Factsheet for Bra026048.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY35101	Canola	nucleus	73.14	99.52
CDY55883	Canola	nucleus	71.73	97.13
AT1G16490.1	Thale cress	nucleus	73.5	75.91
Bra026720.1-P	Field mustard	nucleus	72.44	73.48
Bra003619.1-P	Field mustard	nucleus	58.66	62.17
Bra035097.1-P	Field mustard	nucleus	58.3	61.11
PGSC0003DMT400029235	Potato	nucleus	38.52	45.61
Solyc10g005550.1.1	Tomato	nucleus	38.52	44.86
PGSC0003DMT400089342	Potato	nucleus	38.16	44.81
Bra001472.1-P	Field mustard	nucleus	33.22	40.34
Bra030812.1-P	Field mustard	nucleus	41.7	39.46
Bra022831.1-P	Field mustard	nucleus	34.28	39.43
VIT_19s0085g00050.t01	Wine grape	nucleus	50.53	39.29
Bra021708.1-P	Field mustard	nucleus	34.63	39.2
Bra039344.1-P	Field mustard	nucleus	32.51	38.82
Bra015481.1-P	Field mustard	nucleus	34.28	38.49
Bra018267.1-P	Field mustard	nucleus	33.57	37.55
KRH13720	Soybean	nucleus	45.58	37.39
KRH43737	Soybean	nucleus	49.47	36.27
Bra014929.1-P	Field mustard	nucleus	35.34	35.09
Bra023742.1-P	Field mustard	nucleus	33.92	34.16
Bra001907.1-P	Field mustard	nucleus	33.57	33.22

Protein Annotations

EnsemblPlants:Bra026048.1	EnsemblPlants:Bra026048.1-P	EnsemblPlantsGene:Bra026048	Gene3D:1.10.10.60	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom	InterPro:SANT/Myb
PANTHER:PTHR10641	PANTHER:PTHR10641:SF462	PFAM:PF00249	PFscan:PS51294	SEG:seg	SMART:SM00717
SUPFAM:SSF46689	UniParc:UPI000253F206	UniProt:M4EB89	MapMan:15.5.2.1	:	:

Description

AT1G16490 (E=4e-109) ATMYB58, MYB58 | MYB58 (MYB DOMAIN PROTEIN 58); DNA binding / transcription activator/ transcription factor

Coordinates

chrA06:-:6337444..6338476

Molecular Weight (calculated)

32263.7 Da

IEP (calculated)

6.912

GRAVY (calculated)

-0.935

Length

283 amino acids

Sequence
(BLAST)

001: MGKGRAPCCD KTKVKRGQWS YDEDLKLISF INKYGHENWR SLPEQAGLLR CGKSCRLRWI NYLRPDVKRG NFSVEEEETI IKLHQSIGSK WSKIASKLPG
101: RTDNEIKNVW HTHLKKRLSS NTNLNADRDE AATKGSLNRE ETSQESSPNA SMSSGGSKIS SKEDGVQIGQ TFQYLEGHSE VTKTLQEVDK PELLEISFGV
201: DPEIWSFING LDSFQQPENS LAPRAHQDSQ EDEVEKWFKH LETELGLEEN DSQQQRSIVM LTKNHSHHHL GELRALDKPL TKP

Best Arabidopsis Sequence Match ( AT1G16490.1 )
(BLAST)

001: MGKGRAPCCD KTKVKRGPWS HDEDLKLISF IHKNGHENWR SLPKQAGLLR CGKSCRLRWI NYLRPDVKRG NFSAEEEDTI IKLHQSFGNK WSKIASKLPG
101: RTDNEIKNVW HTHLKKRLSS ETNLNADEAG SKGSLNEEEN SQESSPNASM SFAGSNISSK DDDAQISQMF EHILTYSEFT GMLQEVDKPE LLEMPFDLDP
201: DIWSFIDGSD SFQQPENRAL QESEEDEVDK WFKHLESELG LEENDNQQQQ QQHKQGTEDE HSSSLLESYE LLIH

Arabidopsis Description

MYB58Transcription factor MYB58 [Source:UniProtKB/Swiss-Prot;Acc:Q9SA47]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.