Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr4P18180_001 | Banana | nucleus | 47.6 | 74.66 |
| VIT_05s0049g01010.t01 | Wine grape | nucleus | 40.17 | 63.89 |
| PGSC0003DMT400034263 | Potato | mitochondrion | 20.96 | 56.47 |
| GSMUA_Achr4P21910_001 | Banana | nucleus | 53.71 | 56.16 |
| GSMUA_Achr1P09180_001 | Banana | nucleus | 51.97 | 51.74 |
| VIT_05s0049g01020.t01 | Wine grape | nucleus | 56.77 | 51.38 |
| GSMUA_Achr5P03920_001 | Banana | nucleus | 53.71 | 51.25 |
| GSMUA_Achr11P... | Banana | nucleus | 51.97 | 50.64 |
| KRH56057 | Soybean | nucleus | 34.5 | 49.38 |
| KRH34142 | Soybean | nucleus | 43.23 | 47.14 |
| VIT_07s0005g03340.t01 | Wine grape | nucleus | 54.15 | 46.1 |
| KRH31704 | Soybean | nucleus | 52.84 | 45.83 |
| KRH69121 | Soybean | nucleus | 52.84 | 45.83 |
| PGSC0003DMT400042007 | Potato | nucleus | 53.28 | 45.52 |
| Solyc09g090130.2.1 | Tomato | nucleus | 53.28 | 45.52 |
| KRH68789 | Soybean | nucleus | 41.48 | 45.45 |
| PGSC0003DMT400060168 | Potato | nucleus | 43.67 | 45.45 |
| KRG97042 | Soybean | nucleus | 41.92 | 45.28 |
| Solyc06g053610.2.1 | Tomato | nucleus | 52.4 | 45.28 |
| PGSC0003DMT400034878 | Potato | nucleus | 49.78 | 45.24 |
| PGSC0003DMT400044362 | Potato | nucleus | 52.84 | 45.15 |
| Solyc05g055030.1.1 | Tomato | nucleus | 42.36 | 44.5 |
| KRG92419 | Soybean | nucleus | 52.84 | 44.49 |
| AT1G06180.1 | Thale cress | nucleus | 46.72 | 43.5 |
| Solyc03g005570.2.1 | Tomato | nucleus | 47.6 | 43.43 |
| AT2G31180.1 | Thale cress | nucleus | 47.16 | 43.37 |
| KRH34387 | Soybean | nucleus | 51.53 | 42.91 |
| Bra021708.1-P | Field mustard | nucleus | 46.72 | 42.8 |
| KRH56060 | Soybean | nucleus | 41.92 | 41.74 |
| Bra018267.1-P | Field mustard | nucleus | 45.85 | 41.5 |
| KRH22481 | Soybean | nucleus | 41.05 | 41.41 |
| Bra015481.1-P | Field mustard | nucleus | 45.41 | 41.27 |
| Bra022831.1-P | Field mustard | nucleus | 44.1 | 41.06 |
| Solyc06g083900.2.1 | Tomato | nucleus | 45.41 | 40.78 |
| KRG95664 | Soybean | nucleus | 51.53 | 40.55 |
| KRH25458 | Soybean | nucleus | 41.05 | 40.17 |
| PGSC0003DMT400051682 | Potato | nucleus | 44.98 | 39.92 |
| KRH67378 | Soybean | nucleus | 51.09 | 39.8 |
| VIT_12s0134g00480.t01 | Wine grape | nucleus | 44.1 | 39.3 |
| KRH32183 | Soybean | nucleus | 40.61 | 39.24 |
| Solyc03g093940.1.1 | Tomato | nucleus | 36.68 | 38.71 |
| GSMUA_Achr6P31520_001 | Banana | nucleus | 40.17 | 37.7 |
| VIT_12s0134g00490.t01 | Wine grape | nucleus | 41.48 | 37.7 |
| PGSC0003DMT400097604 | Potato | nucleus | 34.5 | 37.62 |
| KRH56061 | Soybean | nucleus | 39.74 | 37.6 |
| Solyc07g054960.1.1 | Tomato | nucleus | 35.37 | 37.5 |
| GSMUA_Achr11P... | Banana | nucleus | 49.34 | 37.29 |
| PGSC0003DMT400067321 | Potato | nucleus | 39.74 | 37.14 |
| PGSC0003DMT400097096 | Potato | nucleus | 34.5 | 37.09 |
| Solyc07g053230.2.1 | Tomato | nucleus | 40.61 | 37.05 |
| PGSC0003DMT400035748 | Potato | nucleus | 37.12 | 36.8 |
| PGSC0003DMT400067322 | Potato | nucleus | 39.3 | 36.73 |
| Solyc07g053240.2.1 | Tomato | nucleus | 39.74 | 36.55 |
| KRH56056 | Soybean | nucleus | 37.12 | 36.17 |
| KRH25468 | Soybean | nucleus | 36.68 | 35.9 |
| PGSC0003DMT400067318 | Potato | nucleus | 37.99 | 35.8 |
| GSMUA_Achr5P18600_001 | Banana | nucleus | 51.97 | 35.74 |
| Solyc12g005640.1.1 | Tomato | nucleus | 36.24 | 35.62 |
| PGSC0003DMT400039029 | Potato | nucleus | 37.55 | 35.39 |
| Solyc07g055000.1.1 | Tomato | nucleus | 37.12 | 35.12 |
| VIT_00s0203g00170.t01 | Wine grape | nucleus | 41.05 | 35.07 |
| KRH26874 | Soybean | nucleus | 38.43 | 35.06 |
| GSMUA_Achr4P28850_001 | Banana | nucleus | 40.61 | 34.19 |
| PGSC0003DMT400093355 | Potato | nucleus | 35.37 | 33.61 |
| Solyc06g033870.1.1 | Tomato | nucleus | 36.24 | 33.6 |
| Solyc06g034000.1.1 | Tomato | nucleus | 34.5 | 33.47 |
| Solyc03g093930.2.1 | Tomato | nucleus | 35.81 | 33.47 |
| GSMUA_Achr11P... | Banana | nucleus | 41.48 | 33.1 |
| GSMUA_Achr5P03520_001 | Banana | nucleus | 42.79 | 32.34 |
| Solyc03g093890.2.1 | Tomato | nucleus | 35.37 | 32.02 |
| GSMUA_Achr2P18090_001 | Banana | nucleus | 42.36 | 32.01 |
| PGSC0003DMT400051513 | Potato | nucleus | 34.06 | 31.58 |
| PGSC0003DMT400021498 | Potato | nucleus | 32.75 | 31.25 |
| PGSC0003DMT400070912 | Potato | nucleus | 35.37 | 31.15 |
| PGSC0003DMT400051510 | Potato | nucleus | 32.31 | 30.45 |
| GSMUA_Achr4P27350_001 | Banana | nucleus | 39.74 | 30.33 |
| KRH25461 | Soybean | nucleus | 40.17 | 30.16 |
| KRH56059 | Soybean | nucleus | 41.48 | 29.32 |
| KRH56058 | Soybean | nucleus | 40.61 | 29.25 |
| PGSC0003DMT400086165 | Potato | nucleus | 36.24 | 28.92 |
| KRH25459 | Soybean | nucleus | 37.55 | 28.57 |
| KRH26875 | Soybean | nucleus | 38.86 | 28.43 |
| PGSC0003DMT400021503 | Potato | nucleus | 22.27 | 26.56 |
| PGSC0003DMT400021501 | Potato | nucleus | 22.71 | 26.4 |
| Solyc07g054980.1.1 | Tomato | nucleus | 40.17 | 19.66 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr5P14600_001 | EnsemblPlants:GSMUA_Achr5T14600_001 | EnsemblPlantsGene:GSMUA_Achr5G14600_001 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF695 | PFAM:PF00249 | PFscan:PS51294 | SEG:seg | SMART:SM00717 |
| SUPFAM:SSF46689 | UniParc:UPI0002949A06 | UniProt:M0SYI9 | MapMan:15.5.2.1 | : | : |
Description
Putative Myb-related protein Myb4 [Source:GMGC_GENE;Acc:GSMUA_Achr5G14600_001]
Coordinates
chr5:-:10539751..10540743
Molecular Weight (calculated)
25489.8 Da
IEP (calculated)
5.738
GRAVY (calculated)
-0.570
Length
229 amino acids
Sequence
(BLAST)
(BLAST)
001: MVRAPCCGIG VKKGPWSPEE DEALVGYIQR CGHGNWRALP KQAGLSRCGK SCRLRWMNYL RPDIKRGNFS LEEQETIIRL HETFGNRWSS IAASLPGRTD
101: NEIKNVWHTH LKKLVSPNTS SREPKKKKKA GVVSKAQSNS DFSSCGTDSP TVSREISDDA RGSFSSDAFP EIDESFWLDA FSMDDSASSV DLPPVSELSN
201: LLVSSDSDDM DFWLQVFEGV GDLQELSRI
101: NEIKNVWHTH LKKLVSPNTS SREPKKKKKA GVVSKAQSNS DFSSCGTDSP TVSREISDDA RGSFSSDAFP EIDESFWLDA FSMDDSASSV DLPPVSELSN
201: LLVSSDSDDM DFWLQVFEGV GDLQELSRI
001: MGRAPCCEKM GVKRGPWTPE EDQILINYIH LYGHSNWRAL PKHAGLLRCG KSCRLRWINY LRPDIKRGNF TPQEEQTIIN LHESLGNRWS AIAAKLPGRT
101: DNEIKNVWHT HLKKRLSKNL NNGGDTKDVN GINETTNEDK GSVIVDTASL QQFSNSITTF DISNDNKDDI MSYEDISALI DDSFWSDVIS VDNSNKNEKK
201: IEDWEGLIDR NSKKCSYSNS KLYNDDMEFW FDVFTSNRRI EEFSDIPEF
101: DNEIKNVWHT HLKKRLSKNL NNGGDTKDVN GINETTNEDK GSVIVDTASL QQFSNSITTF DISNDNKDDI MSYEDISALI DDSFWSDVIS VDNSNKNEKK
201: IEDWEGLIDR NSKKCSYSNS KLYNDDMEFW FDVFTSNRRI EEFSDIPEF
Arabidopsis Description
MYB14Transcription factor MYB14 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJX8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.