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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX88173 Canola cytosol 86.84 86.98
Bra009835.1-P Field mustard cytosol 86.52 86.66
CDX80503 Canola cytosol 86.36 86.63
CDX87090 Canola cytosol 84.27 85.23
Bra036542.1-P Field mustard cytosol 83.31 84.25
CDY19807 Canola cytosol 82.83 83.77
KRH15886 Soybean cytosol 60.03 58.07
AT2G25490.1 Thale cress plastid 57.62 57.17
KRH05167 Soybean cytosol 54.41 55.57
KRH61771 Soybean cytosol 56.34 55.19
VIT_04s0008g05470.t01 Wine grape cytosol 58.27 54.42
KRH52439 Soybean cytosol, nucleus, peroxisome 55.7 54.39
PGSC0003DMT400040977 Potato nucleus 57.46 53.51
Solyc08g060810.2.1 Tomato plastid 56.02 52.48
GSMUA_Achr4P30680_001 Banana cytosol 50.4 48.16
PGSC0003DMT400094835 Potato cytosol 18.78 47.76
GSMUA_Achr6P05220_001 Banana cytosol 49.92 47.55
GSMUA_Achr9P28510_001 Banana cytosol, nucleus, peroxisome 49.28 46.94
GSMUA_Achr10P... Banana extracellular, plasma membrane, plastid 50.24 46.86
EES06473 Sorghum cytosol, peroxisome, plasma membrane 48.15 45.8
PGSC0003DMT400089433 Potato mitochondrion 33.71 45.75
Zm00001d053642_P001 Maize cytosol 47.67 45.62
Zm00001d015778_P001 Maize cytosol 46.71 45.26
TraesCS6D01G169200.1 Wheat cytosol 47.03 45.15
HORVU7Hr1G090240.1 Barley cytosol 39.0 45.08
Solyc06g049010.1.1 Tomato plastid 44.78 45.0
PGSC0003DMT400042949 Potato cytosol 39.81 44.93
TraesCS6A01G181900.1 Wheat cytosol 46.71 44.84
HORVU1Hr1G089690.1 Barley cytosol, extracellular, mitochondrion 19.1 44.74
EER90022 Sorghum cytosol, plastid 44.94 44.73
TraesCS6B01G210700.1 Wheat cytosol 46.55 44.68
Os02t0200900-01 Rice cytosol 47.19 44.55
HORVU6Hr1G038430.3 Barley plastid 46.55 44.41
GSMUA_Achr2P15920_001 Banana cytosol, peroxisome, plastid 47.03 43.86
TraesCS7B01G278800.1 Wheat cytosol 44.62 42.97
TraesCS7D01G373800.1 Wheat cytosol 44.62 42.7
TraesCS7A01G377500.1 Wheat cytosol 44.3 42.53
Os06t0605900-01 Rice cytosol 41.89 41.63
Solyc06g030610.1.1 Tomato cytosol 17.82 40.51
Solyc06g030620.1.1 Tomato cytosol 12.52 38.81
Zm00001d036880_P003 Maize cytosol 44.46 37.64
HORVU5Hr1G029670.1 Barley mitochondrion 30.5 37.04
Zm00001d000408_P001 Maize cytosol 44.14 37.01
HORVU5Hr1G000950.4 Barley plastid 25.52 35.57
AT4G15475.1 Thale cress cytosol 23.76 24.26
AT5G23340.1 Thale cress cytosol 15.73 24.2
AT1G77000.1 Thale cress cytosol 13.64 23.61
AT1G21410.1 Thale cress cytosol 12.84 22.22
AT1G47056.1 Thale cress cytosol, plastid 18.14 21.81
AT3G58530.1 Thale cress cytosol 12.36 21.81
AT3G07550.2 Thale cress cytosol 13.64 21.52
AT5G01720.1 Thale cress vacuole 22.95 21.5
AT3G50080.1 Thale cress cytosol 17.34 20.69
AT5G67250.1 Thale cress cytosol 17.34 20.49
AT5G27920.1 Thale cress cytosol, extracellular, peroxisome 21.03 20.41
AT4G07400.1 Thale cress nucleus 17.82 20.04
Protein Annotations
MapMan:11.5.2.6MapMan:19.2.2.8.1.4.2Gene3D:3.80.10.10EntrezGene:832607EMBL:AC006258ProteinID:AED93429.1
EMBL:AJ609239EMBL:AK227858ArrayExpress:AT5G25350EnsemblPlantsGene:AT5G25350RefSeq:AT5G25350TAIR:AT5G25350
RefSeq:AT5G25350-TAIR-GEnsemblPlants:AT5G25350.1TAIR:AT5G25350.1EMBL:AY485830Symbol:EBF2InterPro:F-box-like_dom_sf
InterPro:F-box_domGO:GO:0003674GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005634GO:GO:0006464GO:GO:0006511GO:GO:0007154GO:GO:0007165
GO:GO:0008150GO:GO:0008152GO:GO:0009056GO:GO:0009719GO:GO:0009723GO:GO:0009873
GO:GO:0009987GO:GO:0010105GO:GO:0016567GO:GO:0019005GO:GO:0019538InterPro:IPR001611
InterPro:IPR001810InterPro:IPR032675InterPro:LRR_dom_sfInterPro:Leu-rich_rptInterPro:Leu-rich_rpt_Cys-con_subtypRefSeq:NP_197917.1
PFAM:PF00646PFAM:PF13516PO:PO:0000013PO:PO:0000014PO:PO:0000037PO:PO:0000084
PO:PO:0000230PO:PO:0000293PO:PO:0001054PO:PO:0001078PO:PO:0001081PO:PO:0001185
PO:PO:0004507PO:PO:0007064PO:PO:0007095PO:PO:0007098PO:PO:0007103PO:PO:0007115
PO:PO:0007123PO:PO:0007611PO:PO:0007616PO:PO:0008019PO:PO:0009001PO:PO:0009005
PO:PO:0009006PO:PO:0009009PO:PO:0009010PO:PO:0009025PO:PO:0009029PO:PO:0009030
PO:PO:0009031PO:PO:0009032PO:PO:0009046PO:PO:0009047PO:PO:0009052PO:PO:0020030
PO:PO:0020038PO:PO:0020100PO:PO:0020137PO:PO:0025022PO:PO:0025281PANTHER:PTHR44327
PANTHER:PTHR44327:SF1UniProt:Q708Y0SMART:SM00256SMART:SM00367SUPFAM:SSF52047SUPFAM:SSF81383
UniParc:UPI0000162590SEG:seg::::
Description
EBF2EIN3-binding F-box protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q708Y0]
Coordinates
chr5:-:8794252..8797349
Molecular Weight (calculated)
66065.0 Da
IEP (calculated)
7.811
GRAVY (calculated)
0.151
Length
623 amino acids
Sequence
(BLAST)
001: MSGIFRFSGD EDCLLGGSMY LSPGSCPGVY YPARKRLRVA ATSFYSGFEE KQTSIDVLPE ECLFEILRRL PSGQERSACA CVSKHWLNLL SSISRSEVNE
101: SSVQDVEEGE GFLSRSLEGK KATDLRLAAI AVGTSSRGGL GKLQIRGSGF ESKVTDVGLG AVAHGCPSLR IVSLWNLPAV SDLGLSEIAR SCPMIEKLDL
201: SRCPGITDSG LVAIAENCVN LSDLTIDSCS GVGNEGLRAI ARRCVNLRSI SIRSCPRIGD QGVAFLLAQA GSYLTKVKLQ MLNVSGLSLA VIGHYGAAVT
301: DLVLHGLQGV NEKGFWVMGN AKGLKKLKSL SVMSCRGMTD VGLEAVGNGC PDLKHVSLNK CLLVSGKGLV ALAKSALSLE SLKLEECHRI NQFGLMGFLM
401: NCGSKLKAFS LANCLGISDF NSESSLPSPS CSSLRSLSIR CCPGFGDASL AFLGKFCHQL QDVELCGLNG VTDAGVRELL QSNNVGLVKV NLSECINVSD
501: NTVSAISVCH GRTLESLNLD GCKNITNASL VAVAKNCYSV NDLDISNTLV SDHGIKALAS SPNHLNLQVL SIGGCSSITD KSKACIQKLG RTLLGLNIQR
601: CGRISSSTVD TLLENLWRCD ILY
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.