Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY57089 | Canola | nucleus | 100.0 | 42.8 |
| CDY15424 | Canola | nucleus | 66.36 | 32.13 |
| CDX84795 | Canola | nucleus | 69.16 | 30.08 |
| CDY70982 | Canola | nucleus | 70.09 | 29.64 |
| CDY23952 | Canola | nucleus | 65.42 | 28.46 |
| CDY10182 | Canola | nucleus | 48.6 | 20.8 |
| CDY47723 | Canola | nucleus | 47.66 | 20.24 |
| CDY08989 | Canola | nucleus | 21.5 | 8.71 |
| CDX85074 | Canola | nucleus | 22.43 | 8.42 |
| CDX77536 | Canola | nucleus | 22.43 | 8.42 |
| CDY35519 | Canola | nucleus | 19.63 | 8.37 |
| CDX92979 | Canola | nucleus | 18.69 | 7.38 |
| CDY35101 | Canola | nucleus | 12.15 | 6.25 |
| CDY55883 | Canola | nucleus | 11.21 | 5.74 |
| CDX79305 | Canola | nucleus | 12.15 | 5.26 |
| CDX68004 | Canola | nucleus | 12.15 | 4.87 |
| CDX88513 | Canola | nucleus | 12.15 | 4.81 |
| CDX87403 | Canola | nucleus | 12.15 | 4.81 |
| CDX81764 | Canola | nucleus | 9.35 | 3.58 |
| CDY51002 | Canola | nucleus | 9.35 | 3.58 |
| CDY10506 | Canola | nucleus | 9.35 | 3.34 |
| CDY42408 | Canola | nucleus | 9.35 | 3.34 |
| CDY35097 | Canola | nucleus | 3.74 | 2.9 |
| CDY43399 | Canola | nucleus | 3.74 | 1.69 |
| CDX69310 | Canola | nucleus | 0.93 | 1.49 |
| CDX73801 | Canola | nucleus | 0.93 | 1.49 |
| CDY00800 | Canola | nucleus | 2.8 | 1.38 |
| CDY24243 | Canola | nucleus | 2.8 | 1.27 |
| CDX73800 | Canola | nucleus | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY15425 | EnsemblPlantsGene:GSBRNA2T00085740001 | ProteinID:CDY15425 | ProteinID:CDY15425.1 | SEG:seg | UniParc:UPI0004EECC68 |
| UniProt:A0A078FLW6 | MapMan:35.1 | : | : | : | : |
Description
BnaC04g41980DBnaC04g41980D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FLW6]
Coordinates
chrLK032054:+:766029..766352
Molecular Weight (calculated)
12494.0 Da
IEP (calculated)
4.058
GRAVY (calculated)
-0.874
Length
107 amino acids
Sequence
(BLAST)
(BLAST)
001: MVYTTSPQQF SNSTTTLDIS DNNNKDDTMS HEDISALVDE SFWSEVVSVD NSSNNEKKIE GWEGLLERNS KRHSYNNSKL YNDDMEFWFD LFTSCRRIEA
101: FSDIPEF
101: FSDIPEF
001: MGRAPCCEKM GVKRGPWTPE EDQILINYIH LYGHSNWRAL PKHAGLLRCG KSCRLRWINY LRPDIKRGNF TPQEEQTIIN LHESLGNRWS AIAAKLPGRT
101: DNEIKNVWHT HLKKRLSKNL NNGGDTKDVN GINETTNEDK GSVIVDTASL QQFSNSITTF DISNDNKDDI MSYEDISALI DDSFWSDVIS VDNSNKNEKK
201: IEDWEGLIDR NSKKCSYSNS KLYNDDMEFW FDVFTSNRRI EEFSDIPEF
101: DNEIKNVWHT HLKKRLSKNL NNGGDTKDVN GINETTNEDK GSVIVDTASL QQFSNSITTF DISNDNKDDI MSYEDISALI DDSFWSDVIS VDNSNKNEKK
201: IEDWEGLIDR NSKKCSYSNS KLYNDDMEFW FDVFTSNRRI EEFSDIPEF
Arabidopsis Description
MYB14Transcription factor MYB14 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJX8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.