Factsheet for HORVU6Hr1G058630.3

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

plastid 3
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plastid
Any Predictor:	nucleus, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	nucleus
TargetP:	plastid
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU0Hr1G001280.1
HORVU2Hr1G016740.4
HORVU3Hr1G038010.1
HORVU3Hr1G079210.4
HORVU4Hr1G026290.3
HORVU5Hr1G014060.1
HORVU5Hr1G014070.2
HORVU5Hr1G044710.4

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G31180.1	HORVU0Hr1G001280.1	AT2G41090.1	17360592
AT2G31180.1	HORVU2Hr1G016740.4	AT2G41090.1	17360592
AT2G31180.1	HORVU3Hr1G038010.1	AT2G41090.1	17360592
AT2G31180.1	HORVU3Hr1G079210.4	AT2G41090.1	17360592
AT2G31180.1	HORVU4Hr1G026290.3	AT2G41090.1	17360592
AT2G31180.1	HORVU5Hr1G014060.1	AT2G41090.1	17360592
AT2G31180.1	HORVU5Hr1G014070.2	AT2G41090.1	17360592
AT2G31180.1	HORVU5Hr1G044710.4	AT2G41090.1	17360592
AT2G31180.1	HORVU0Hr1G001280.1	AT2G41100.1	17360592
AT2G31180.1	HORVU2Hr1G016740.4	AT2G41100.1	17360592
AT2G31180.1	HORVU3Hr1G038010.1	AT2G41100.1	17360592
AT2G31180.1	HORVU3Hr1G079210.4	AT2G41100.1	17360592
AT2G31180.1	HORVU4Hr1G026290.3	AT2G41100.1	17360592
AT2G31180.1	HORVU5Hr1G014060.1	AT2G41100.1	17360592
AT2G31180.1	HORVU5Hr1G014070.2	AT2G41100.1	17360592
AT2G31180.1	HORVU5Hr1G044710.4	AT2G41100.1	17360592
AT2G31180.1	HORVU0Hr1G001280.1	AT5G21274.1	17360592
AT2G31180.1	HORVU2Hr1G016740.4	AT5G21274.1	17360592
AT2G31180.1	HORVU3Hr1G038010.1	AT5G21274.1	17360592
AT2G31180.1	HORVU3Hr1G079210.4	AT5G21274.1	17360592
AT2G31180.1	HORVU4Hr1G026290.3	AT5G21274.1	17360592
AT2G31180.1	HORVU5Hr1G014060.1	AT5G21274.1	17360592
AT2G31180.1	HORVU5Hr1G014070.2	AT5G21274.1	17360592
AT2G31180.1	HORVU5Hr1G044710.4	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G211100.1	Wheat	nucleus	77.66	90.04
TraesCS6B01G257300.1	Wheat	nucleus	77.66	89.33
TraesCS6D01G211400.1	Wheat	nucleus	77.32	88.58
TraesCS6D01G211200.1	Wheat	nucleus	74.23	88.52
TraesCS6A01G224000.1	Wheat	nucleus	77.66	88.28
TraesCS6B01G257100.1	Wheat	nucleus	76.29	88.1
TraesCS6A01G224300.1	Wheat	nucleus	75.6	88.0
TraesCS6A01G224100.1	Wheat	nucleus	77.32	87.55
TraesCS6B01G257200.1	Wheat	nucleus	75.94	87.01
HORVU6Hr1G058640.1	Barley	nucleus	72.16	86.07
HORVU6Hr1G058580.1	Barley	nucleus	66.32	79.42
HORVU6Hr1G058620.1	Barley	nucleus	77.32	77.59
VIT_05s0049g01010.t01	Wine grape	nucleus	35.74	72.22
Os02t0624300-01	Rice	nucleus	61.17	68.99
Zm00001d017268_P001	Maize	nucleus	57.39	68.44
EES07173	Sorghum	nucleus	60.14	67.83
Zm00001d051149_P001	Maize	nucleus	57.73	64.62
PGSC0003DMT400034263	Potato	mitochondrion	16.15	55.29
KRG97042	Soybean	nucleus	38.49	52.83
KRH68789	Soybean	nucleus	37.8	52.63
AT1G06180.1	Thale cress	nucleus	42.61	50.41
VIT_07s0005g03340.t01	Wine grape	nucleus	46.39	50.19
KRH34142	Soybean	nucleus	36.08	50.0
PGSC0003DMT400060168	Potato	nucleus	37.46	49.55
VIT_05s0049g01020.t01	Wine grape	nucleus	42.96	49.41
PGSC0003DMT400034878	Potato	nucleus	42.27	48.81
KRH56057	Soybean	nucleus	26.8	48.75
Solyc05g055030.1.1	Tomato	nucleus	36.43	48.62
Solyc09g090130.2.1	Tomato	nucleus	44.67	48.51
PGSC0003DMT400044362	Potato	nucleus	44.67	48.51
Bra021708.1-P	Field mustard	nucleus	41.24	48.0
Solyc06g053610.2.1	Tomato	nucleus	43.64	47.92
AT2G31180.1	Thale cress	nucleus	40.89	47.79
PGSC0003DMT400042007	Potato	nucleus	43.99	47.76
Bra022831.1-P	Field mustard	nucleus	39.86	47.15
KRG92419	Soybean	nucleus	43.99	47.06
Solyc03g005570.2.1	Tomato	nucleus	40.21	46.61
KRH69121	Soybean	nucleus	42.27	46.59
Bra015481.1-P	Field mustard	nucleus	40.21	46.43
KRH34387	Soybean	nucleus	43.64	46.18
KRG95664	Soybean	nucleus	45.7	45.7
KRH67378	Soybean	nucleus	46.05	45.58
KRH32183	Soybean	nucleus	37.11	45.57
Bra018267.1-P	Field mustard	nucleus	39.52	45.45
KRH31704	Soybean	nucleus	41.24	45.45
Solyc06g083900.2.1	Tomato	nucleus	38.49	43.92
PGSC0003DMT400051682	Potato	nucleus	38.14	43.02
KRH22481	Soybean	nucleus	32.99	42.29
KRH25458	Soybean	nucleus	33.68	41.88
KRH56060	Soybean	nucleus	32.3	40.87
VIT_12s0134g00480.t01	Wine grape	nucleus	36.08	40.86
KRH56061	Soybean	nucleus	33.33	40.08
PGSC0003DMT400097096	Potato	nucleus	27.84	38.03
PGSC0003DMT400035748	Potato	nucleus	29.9	37.66
Solyc07g054960.1.1	Tomato	nucleus	27.84	37.5
Solyc12g005640.1.1	Tomato	nucleus	29.9	37.34
PGSC0003DMT400067318	Potato	nucleus	30.93	37.04
KRH25468	Soybean	nucleus	29.55	36.75
PGSC0003DMT400067321	Potato	nucleus	30.58	36.33
PGSC0003DMT400097604	Potato	nucleus	26.12	36.19
KRH56056	Soybean	nucleus	29.21	36.17
VIT_12s0134g00490.t01	Wine grape	nucleus	31.27	36.11
PGSC0003DMT400067322	Potato	nucleus	29.9	35.51
Solyc07g055000.1.1	Tomato	nucleus	29.21	35.12
VIT_00s0203g00170.t01	Wine grape	nucleus	32.3	35.07
Solyc07g053230.2.1	Tomato	nucleus	30.24	35.06
PGSC0003DMT400039029	Potato	nucleus	28.87	34.57
Solyc07g053240.2.1	Tomato	nucleus	29.55	34.54
KRH26874	Soybean	nucleus	29.55	34.26
Solyc03g093940.1.1	Tomato	nucleus	25.09	33.64
Solyc06g033870.1.1	Tomato	nucleus	27.49	32.39
Solyc06g034000.1.1	Tomato	nucleus	26.12	32.2
PGSC0003DMT400093355	Potato	nucleus	26.46	31.95
Solyc03g093930.2.1	Tomato	nucleus	26.12	31.02
PGSC0003DMT400051510	Potato	nucleus	25.77	30.86
PGSC0003DMT400051513	Potato	nucleus	26.12	30.77
Solyc03g093890.2.1	Tomato	nucleus	26.46	30.43
KRH56058	Soybean	nucleus	32.65	29.87
KRH56059	Soybean	nucleus	32.99	29.63
PGSC0003DMT400021498	Potato	nucleus	24.4	29.58
KRH25461	Soybean	nucleus	30.93	29.51
KRH26875	Soybean	nucleus	31.62	29.39
PGSC0003DMT400086165	Potato	nucleus	28.87	29.27
PGSC0003DMT400070912	Potato	nucleus	25.77	28.85
KRH25459	Soybean	nucleus	28.18	27.24
HORVU6Hr1G067380.1	Barley	nucleus	39.18	25.85
PGSC0003DMT400021503	Potato	nucleus	16.84	25.52
PGSC0003DMT400021501	Potato	nucleus	17.18	25.38
Solyc07g054980.1.1	Tomato	nucleus	31.27	19.44
CDX73801	Canola	nucleus	1.37	5.97

Protein Annotations

EnsemblPlants:HORVU6Hr1G058630.3	EnsemblPlantsGene:HORVU6Hr1G058630	Gene3D:1.10.10.60	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom	InterPro:SANT/Myb	PANTHER:PTHR10641
PANTHER:PTHR10641:SF695	PFAM:PF00249	PFscan:PS51294	SEG:seg	SMART:SM00717	SUPFAM:SSF46689
UniParc:UPI000B47BB89	UniProt:A0A287UAU8	MapMan:15.5.2.1	:	:	:

Description

No Description!

Coordinates

chrchr6H:-:384007936..384009310

Molecular Weight (calculated)

32155.4 Da

IEP (calculated)

8.069

GRAVY (calculated)

-0.822

Length

291 amino acids

Sequence
(BLAST)

001: PQHPTPFPRP SVNTTEHSAT HPSGHHTRTR HTARREEKRR EERIQSAATM VRAPCCEKMG LKRGPWTAEE DMTLVAHIEQ HGHSNWRALP KQAGLLRCGK
101: SCRLRWINYL RPDIKRGNFT GEEEDAIIQL HAMLGNRWST IAARLPGRTD NEIKNVWHTH LKKRLQSSSK PSGQAAPKRK AKKPAVATSA LEGPTSQPAS
201: SPGQSLPMSP EQSLSTSSAT DSSSSESEEF QIDDSFWSET LAMSVDSSGS GLETSDTFGA DSASPSSSND EMDFWVTLFM QASDMHSLSQ I

Best Arabidopsis Sequence Match ( AT2G31180.1 )
(BLAST)

001: MGRAPCCEKM GVKRGPWTPE EDQILINYIH LYGHSNWRAL PKHAGLLRCG KSCRLRWINY LRPDIKRGNF TPQEEQTIIN LHESLGNRWS AIAAKLPGRT
101: DNEIKNVWHT HLKKRLSKNL NNGGDTKDVN GINETTNEDK GSVIVDTASL QQFSNSITTF DISNDNKDDI MSYEDISALI DDSFWSDVIS VDNSNKNEKK
201: IEDWEGLIDR NSKKCSYSNS KLYNDDMEFW FDVFTSNRRI EEFSDIPEF

Arabidopsis Description

MYB14Transcription factor MYB14 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJX8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.