemblPlants:Zm00001d028552_T001	EnsemblPlantsGene:Zm00001d028552	Gene3D:3.80.10.10	InterPro:IPR032675	InterPro:LRR_dom_sf
InterPro:Leu-rich_rpt_Cys-con_subtyp	PANTHER:PTHR44327	PANTHER:PTHR44327:SF3	ProteinID:ONL96358.1	SEG:seg	SMART:SM00367
SUPFAM:SSF52047	UniParc:UPI000220735A	UniProt:A0A1D6JXE7	MapMan:35.1	:	:

Description

EIN3-binding F-box protein 1

Coordinates

chr1:+:38985184..38986051

Molecular Weight (calculated)

23703.8 Da

IEP (calculated)

8.078

GRAVY (calculated)

0.264

Length

222 amino acids

Sequence
(BLAST)

001: MRFQGLNVTN YASLVMMGYY GKSIKDLALA RIPAVSLESL QIEECSKVTL TGILAFFLNC SPKFKSLSLS KCIEIKDICS ASAQLPVCKS LRSLAIKDCS
101: GFTDTSLPMV GMFCPQLENI NLSGLSAVTD NGFLPLMKSS DSGLVDIDLN SCENLTVTDA AVSALVKDHD ASLATSLTMM QACSPSVRVA ASSSSSTFRT
201: AWSMTTMARS WKRRSSSGCV AV

Best Arabidopsis Sequence Match ( AT2G25490.1 )
(BLAST)

001: MSQIFSFAGE NDFYRRGAIY PNPKDASLLL SLGSFADVYF PPSKRSRVVA PTIFSAFEKK PVSIDVLPDE CLFEIFRRLS GPQERSACAF VSKQWLTLVS
101: SIRQKEIDVP SKITEDGDDC EGCLSRSLDG KKATDVRLAA IAVGTAGRGG LGKLSIRGSN SAKVSDLGLR SIGRSCPSLG SLSLWNVSTI TDNGLLEIAE
201: GCAQLEKLEL NRCSTITDKG LVAIAKSCPN LTELTLEACS RIGDEGLLAI ARSCSKLKSV SIKNCPLVRD QGIASLLSNT TCSLAKLKLQ MLNVTDVSLA
301: VVGHYGLSIT DLVLAGLSHV SEKGFWVMGN GVGLQKLNSL TITACQGVTD MGLESVGKGC PNMKKAIISK SPLLSDNGLV SFAKASLSLE SLQLEECHRV
401: TQFGFFGSLL NCGEKLKAFS LVNCLSIRDL TTGLPASSHC SALRSLSIRN CPGFGDANLA AIGKLCPQLE DIDLCGLKGI TESGFLHLIQ SSLVKINFSG
501: CSNLTDRVIS AITARNGWTL EVLNIDGCSN ITDASLVSIA ANCQILSDLD ISKCAISDSG IQALASSDKL KLQILSVAGC SMVTDKSLPA IVGLGSTLLG
601: LNLQQCRSIS NSTVDFLVER LYKCDILS

Arabidopsis Description

EBF1EIN3-binding F-box protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SKK0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.