Factsheet for Zm00001d051219_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG30697	Sorghum	cytosol	93.77	92.65
TraesCS6D01G216400.1	Wheat	cytosol	80.34	80.34
TraesCS6B01G262900.1	Wheat	cytosol	80.34	80.34
HORVU6Hr1G059950.1	Barley	cytosol	79.62	79.62
TraesCS6A01G234100.2	Wheat	cytosol	79.38	79.38
Os02t0636400-01	Rice	cytosol	37.65	78.5
GSMUA_Achr5P19410_001	Banana	cytosol	64.51	63.29
GSMUA_Achr8P13910_001	Banana	mitochondrion	53.72	63.28
VIT_10s0071g00310.t01	Wine grape	cytosol	55.64	56.17
AT5G23340.1	Thale cress	cytosol	54.2	55.8
Bra009671.1-P	Field mustard	cytosol	53.96	55.56
CDX88014	Canola	cytosol	53.72	55.31
CDY46953	Canola	cytosol	53.96	54.74
Bra029367.1-P	Field mustard	cytosol	53.96	54.74
PGSC0003DMT400029999	Potato	cytosol	54.68	54.55
CDY40798	Canola	cytosol	53.72	54.5
Solyc04g008980.2.1	Tomato	cytosol	54.68	54.29
KRG90608	Soybean	cytosol	52.52	52.39
KRH36149	Soybean	cytosol	52.28	52.03
CDY45764	Canola	cytosol, peroxisome, plastid	53.72	38.42
CDY29091	Canola	plastid	15.35	36.99
KRH16153	Soybean	cytosol	21.58	36.29
Zm00001d015974_P002	Maize	cytosol	18.7	21.79
Zm00001d038224_P004	Maize	cytosol	18.94	21.47
Zm00001d041635_P002	Maize	cytosol	32.13	20.21
Zm00001d023825_P001	Maize	cytosol	31.65	20.0
Zm00001d048695_P001	Maize	cytosol	29.5	18.98
Zm00001d019677_P001	Maize	cytosol	23.26	18.48
Zm00001d007294_P001	Maize	cytosol	17.99	18.47
Zm00001d000224_P001	Maize	cytosol	18.94	18.24
Zm00001d007640_P001	Maize	cytosol	25.66	17.04
Zm00001d053642_P001	Maize	cytosol	26.14	16.74
Zm00001d015778_P001	Maize	cytosol	25.42	16.49
Zm00001d044622_P002	Maize	mitochondrion	26.62	15.77
Zm00001d028552_P001	Maize	cytosol, extracellular, mitochondrion, plastid	8.39	15.77
Zm00001d005072_P003	Maize	mitochondrion	27.34	15.72
Zm00001d039723_P001	Maize	cytosol, extracellular, plastid	8.63	15.45
Zm00001d003103_P001	Maize	plastid	19.18	15.38
Zm00001d025812_P001	Maize	plastid	19.66	15.02
Zm00001d025808_P001	Maize	plastid	19.42	14.84
Zm00001d037295_P001	Maize	mitochondrion	8.63	14.75
Zm00001d036880_P003	Maize	cytosol	24.22	13.72
Zm00001d000408_P001	Maize	cytosol	23.26	13.06

Protein Annotations

EnsemblPlants:Zm00001d051219_P001	EnsemblPlants:Zm00001d051219_T001	EnsemblPlantsGene:Zm00001d051219	Gene3D:3.80.10.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_Cys-con_subtyp
PANTHER:PTHR45191	PFAM:PF13516	ProteinID:AQK53843.1	SEG:seg	SMART:SM00367	SUPFAM:SSF52047
UniParc:UPI0002211B67	UniProt:K7UXB8	MapMan:35.1	:	:	:

Description

RNI-like superfamily protein

Coordinates

chr4:-:148978271..148980970

Molecular Weight (calculated)

44686.3 Da

IEP (calculated)

7.675

GRAVY (calculated)

0.140

Length

417 amino acids

Sequence
(BLAST)

001: MSVPPPAGGG AIINEVLTDD ELRAVLRRLG PEAERDAFGL VCRRWLRIQS SERRRLRARA GPDMLRRLAA RFPGVLDLDL SQSPSRSFYP GVIDDDLNVI
101: ASSFRNLRVL ALQNCKGISD VGVAKLGDGL PSLQSLDVSR CIKLSDKGLK AVALGCKKLS QLQIMGCKLV TDNLLTALSK SCLQLVELGA AGCNSITDAG
201: ISALADGCHH IKSLDISKCN KVSDPGVCKI AEVSSSCLVS IKLLDCSKVG DKSIYSLAKF CSNLETLVIG GCRNISDGSI QALALACSSS LRSLRMDWCL
301: KITDTSLQSL LSNCKLLVAI DVGCCDQITD NAFMDGEGYG FQSELRVLKI SSCVRLTVAG VGRVIESFKA LEYLDVRSCP QVTRDSCEQA GVQFPAGCKV
401: NFDGSLLESD PSAEMFF

Best Arabidopsis Sequence Match ( AT5G23340.1 )
(BLAST)

001: MSSVCVNEAL TDDELRWVLS RLDSDKDKEV FGLVCKRWLN LQSTDRKKLA ARAGPHMLRR LASRFTQIVE LDLSQSISRS FYPGVTDSDL AVISEGFKFL
101: RVLNLHNCKG ITDTGLASIG RCLSLLQFLD VSYCRKLSDK GLSAVAEGCH DLRALHLAGC RFITDESLKS LSERCRDLEA LGLQGCTNIT DSGLADLVKG
201: CRKIKSLDIN KCSNVGDAGV SSVAKACASS LKTLKLLDCY KVGNESISSL AQFCKNLETL IIGGCRDISD ESIMLLADSC KDSLKNLRMD WCLNISDSSL
301: SCILKQCKNL EALDIGCCEE VTDTAFRDLG SDDVLGLKVL KVSNCTKITV TGIGKLLDKC SSLEYIDVRS LPHVTEVRCS EAGLEFPKCC KVNFSGSLTE
401: PDVLL

Arabidopsis Description

At5g23340/MKD15_20 [Source:UniProtKB/TrEMBL;Acc:Q9FMW7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.