Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G56160.1 | KRH10163 | AT1G73730.1 | 18218967 |
| AT1G56160.1 | KRH23176 | AT1G73730.1 | 18218967 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH43737 | Soybean | nucleus | 75.94 | 67.88 |
| CDX73800 | Canola | nucleus | 20.87 | 60.5 |
| CDY55883 | Canola | nucleus | 35.07 | 57.89 |
| CDY35101 | Canola | nucleus | 34.78 | 57.69 |
| CDX79305 | Canola | nucleus | 38.84 | 54.25 |
| CDX88513 | Canola | nucleus | 40.0 | 51.11 |
| CDX87403 | Canola | nucleus | 39.71 | 50.74 |
| Bra035097.1-P | Field mustard | nucleus | 39.42 | 50.37 |
| Bra003619.1-P | Field mustard | nucleus | 38.84 | 50.19 |
| CDX68004 | Canola | nucleus | 38.84 | 50.19 |
| AT1G16490.1 | Thale cress | nucleus | 38.55 | 48.54 |
| Bra026720.1-P | Field mustard | nucleus | 38.84 | 48.03 |
| Solyc10g005550.1.1 | Tomato | nucleus | 33.62 | 47.74 |
| PGSC0003DMT400029235 | Potato | nucleus | 33.04 | 47.7 |
| CDX81764 | Canola | nucleus | 38.55 | 47.67 |
| CDY51002 | Canola | nucleus | 38.55 | 47.67 |
| KRH56057 | Soybean | nucleus | 21.45 | 46.25 |
| Bra026048.1-P | Field mustard | nucleus | 37.39 | 45.58 |
| PGSC0003DMT400089342 | Potato | nucleus | 31.3 | 44.81 |
| CDY24243 | Canola | nucleus | 30.43 | 44.49 |
| Bra001472.1-P | Field mustard | nucleus | 29.86 | 44.21 |
| Bra039344.1-P | Field mustard | nucleus | 30.14 | 43.88 |
| CDY43399 | Canola | nucleus | 30.14 | 43.88 |
| CDY00800 | Canola | nucleus | 27.54 | 43.58 |
| AT3G12820.1 | Thale cress | nucleus | 30.14 | 43.51 |
| AT1G79180.2 | Thale cress | nucleus | 40.0 | 42.2 |
| KRH34142 | Soybean | nucleus | 25.22 | 41.43 |
| KRH68789 | Soybean | nucleus | 24.93 | 41.15 |
| KRG97042 | Soybean | nucleus | 25.22 | 41.04 |
| KRH22481 | Soybean | nucleus | 26.67 | 40.53 |
| CDY35097 | Canola | nucleus | 15.65 | 39.13 |
| AT1G56160.1 | Thale cress | nucleus | 33.33 | 38.85 |
| CDY42408 | Canola | nucleus | 33.62 | 38.8 |
| CDY10506 | Canola | nucleus | 33.62 | 38.8 |
| Bra030812.1-P | Field mustard | nucleus | 33.62 | 38.8 |
| VIT_19s0085g00050.t01 | Wine grape | nucleus | 40.87 | 38.74 |
| KRH56060 | Soybean | nucleus | 25.51 | 38.26 |
| KRH32183 | Soybean | nucleus | 26.09 | 37.97 |
| KRG92419 | Soybean | nucleus | 28.99 | 36.76 |
| KRH25458 | Soybean | nucleus | 24.93 | 36.75 |
| KRH31704 | Soybean | nucleus | 28.12 | 36.74 |
| KRH67378 | Soybean | nucleus | 31.01 | 36.39 |
| KRH69121 | Soybean | nucleus | 27.83 | 36.36 |
| KRG95664 | Soybean | nucleus | 30.43 | 36.08 |
| KRH34387 | Soybean | nucleus | 28.7 | 36.0 |
| KRH56061 | Soybean | nucleus | 25.22 | 35.95 |
| KRH56056 | Soybean | nucleus | 23.77 | 34.89 |
| KRH25468 | Soybean | nucleus | 22.9 | 33.76 |
| KRH26874 | Soybean | nucleus | 23.19 | 31.87 |
| KRH25461 | Soybean | nucleus | 26.09 | 29.51 |
| KRH56059 | Soybean | nucleus | 27.25 | 29.01 |
| KRH26875 | Soybean | nucleus | 26.09 | 28.75 |
| KRH56058 | Soybean | nucleus | 26.09 | 28.3 |
| KRH25459 | Soybean | nucleus | 24.35 | 27.91 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | UniProt:A0A0R0GES0 | EMBL:ACUP02009782 | EnsemblPlantsGene:GLYMA_15G259400 | GO:GO:0000981 |
| GO:GO:0001135 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006357 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0030154 | GO:GO:0043565 |
| GO:GO:0044212 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | EnsemblPlants:KRH13720 | ProteinID:KRH13720 | ProteinID:KRH13720.1 |
| InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF923 | InterPro:SANT/Myb |
| SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0006EDB3E0 | : | : | : |
Description
hypothetical protein
Coordinates
chr15:+:49185213..49187748
Molecular Weight (calculated)
40038.6 Da
IEP (calculated)
7.932
GRAVY (calculated)
-0.803
Length
345 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKGRAPCCD KTQVKRGPWS PAEDLKLIAF IQKYGHENWR ALPKQAGLLR CGKSCRLRWI NYLRPDVKRG NFTPEEEETI IRLHKALGNK WSKIASGLPG
101: RTDNEIKNVW NTHLKKRLAP KKVSEQVLMN PSQNHQSLPP LPHHLNHFSP MRDQIHQRPP HLVTMNSMTK LRNYQWKIKW TRIQKNNCPT NLLTSLRIQK
201: RHYDVGSILE EVDKPNHLIE IPWEPDYDFW KLLDDDNSLG SFQSNEVQLG EFPAIQNIIL GEEGVHDAEA KKWSHDFENE FGVVGGIKES SKDHFLPKNY
301: AVEPEMDHTQ AFDFDDIDMA RPESELDFGY IQLWPSCPQN NNTSL
101: RTDNEIKNVW NTHLKKRLAP KKVSEQVLMN PSQNHQSLPP LPHHLNHFSP MRDQIHQRPP HLVTMNSMTK LRNYQWKIKW TRIQKNNCPT NLLTSLRIQK
201: RHYDVGSILE EVDKPNHLIE IPWEPDYDFW KLLDDDNSLG SFQSNEVQLG EFPAIQNIIL GEEGVHDAEA KKWSHDFENE FGVVGGIKES SKDHFLPKNY
301: AVEPEMDHTQ AFDFDDIDMA RPESELDFGY IQLWPSCPQN NNTSL
001: MGKGRAPCCD KTKVKRGPWS PEEDIKLISF IQKFGHENWR SLPKQSGLLR CGKSCRLRWI NYLRPDLKRG NFTSEEEETI IKLHHNYGNK WSKIASQLPG
101: RTDNEIKNVW HTHLKKRLAQ SSGTADEPAS PCSSDSVSRG KDDKSSHVED SLNRETNHRN ELSTSMSSGG SNQQDDPKID ELRFEYIEEA YSEFNDIIIQ
201: EVDKPDLLEI PFDSDPDIWS FLDTSNSFQQ STANENSSGS RATTEEESDE DEVKKWFKHL ESELGLEEDD NQQQYKEEES SSSSLLKNYE LMIH
101: RTDNEIKNVW HTHLKKRLAQ SSGTADEPAS PCSSDSVSRG KDDKSSHVED SLNRETNHRN ELSTSMSSGG SNQQDDPKID ELRFEYIEEA YSEFNDIIIQ
201: EVDKPDLLEI PFDSDPDIWS FLDTSNSFQQ STANENSSGS RATTEEESDE DEVKKWFKHL ESELGLEEDD NQQQYKEEES SSSSLLKNYE LMIH
Arabidopsis Description
ATMYB63myb domain protein 63 [Source:TAIR;Acc:AT1G79180]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.