Factsheet for Bra023742.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY08989	Canola	nucleus	92.17	98.11
CDY35519	Canola	nucleus	86.83	97.21
Bra001907.1-P	Field mustard	nucleus	82.56	81.12
AT3G23250.1	Thale cress	nucleus	81.85	80.7
Bra014929.1-P	Field mustard	nucleus	81.85	80.7
Bra021708.1-P	Field mustard	nucleus	43.42	48.8
Bra022831.1-P	Field mustard	nucleus	41.64	47.56
Bra015481.1-P	Field mustard	nucleus	42.35	47.22
Bra018267.1-P	Field mustard	nucleus	41.99	46.64
Bra039344.1-P	Field mustard	nucleus	32.03	37.97
Bra001472.1-P	Field mustard	nucleus	30.61	36.91
Bra003619.1-P	Field mustard	nucleus	34.88	36.7
Bra035097.1-P	Field mustard	nucleus	35.23	36.67
Bra026720.1-P	Field mustard	nucleus	36.3	36.56
Bra026048.1-P	Field mustard	nucleus	34.16	33.92
Bra030812.1-P	Field mustard	nucleus	32.38	30.43

Protein Annotations

EnsemblPlants:Bra023742.1	EnsemblPlants:Bra023742.1-P	EnsemblPlantsGene:Bra023742	Gene3D:1.10.10.60	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom	InterPro:SANT/Myb
PANTHER:PTHR10641	PANTHER:PTHR10641:SF695	PFAM:PF00249	PFscan:PS51294	SEG:seg	SMART:SM00717
SUPFAM:SSF46689	UniParc:UPI0002543D94	UniProt:M4E4N9	MapMan:15.5.2.1	:	:

Description

AT3G23250 (E=1e-105) MYB15, ATY19, ATMYB15 | MYB15 (MYB DOMAIN PROTEIN 15); DNA binding / transcription factor

Coordinates

chrA01:-:19517862..19519075

Molecular Weight (calculated)

31854.1 Da

IEP (calculated)

6.185

GRAVY (calculated)

-0.847

Length

281 amino acids

Sequence
(BLAST)

001: MGRAPCCEKM GLNRGPWTPE EDQILVSFIH QHGHSNWRAL PKQAGLLRCG KSCRLRWMNY LKPDIKRGNF TQAEEDAIIS LHQILGNRWS AIAAKLPGRT
101: DNEIKNVWHT HLKKRLEDYQ PAKPKTSNKK KSTKPKSQSV PAKSKSTKTE SELASSSNPS FESLFSASPS ASDEVSSETL TSHEGHSKEA QMDNKLREMI
201: TTTDQDSFSF INFGEDIDQS FWNETLYSQD EENHTSNLDE MKQEFQHLGS VGNEMIFDSE MDFWFDVLPR SGGEQDILAG L

Best Arabidopsis Sequence Match ( AT3G23250.1 )
(BLAST)

001: MGRAPCCEKM GLKRGPWTPE EDQILVSFIL NHGHSNWRAL PKQAGLLRCG KSCRLRWMNY LKPDIKRGNF TKEEEDAIIS LHQILGNRWS AIAAKLPGRT
101: DNEIKNVWHT HLKKRLEDYQ PAKPKTSNKK KGTKPKSESV ITSSNSTRSE SELADSSNPS GESLFSTSPS TSEVSSMTLI SHDGYSNEIN MDNKPGDIST
201: IDQECVSFET FGADIDESFW KETLYSQDEH NYVSNDLEVA GLVEIQQEFQ NLGSANNEMI FDSEMDFWFD VLARTGGEQD LLAGL

Arabidopsis Description

MYB15Transcription factor MYB15 [Source:UniProtKB/Swiss-Prot;Acc:Q9LTC4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.