Factsheet for Bra001907.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX92979	Canola	nucleus	93.71	98.89
Bra014929.1-P	Field mustard	nucleus	87.41	87.72
AT3G23250.1	Thale cress	nucleus	83.22	83.51
Bra023742.1-P	Field mustard	nucleus	81.12	82.56
Bra021708.1-P	Field mustard	nucleus	43.71	50.0
Bra022831.1-P	Field mustard	nucleus	41.26	47.97
Bra018267.1-P	Field mustard	nucleus	42.31	47.83
Bra015481.1-P	Field mustard	nucleus	41.26	46.83
Bra039344.1-P	Field mustard	nucleus	32.17	38.82
Bra001472.1-P	Field mustard	nucleus	31.47	38.63
Bra026720.1-P	Field mustard	nucleus	36.36	37.28
Bra003619.1-P	Field mustard	nucleus	34.62	37.08
Bra035097.1-P	Field mustard	nucleus	34.97	37.04
Bra026048.1-P	Field mustard	nucleus	33.22	33.57
Bra030812.1-P	Field mustard	nucleus	33.22	31.77

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.1	EnsemblPlantsGene:Bra001907	EnsemblPlants:Bra001907.1	EnsemblPlants:Bra001907.1-P	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	InterPro:Homeobox-like_sf	InterPro:IPR017930	UniProt:M4CCH7
InterPro:Myb_dom	PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR10641	PANTHER:PTHR10641:SF695	InterPro:SANT/Myb
SMART:SM00717	SUPFAM:SSF46689	UniParc:UPI0002540747	:	:	:

Description

AT3G23250 (E=1e-138) MYB15, ATY19, ATMYB15 | MYB15 (MYB DOMAIN PROTEIN 15); DNA binding / transcription factor

Coordinates

chrA03:+:19295200..19296380

Molecular Weight (calculated)

32143.3 Da

IEP (calculated)

5.409

GRAVY (calculated)

-0.782

Length

286 amino acids

Sequence
(BLAST)

001: MGRAPCCEKM GLQRGPWTPE EDQILISFIH KHGHSNWRAL PKQAGLLRCG KSCRLRWMNY LKPDIKRGNF TKEEGDAIIS LHQVLGNRWS AIAAKLPGRT
101: DNEIKNVWHT HLKKRLEDYQ PAKPKSSNKK QGTKPKSPSA AAKLNSTRSE SELGNSSNPS FESLFSASPS TSDEVSSVTL MSHEGHNNEA KMDNKLGDIS
201: TADQDCFSFE NFGADIDESF WNEALYSQDE HNYASNLEVT GFDDETQQEF QQLGSVGNEM VFDSEMDFWY DVFVRTGGEQ ELLAGI

Best Arabidopsis Sequence Match ( AT3G23250.1 )
(BLAST)

001: MGRAPCCEKM GLKRGPWTPE EDQILVSFIL NHGHSNWRAL PKQAGLLRCG KSCRLRWMNY LKPDIKRGNF TKEEEDAIIS LHQILGNRWS AIAAKLPGRT
101: DNEIKNVWHT HLKKRLEDYQ PAKPKTSNKK KGTKPKSESV ITSSNSTRSE SELADSSNPS GESLFSTSPS TSEVSSMTLI SHDGYSNEIN MDNKPGDIST
201: IDQECVSFET FGADIDESFW KETLYSQDEH NYVSNDLEVA GLVEIQQEFQ NLGSANNEMI FDSEMDFWFD VLARTGGEQD LLAGL

Arabidopsis Description

MYB15Transcription factor MYB15 [Source:UniProtKB/Swiss-Prot;Acc:Q9LTC4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.