Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY00800 | Canola | nucleus | 91.04 | 27.98 |
| CDY43399 | Canola | nucleus | 77.61 | 21.94 |
| CDY24243 | Canola | nucleus | 76.12 | 21.61 |
| CDY10506 | Canola | nucleus | 25.37 | 5.69 |
| CDY42408 | Canola | nucleus | 23.88 | 5.35 |
| CDY51002 | Canola | nucleus | 17.91 | 4.3 |
| CDX81764 | Canola | nucleus | 17.91 | 4.3 |
| CDX87403 | Canola | nucleus | 16.42 | 4.07 |
| CDX88513 | Canola | nucleus | 14.93 | 3.7 |
| Os04t0517100-01 | Rice | nucleus | 8.96 | 3.37 |
| CDX73800 | Canola | nucleus | 5.97 | 3.36 |
| GSMUA_Achr4P28850_001 | Banana | nucleus | 13.43 | 3.31 |
| GSMUA_Achr6P31520_001 | Banana | nucleus | 11.94 | 3.28 |
| GSMUA_Achr11P... | Banana | nucleus | 13.43 | 3.14 |
| CDX79305 | Canola | nucleus | 10.45 | 2.83 |
| GSMUA_Achr2P18090_001 | Banana | nucleus | 11.94 | 2.64 |
| TraesCS6B01G292500.1 | Wheat | nucleus | 11.94 | 2.42 |
| CDY35101 | Canola | nucleus | 7.46 | 2.4 |
| CDY55883 | Canola | nucleus | 7.46 | 2.39 |
| TraesCS6D01G249200.1 | Wheat | nucleus | 11.94 | 2.38 |
| Zm00001d051520_P001 | Maize | nucleus | 11.94 | 2.35 |
| EES05685 | Sorghum | nucleus | 13.43 | 2.32 |
| CDX68004 | Canola | nucleus | 8.96 | 2.25 |
| TraesCS2D01G444200.1 | Wheat | nucleus | 10.45 | 2.21 |
| Zm00001d032694_P001 | Maize | nucleus | 8.96 | 2.21 |
| Os04t0594100-01 | Rice | nucleus | 11.94 | 2.16 |
| Zm00001d026204_P001 | Maize | nucleus | 10.45 | 2.13 |
| Os02t0695200-01 | Rice | nucleus | 10.45 | 2.06 |
| TraesCS6D01G211100.1 | Wheat | nucleus | 7.46 | 1.99 |
| GSMUA_Achr5P03520_001 | Banana | nucleus | 8.96 | 1.98 |
| TraesCS6A01G224200.1 | Wheat | nucleus | 7.46 | 1.98 |
| TraesCS2B01G466400.1 | Wheat | nucleus | 10.45 | 1.97 |
| TraesCS6B01G257200.1 | Wheat | nucleus | 7.46 | 1.97 |
| TraesCS6D01G211400.1 | Wheat | nucleus | 7.46 | 1.97 |
| TraesCS6A01G224000.1 | Wheat | nucleus | 7.46 | 1.95 |
| TraesCS6A01G224100.1 | Wheat | nucleus | 7.46 | 1.95 |
| TraesCS2B01G466500.1 | Wheat | nucleus | 10.45 | 1.94 |
| TraesCS6A01G265300.1 | Wheat | nucleus | 7.46 | 1.91 |
| Zm00001d026203_P001 | Maize | nucleus | 10.45 | 1.83 |
| TraesCS6D01G210500.1 | Wheat | nucleus | 5.97 | 1.67 |
| TraesCS6A01G224400.1 | Wheat | nucleus | 5.97 | 1.66 |
| TraesCS2D01G444300.1 | Wheat | nucleus | 8.96 | 1.65 |
| TraesCS6D01G210900.1 | Wheat | nucleus | 5.97 | 1.65 |
| HORVU6Hr1G058580.1 | Barley | nucleus | 5.97 | 1.65 |
| TraesCS6B01G257000.1 | Wheat | nucleus | 5.97 | 1.65 |
| TraesCS6D01G211200.1 | Wheat | nucleus | 5.97 | 1.64 |
| TraesCS2A01G445500.1 | Wheat | nucleus | 8.96 | 1.63 |
| TraesCS6A01G224300.1 | Wheat | nucleus | 5.97 | 1.6 |
| EES12768 | Sorghum | nucleus | 8.96 | 1.6 |
| HORVU6Hr1G067380.1 | Barley | nucleus | 10.45 | 1.59 |
| TraesCS6B01G257100.1 | Wheat | nucleus | 5.97 | 1.59 |
| TraesCS2B01G399200.1 | Wheat | nucleus | 7.46 | 1.58 |
| TraesCS2D01G378400.2 | Wheat | nucleus | 7.46 | 1.58 |
| TraesCS6B01G257300.1 | Wheat | nucleus | 5.97 | 1.58 |
| Os02t0624300-01 | Rice | nucleus | 5.97 | 1.55 |
| Zm00001d051149_P001 | Maize | nucleus | 5.97 | 1.54 |
| TraesCS2A01G381900.2 | Wheat | nucleus | 7.46 | 1.53 |
| Zm00001d002476_P001 | Maize | nucleus | 8.96 | 1.48 |
| EES12516 | Sorghum | nucleus | 5.97 | 1.47 |
| CDY35097 | Canola | nucleus | 2.99 | 1.45 |
| Zm00001d014029_P001 | Maize | nucleus | 5.97 | 1.44 |
| HORVU6Hr1G058620.1 | Barley | nucleus | 5.97 | 1.38 |
| HORVU6Hr1G058630.3 | Barley | nucleus, plastid | 5.97 | 1.37 |
| TraesCS6D01G210800.1 | Wheat | nucleus | 4.48 | 1.37 |
| EER91482 | Sorghum | nucleus | 5.97 | 1.35 |
| GSMUA_Achr4P27350_001 | Banana | nucleus | 5.97 | 1.33 |
| HORVU6Hr1G058640.1 | Barley | nucleus | 4.48 | 1.23 |
| Zm00001d017268_P001 | Maize | nucleus | 4.48 | 1.23 |
| EES07173 | Sorghum | nucleus | 4.48 | 1.16 |
| CDX92979 | Canola | nucleus | 4.48 | 1.11 |
| Zm00001d025864_P001 | Maize | nucleus | 4.48 | 1.08 |
| Zm00001d003064_P001 | Maize | nucleus | 4.48 | 1.02 |
| CDY15425 | Canola | nucleus | 1.49 | 0.93 |
| CDY23952 | Canola | nucleus | 2.99 | 0.81 |
| CDX84795 | Canola | nucleus | 2.99 | 0.81 |
| CDY10182 | Canola | nucleus | 2.99 | 0.8 |
| CDY35519 | Canola | nucleus | 2.99 | 0.8 |
| CDY47723 | Canola | nucleus | 2.99 | 0.79 |
| CDY70982 | Canola | nucleus | 2.99 | 0.79 |
| TraesCS1B01G172500.1 | Wheat | nucleus | 2.99 | 0.77 |
| TraesCS1D01G154000.1 | Wheat | nucleus | 2.99 | 0.76 |
| TraesCS1A01G155300.1 | Wheat | nucleus | 2.99 | 0.76 |
| CDY08989 | Canola | nucleus | 2.99 | 0.76 |
| Os10t0478300-01 | Rice | nucleus | 2.99 | 0.72 |
| CDX85074 | Canola | nucleus | 2.99 | 0.7 |
| CDX77536 | Canola | nucleus | 2.99 | 0.7 |
| CDY57089 | Canola | nucleus | 1.49 | 0.4 |
| CDY15424 | Canola | nucleus | 0.0 | 0.0 |
| CDX69310 | Canola | nucleus | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDX73801 | EnsemblPlantsGene:GSBRNA2T00111494001 | ProteinID:CDX73801 | ProteinID:CDX73801.1 | UniParc:UPI0004EE43DA | MapMan:35.1 |
Description
BnaA03g32460D
Coordinates
chrLK031800:+:5051..5254
Molecular Weight (calculated)
7787.2 Da
IEP (calculated)
3.932
GRAVY (calculated)
-0.346
Length
67 amino acids
Sequence
(BLAST)
(BLAST)
1: MACGFEVNAP QSLEFLFEDR QIPPLPISKP ESLEIHMQSH DELCSRMVEP GLDVYNEWLS YFDNQTL
001: MRCGKSCRLR WINYLRPGLK RGNFTKEEED TIIHLHQAYG NKWSKIASNF PGRTDNEIKN VWNTHLKKRL VKRSISSSSS DVTNHSVSST SSSSSSISSV
101: LQDVIIKSER PNQEEEFGEI LVEQMACGFE VDAPQSLECL FDDSQVPPPI SKPDSLQTHG KSSDHEFWSR LIEPGFDDYN EWLIFLDNQT C
101: LQDVIIKSER PNQEEEFGEI LVEQMACGFE VDAPQSLECL FDDSQVPPPI SKPDSLQTHG KSSDHEFWSR LIEPGFDDYN EWLIFLDNQT C
Arabidopsis Description
AtMYB10Transcription factor MYB10 [Source:UniProtKB/Swiss-Prot;Acc:Q9LTV4]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.