Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra001907.1-P | Field mustard | nucleus | 98.89 | 93.71 |
| CDY35519 | Canola | nucleus | 78.6 | 84.86 |
| CDX85074 | Canola | nucleus | 87.82 | 83.51 |
| CDX77536 | Canola | nucleus | 87.45 | 83.16 |
| CDY08989 | Canola | nucleus | 77.86 | 79.92 |
| AT3G23250.1 | Thale cress | nucleus | 83.76 | 79.65 |
| CDX69310 | Canola | nucleus | 15.5 | 62.69 |
| CDX73800 | Canola | nucleus | 24.72 | 56.3 |
| CDY15424 | Canola | nucleus | 42.44 | 52.04 |
| CDY57089 | Canola | nucleus | 45.02 | 48.8 |
| CDX84795 | Canola | nucleus | 42.8 | 47.15 |
| CDY23952 | Canola | nucleus | 42.44 | 46.75 |
| CDY70982 | Canola | nucleus | 43.54 | 46.64 |
| CDY10182 | Canola | nucleus | 42.8 | 46.4 |
| CDY47723 | Canola | nucleus | 42.8 | 46.03 |
| CDY35101 | Canola | nucleus | 30.63 | 39.9 |
| CDY55883 | Canola | nucleus | 30.63 | 39.71 |
| CDY00800 | Canola | nucleus | 31.73 | 39.45 |
| CDX79305 | Canola | nucleus | 35.79 | 39.27 |
| CDY24243 | Canola | nucleus | 33.95 | 38.98 |
| CDY43399 | Canola | nucleus | 33.95 | 38.82 |
| CDY35097 | Canola | nucleus | 18.82 | 36.96 |
| CDX81764 | Canola | nucleus | 38.01 | 36.92 |
| CDX88513 | Canola | nucleus | 36.53 | 36.67 |
| CDY51002 | Canola | nucleus | 37.64 | 36.56 |
| CDX68004 | Canola | nucleus | 35.79 | 36.33 |
| CDX87403 | Canola | nucleus | 36.16 | 36.3 |
| CDY42408 | Canola | nucleus | 35.42 | 32.11 |
| CDY10506 | Canola | nucleus | 35.42 | 32.11 |
| CDY15425 | Canola | nucleus | 7.38 | 18.69 |
| CDX73801 | Canola | nucleus | 1.11 | 4.48 |
Protein Annotations
| EnsemblPlants:CDX92979 | EnsemblPlantsGene:GSBRNA2T00154860001 | Gene3D:1.10.10.60 | GO:A0A078DX15 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF695 | PFAM:PF00249 | PFscan:PS51294 | ProteinID:CDX92979 | ProteinID:CDX92979.1 |
| SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0004EE2F67 | MapMan:15.5.2.1 | : | : |
Description
BnaA03g37010D
Coordinates
chrLK031874:+:450519..451819
Molecular Weight (calculated)
30624.7 Da
IEP (calculated)
6.050
GRAVY (calculated)
-0.823
Length
271 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRAPCCEKM GLQRGPWTPE EDQILISFIH KHGHSNWRAL PKQAGLLRCG KSCRLRWMNY LKPDIKRGNF TKEEEDAIIS LHQVLGNRWS AIAAKLPGRT
101: DNEIKNVWHT HLKKRLEDYQ PAKPKSSNKK QGTKPKSQSA AAKLNSTRSE SELGNSSNPS FESLFSASPS TSDEVSSVTL MSHEGHNNEA KMDNKLGDIN
201: IDESFWNEAL YSQDEHNYAS NLEVTGFDDE TQQEFQQLGS VGNEMVFDSE MDFWYDVFVR TGGEQELLAG I
101: DNEIKNVWHT HLKKRLEDYQ PAKPKSSNKK QGTKPKSQSA AAKLNSTRSE SELGNSSNPS FESLFSASPS TSDEVSSVTL MSHEGHNNEA KMDNKLGDIN
201: IDESFWNEAL YSQDEHNYAS NLEVTGFDDE TQQEFQQLGS VGNEMVFDSE MDFWYDVFVR TGGEQELLAG I
001: MGRAPCCEKM GLKRGPWTPE EDQILVSFIL NHGHSNWRAL PKQAGLLRCG KSCRLRWMNY LKPDIKRGNF TKEEEDAIIS LHQILGNRWS AIAAKLPGRT
101: DNEIKNVWHT HLKKRLEDYQ PAKPKTSNKK KGTKPKSESV ITSSNSTRSE SELADSSNPS GESLFSTSPS TSEVSSMTLI SHDGYSNEIN MDNKPGDIST
201: IDQECVSFET FGADIDESFW KETLYSQDEH NYVSNDLEVA GLVEIQQEFQ NLGSANNEMI FDSEMDFWFD VLARTGGEQD LLAGL
101: DNEIKNVWHT HLKKRLEDYQ PAKPKTSNKK KGTKPKSESV ITSSNSTRSE SELADSSNPS GESLFSTSPS TSEVSSMTLI SHDGYSNEIN MDNKPGDIST
201: IDQECVSFET FGADIDESFW KETLYSQDEH NYVSNDLEVA GLVEIQQEFQ NLGSANNEMI FDSEMDFWFD VLARTGGEQD LLAGL
Arabidopsis Description
MYB15Transcription factor MYB15 [Source:UniProtKB/Swiss-Prot;Acc:Q9LTC4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.