Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc06g030620.1.1 | Tomato | cytosol | 43.27 | 52.74 |
| Solyc06g030610.1.1 | Tomato | cytosol | 53.47 | 47.81 |
| PGSC0003DMT400089433 | Potato | mitochondrion | 58.37 | 31.15 |
| PGSC0003DMT400042949 | Potato | cytosol | 55.1 | 24.46 |
| HORVU1Hr1G089690.1 | Barley | cytosol, extracellular, mitochondrion | 24.49 | 22.56 |
| KRH05167 | Soybean | cytosol | 53.06 | 21.31 |
| PGSC0003DMT400040977 | Potato | nucleus | 56.73 | 20.78 |
| KRH15886 | Soybean | cytosol | 53.06 | 20.19 |
| HORVU5Hr1G000950.4 | Barley | plastid | 35.1 | 19.24 |
| VIT_04s0008g05470.t01 | Wine grape | cytosol | 52.24 | 19.19 |
| AT5G25350.1 | Thale cress | cytosol | 47.76 | 18.78 |
| KRH52439 | Soybean | cytosol, nucleus, peroxisome | 48.16 | 18.5 |
| Bra009835.1-P | Field mustard | cytosol | 46.12 | 18.17 |
| KRH61771 | Soybean | cytosol | 46.94 | 18.08 |
| CDX88173 | Canola | cytosol | 45.71 | 18.01 |
| HORVU7Hr1G090240.1 | Barley | cytosol | 39.59 | 18.0 |
| CDX87090 | Canola | cytosol | 44.9 | 17.86 |
| Bra036542.1-P | Field mustard | cytosol | 44.9 | 17.86 |
| AT2G25490.1 | Thale cress | plastid | 45.71 | 17.83 |
| GSMUA_Achr9P28510_001 | Banana | cytosol, nucleus, peroxisome | 47.35 | 17.74 |
| CDX76980 | Canola | cytosol | 43.27 | 17.7 |
| PGSC0003DMT400007545 | Potato | cytosol | 45.31 | 17.43 |
| CDX80503 | Canola | cytosol | 44.08 | 17.39 |
| CDY19807 | Canola | cytosol | 43.67 | 17.37 |
| HORVU5Hr1G029670.1 | Barley | mitochondrion | 36.33 | 17.35 |
| PGSC0003DMT400079445 | Potato | cytosol, nucleus, peroxisome | 44.9 | 17.13 |
| CDY35358 | Canola | cytosol | 43.27 | 17.01 |
| GSMUA_Achr6P05220_001 | Banana | cytosol | 44.9 | 16.82 |
| Bra034254.1-P | Field mustard | cytosol | 42.45 | 16.72 |
| GSMUA_Achr10P... | Banana | extracellular, plasma membrane, plastid | 45.31 | 16.62 |
| EER90022 | Sorghum | cytosol, plastid | 42.45 | 16.61 |
| GSMUA_Achr4P30680_001 | Banana | cytosol | 44.08 | 16.56 |
| Zm00001d015778_P001 | Maize | cytosol | 42.86 | 16.33 |
| TraesCS6A01G181900.1 | Wheat | cytosol | 42.86 | 16.18 |
| HORVU6Hr1G038430.3 | Barley | plastid | 42.86 | 16.08 |
| TraesCS7A01G377500.1 | Wheat | cytosol | 42.45 | 16.02 |
| TraesCS6D01G169200.1 | Wheat | cytosol | 42.45 | 16.02 |
| TraesCS6B01G210700.1 | Wheat | cytosol | 42.45 | 16.02 |
| TraesCS7B01G278800.1 | Wheat | cytosol | 42.04 | 15.92 |
| TraesCS7D01G373800.1 | Wheat | cytosol | 42.04 | 15.82 |
| Zm00001d053642_P001 | Maize | cytosol | 42.04 | 15.82 |
| EES06473 | Sorghum | cytosol, peroxisome, plasma membrane | 42.04 | 15.73 |
| Os02t0200900-01 | Rice | cytosol | 41.63 | 15.45 |
| Zm00001d036880_P003 | Maize | cytosol | 43.27 | 14.4 |
| Zm00001d000408_P001 | Maize | cytosol | 42.45 | 14.0 |
| GSMUA_Achr2P15920_001 | Banana | cytosol, peroxisome, plastid | 35.92 | 13.17 |
| Os06t0605900-01 | Rice | cytosol | 33.06 | 12.92 |
| PGSC0003DMT400053176 | Potato | cytosol | 19.18 | 12.05 |
| PGSC0003DMT400063955 | Potato | cytosol, extracellular, nucleus | 16.33 | 11.73 |
| PGSC0003DMT400030966 | Potato | cytosol, plasma membrane, plastid | 27.76 | 10.23 |
| PGSC0003DMT400029999 | Potato | cytosol | 16.73 | 9.81 |
| PGSC0003DMT400063732 | Potato | cytosol | 22.86 | 8.74 |
| PGSC0003DMT400079115 | Potato | cytosol | 20.0 | 8.07 |
| PGSC0003DMT400064250 | Potato | mitochondrion | 17.55 | 7.82 |
| PGSC0003DMT400008648 | Potato | cytosol | 4.9 | 7.19 |
| PGSC0003DMT400053918 | Potato | cytosol | 15.92 | 7.1 |
| PGSC0003DMT400074998 | Potato | cytosol | 9.8 | 6.94 |
| PGSC0003DMT400091765 | Potato | cytosol | 16.73 | 5.81 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400094835 | EnsemblPlantsGene:PGSC0003DMG400044406 | Gene3D:3.80.10.10 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt_Cys-con_subtyp | PANTHER:PTHR44327 | PANTHER:PTHR44327:SF1 | PGSC:PGSC0003DMG400044406 |
| SMART:SM00367 | SUPFAM:SSF52047 | TMHMM:TMhelix | UniParc:UPI000295C143 | UniProt:M1DUZ7 | MapMan:11.5.2.6 |
| MapMan:19.2.2.8.1.4.2 | : | : | : | : | : |
Description
Ein3-binding f-box protein 3 [Source:PGSC_GENE;Acc:PGSC0003DMG400044406]
Coordinates
chr6:+:23619559..23620296
Molecular Weight (calculated)
26738.8 Da
IEP (calculated)
5.276
GRAVY (calculated)
0.489
Length
245 amino acids
Sequence
(BLAST)
(BLAST)
001: MLLSSIRNDE IAESNGIEGE GYLVRSVFGR ETTDFRVTAI AVGPTNGGGL AKLSIRGNNH CCGVTDIGLE AIARGCPTLR DLTLWNVSFV GDKGLSEISL
101: GYHLLEKLDL FQCPTITDKS LLDIVKNCRA VTTLTIDSCS NIGNDSLKAV GQYCLNLKIV VLKICPLIRD HGIAVLFYLA SNVLTEVRLQ GLCLSDLSLG
201: ILFNCCTKLE TLSLVSFIGV EDYPLIWWLL VANHLYLWLF AIVLA
101: GYHLLEKLDL FQCPTITDKS LLDIVKNCRA VTTLTIDSCS NIGNDSLKAV GQYCLNLKIV VLKICPLIRD HGIAVLFYLA SNVLTEVRLQ GLCLSDLSLG
201: ILFNCCTKLE TLSLVSFIGV EDYPLIWWLL VANHLYLWLF AIVLA
001: MSQIFSFAGE NDFYRRGAIY PNPKDASLLL SLGSFADVYF PPSKRSRVVA PTIFSAFEKK PVSIDVLPDE CLFEIFRRLS GPQERSACAF VSKQWLTLVS
101: SIRQKEIDVP SKITEDGDDC EGCLSRSLDG KKATDVRLAA IAVGTAGRGG LGKLSIRGSN SAKVSDLGLR SIGRSCPSLG SLSLWNVSTI TDNGLLEIAE
201: GCAQLEKLEL NRCSTITDKG LVAIAKSCPN LTELTLEACS RIGDEGLLAI ARSCSKLKSV SIKNCPLVRD QGIASLLSNT TCSLAKLKLQ MLNVTDVSLA
301: VVGHYGLSIT DLVLAGLSHV SEKGFWVMGN GVGLQKLNSL TITACQGVTD MGLESVGKGC PNMKKAIISK SPLLSDNGLV SFAKASLSLE SLQLEECHRV
401: TQFGFFGSLL NCGEKLKAFS LVNCLSIRDL TTGLPASSHC SALRSLSIRN CPGFGDANLA AIGKLCPQLE DIDLCGLKGI TESGFLHLIQ SSLVKINFSG
501: CSNLTDRVIS AITARNGWTL EVLNIDGCSN ITDASLVSIA ANCQILSDLD ISKCAISDSG IQALASSDKL KLQILSVAGC SMVTDKSLPA IVGLGSTLLG
601: LNLQQCRSIS NSTVDFLVER LYKCDILS
101: SIRQKEIDVP SKITEDGDDC EGCLSRSLDG KKATDVRLAA IAVGTAGRGG LGKLSIRGSN SAKVSDLGLR SIGRSCPSLG SLSLWNVSTI TDNGLLEIAE
201: GCAQLEKLEL NRCSTITDKG LVAIAKSCPN LTELTLEACS RIGDEGLLAI ARSCSKLKSV SIKNCPLVRD QGIASLLSNT TCSLAKLKLQ MLNVTDVSLA
301: VVGHYGLSIT DLVLAGLSHV SEKGFWVMGN GVGLQKLNSL TITACQGVTD MGLESVGKGC PNMKKAIISK SPLLSDNGLV SFAKASLSLE SLQLEECHRV
401: TQFGFFGSLL NCGEKLKAFS LVNCLSIRDL TTGLPASSHC SALRSLSIRN CPGFGDANLA AIGKLCPQLE DIDLCGLKGI TESGFLHLIQ SSLVKINFSG
501: CSNLTDRVIS AITARNGWTL EVLNIDGCSN ITDASLVSIA ANCQILSDLD ISKCAISDSG IQALASSDKL KLQILSVAGC SMVTDKSLPA IVGLGSTLLG
601: LNLQQCRSIS NSTVDFLVER LYKCDILS
Arabidopsis Description
EBF1EIN3-binding F-box protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SKK0]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.