Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc09g090130.2.1 | Tomato | nucleus | 95.15 | 95.15 |
| GSMUA_Achr4P18180_001 | Banana | nucleus | 40.3 | 73.97 |
| PGSC0003DMT400042007 | Potato | nucleus | 62.69 | 62.69 |
| PGSC0003DMT400034263 | Potato | mitochondrion | 18.66 | 58.82 |
| PGSC0003DMT400034878 | Potato | nucleus | 55.22 | 58.73 |
| GSMUA_Achr1P09180_001 | Banana | nucleus | 48.51 | 56.52 |
| PGSC0003DMT400060168 | Potato | nucleus | 44.4 | 54.09 |
| GSMUA_Achr4P21910_001 | Banana | nucleus | 44.03 | 53.88 |
| TraesCS6D01G211100.1 | Wheat | nucleus | 50.37 | 53.78 |
| GSMUA_Achr5P03920_001 | Banana | nucleus | 48.13 | 53.75 |
| Zm00001d017268_P001 | Maize | nucleus | 48.88 | 53.69 |
| EES07173 | Sorghum | nucleus | 51.49 | 53.49 |
| TraesCS6D01G210900.1 | Wheat | nucleus | 48.13 | 53.31 |
| GSMUA_Achr5P14600_001 | Banana | nucleus | 45.15 | 52.84 |
| TraesCS6D01G211200.1 | Wheat | nucleus | 47.76 | 52.46 |
| HORVU6Hr1G058640.1 | Barley | nucleus | 47.76 | 52.46 |
| TraesCS6B01G257300.1 | Wheat | nucleus | 49.25 | 52.17 |
| TraesCS6D01G210500.1 | Wheat | nucleus | 46.64 | 52.08 |
| TraesCS6B01G257000.1 | Wheat | nucleus | 47.01 | 51.85 |
| TraesCS6B01G257100.1 | Wheat | nucleus | 48.51 | 51.59 |
| GSMUA_Achr11P... | Banana | nucleus | 45.15 | 51.49 |
| TraesCS6A01G224400.1 | Wheat | nucleus | 46.27 | 51.45 |
| VIT_07s0005g03340.t01 | Wine grape | nucleus | 51.49 | 51.3 |
| TraesCS6D01G211400.1 | Wheat | nucleus | 48.51 | 51.18 |
| TraesCS6A01G224000.1 | Wheat | nucleus | 48.88 | 51.17 |
| Os02t0624300-01 | Rice | nucleus | 49.25 | 51.16 |
| Zm00001d051149_P001 | Maize | nucleus | 49.63 | 51.15 |
| TraesCS6A01G224200.1 | Wheat | nucleus | 48.13 | 50.99 |
| TraesCS6A01G224300.1 | Wheat | nucleus | 47.39 | 50.8 |
| TraesCS6B01G257200.1 | Wheat | nucleus | 48.13 | 50.79 |
| HORVU6Hr1G058580.1 | Barley | nucleus | 45.9 | 50.62 |
| TraesCS6A01G224100.1 | Wheat | nucleus | 48.13 | 50.19 |
| TraesCS6D01G210800.1 | Wheat | nucleus | 39.93 | 48.86 |
| EES12516 | Sorghum | nucleus | 49.25 | 48.53 |
| KRG95664 | Soybean | nucleus | 52.61 | 48.45 |
| KRH67378 | Soybean | nucleus | 52.61 | 47.96 |
| KRH32183 | Soybean | nucleus | 41.42 | 46.84 |
| Zm00001d025864_P001 | Maize | nucleus | 48.13 | 46.57 |
| PGSC0003DMT400051682 | Potato | nucleus | 44.03 | 45.74 |
| TraesCS1A01G155300.1 | Wheat | nucleus | 44.03 | 44.87 |
| HORVU6Hr1G058620.1 | Barley | nucleus | 48.51 | 44.83 |
| HORVU6Hr1G058630.3 | Barley | nucleus, plastid | 48.51 | 44.67 |
| Zm00001d003064_P001 | Maize | nucleus | 48.88 | 44.56 |
| TraesCS1D01G154000.1 | Wheat | nucleus | 43.28 | 44.11 |
| TraesCS1B01G172500.1 | Wheat | nucleus | 42.54 | 43.85 |
| TraesCS2B01G399200.1 | Wheat | nucleus | 49.25 | 41.77 |
| TraesCS2D01G378400.2 | Wheat | nucleus | 48.88 | 41.46 |
| Os10t0478300-01 | Rice | nucleus | 42.16 | 40.94 |
| Zm00001d032694_P001 | Maize | nucleus | 41.42 | 40.81 |
| TraesCS2A01G381900.2 | Wheat | nucleus | 49.25 | 40.37 |
| Zm00001d014029_P001 | Maize | nucleus | 41.42 | 39.93 |
| GSMUA_Achr11P... | Banana | nucleus | 44.78 | 39.6 |
| PGSC0003DMT400067321 | Potato | nucleus | 36.19 | 39.59 |
| PGSC0003DMT400035748 | Potato | nucleus | 33.96 | 39.39 |
| EER91482 | Sorghum | nucleus | 43.28 | 39.19 |
| PGSC0003DMT400067322 | Potato | nucleus | 35.45 | 38.78 |
| GSMUA_Achr4P28850_001 | Banana | nucleus | 39.18 | 38.6 |
| PGSC0003DMT400029235 | Potato | nucleus | 34.33 | 38.49 |
| GSMUA_Achr6P31520_001 | Banana | nucleus | 34.7 | 38.11 |
| PGSC0003DMT400067318 | Potato | nucleus | 34.33 | 37.86 |
| TraesCS6A01G265300.1 | Wheat | nucleus | 36.57 | 37.4 |
| PGSC0003DMT400089342 | Potato | nucleus | 33.58 | 37.34 |
| PGSC0003DMT400039029 | Potato | nucleus | 33.58 | 37.04 |
| GSMUA_Achr2P18090_001 | Banana | nucleus | 41.42 | 36.63 |
| GSMUA_Achr5P18600_001 | Banana | nucleus | 45.15 | 36.34 |
| PGSC0003DMT400093355 | Potato | nucleus | 32.46 | 36.1 |
| GSMUA_Achr5P03520_001 | Banana | nucleus | 40.67 | 35.97 |
| PGSC0003DMT400097096 | Potato | nucleus | 28.36 | 35.68 |
| GSMUA_Achr11P... | Banana | nucleus | 38.06 | 35.54 |
| TraesCS2D01G444200.1 | Wheat | nucleus | 41.79 | 35.33 |
| PGSC0003DMT400097604 | Potato | nucleus | 27.61 | 35.24 |
| GSMUA_Achr4P27350_001 | Banana | nucleus | 38.81 | 34.67 |
| Os04t0517100-01 | Rice | nucleus | 22.76 | 34.27 |
| PGSC0003DMT400051513 | Potato | nucleus | 30.22 | 32.79 |
| PGSC0003DMT400051510 | Potato | nucleus | 29.48 | 32.51 |
| PGSC0003DMT400021498 | Potato | nucleus | 29.1 | 32.5 |
| PGSC0003DMT400070912 | Potato | nucleus | 31.34 | 32.31 |
| Zm00001d026204_P001 | Maize | nucleus | 39.55 | 32.22 |
| TraesCS2B01G466500.1 | Wheat | nucleus | 42.91 | 31.86 |
| TraesCS2B01G466400.1 | Wheat | nucleus | 41.79 | 31.55 |
| Zm00001d051520_P001 | Maize | nucleus | 39.93 | 31.47 |
| Os02t0695200-01 | Rice | nucleus | 39.55 | 31.18 |
| TraesCS2D01G444300.1 | Wheat | nucleus | 41.79 | 30.85 |
| TraesCS2A01G445500.1 | Wheat | nucleus | 42.16 | 30.79 |
| TraesCS6D01G249200.1 | Wheat | nucleus | 38.43 | 30.65 |
| TraesCS6B01G292500.1 | Wheat | nucleus | 37.69 | 30.51 |
| Os04t0594100-01 | Rice | nucleus | 41.04 | 29.65 |
| EES12768 | Sorghum | nucleus | 41.04 | 29.26 |
| Zm00001d026203_P001 | Maize | nucleus | 40.3 | 28.27 |
| EES05685 | Sorghum | nucleus | 40.3 | 27.84 |
| PGSC0003DMT400086165 | Potato | nucleus | 29.1 | 27.18 |
| Zm00001d002476_P001 | Maize | nucleus | 40.3 | 26.67 |
| PGSC0003DMT400021503 | Potato | nucleus | 18.66 | 26.04 |
| PGSC0003DMT400021501 | Potato | nucleus | 19.03 | 25.89 |
| HORVU6Hr1G067380.1 | Barley | nucleus | 38.81 | 23.58 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:102587946 | MapMan:15.5.2.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009409 |
| GO:GO:0009628 | GO:GO:0009651 | GO:GO:0009719 | GO:GO:0009723 | GO:GO:0009733 | GO:GO:0009751 |
| GO:GO:0009753 | GO:GO:0009987 | GO:GO:0045893 | GO:GO:0050826 | InterPro:Homeobox-like_sf | InterPro:IPR017930 |
| UniProt:M1BG28 | InterPro:Myb_dom | PFAM:PF00249 | EnsemblPlantsGene:PGSC0003DMG400017223 | PGSC:PGSC0003DMG400017223 | EnsemblPlants:PGSC0003DMT400044362 |
| PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF695 | InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 |
| UniParc:UPI000294B2E1 | RefSeq:XP_006354484.1 | : | : | : | : |
Description
Protein 2 [Source:PGSC_GENE;Acc:PGSC0003DMG400017223]
Coordinates
chr9:+:56436850..56439237
Molecular Weight (calculated)
30240.5 Da
IEP (calculated)
5.407
GRAVY (calculated)
-0.747
Length
268 amino acids
Sequence
(BLAST)
(BLAST)
001: MVRAPCCEKM GLKKGPWTPE EDQILISYIQ SNGHGNWRAL PKLAGLLRCG KSCRLRWTNY LRPDIKRGNF TREEEDSIIQ LHEMLGNRWS AIAARLPGRT
101: DNEIKNVWHT HLKKRLKNYQ PPQNSKRHSK NNNDSKAPCT SQIALKSSNN FSNIQQDGPG LGSGPNSPQL SSSEMSTVTA DSLAVTMGIS NGSDQMDSSE
201: NFIPEIDESF WTDDLSTSGG EELQVQFPFH DMKQESVEMD VGAKLEDDMD FWYNVFIKSG DLLELPEF
101: DNEIKNVWHT HLKKRLKNYQ PPQNSKRHSK NNNDSKAPCT SQIALKSSNN FSNIQQDGPG LGSGPNSPQL SSSEMSTVTA DSLAVTMGIS NGSDQMDSSE
201: NFIPEIDESF WTDDLSTSGG EELQVQFPFH DMKQESVEMD VGAKLEDDMD FWYNVFIKSG DLLELPEF
001: MGRAPCCEKM GLKRGPWTPE EDQILVSFIL NHGHSNWRAL PKQAGLLRCG KSCRLRWMNY LKPDIKRGNF TKEEEDAIIS LHQILGNRWS AIAAKLPGRT
101: DNEIKNVWHT HLKKRLEDYQ PAKPKTSNKK KGTKPKSESV ITSSNSTRSE SELADSSNPS GESLFSTSPS TSEVSSMTLI SHDGYSNEIN MDNKPGDIST
201: IDQECVSFET FGADIDESFW KETLYSQDEH NYVSNDLEVA GLVEIQQEFQ NLGSANNEMI FDSEMDFWFD VLARTGGEQD LLAGL
101: DNEIKNVWHT HLKKRLEDYQ PAKPKTSNKK KGTKPKSESV ITSSNSTRSE SELADSSNPS GESLFSTSPS TSEVSSMTLI SHDGYSNEIN MDNKPGDIST
201: IDQECVSFET FGADIDESFW KETLYSQDEH NYVSNDLEVA GLVEIQQEFQ NLGSANNEMI FDSEMDFWFD VLARTGGEQD LLAGL
Arabidopsis Description
MYB15Transcription factor MYB15 [Source:UniProtKB/Swiss-Prot;Acc:Q9LTC4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.