Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400067321 | Potato | nucleus | 81.07 | 80.41 |
| PGSC0003DMT400067318 | Potato | nucleus | 75.72 | 75.72 |
| PGSC0003DMT400067322 | Potato | nucleus | 75.72 | 75.1 |
| GSMUA_Achr4P18180_001 | Banana | nucleus | 30.45 | 50.68 |
| PGSC0003DMT400034263 | Potato | mitochondrion | 17.7 | 50.59 |
| PGSC0003DMT400035748 | Potato | nucleus | 46.5 | 48.92 |
| Solyc07g054980.1.1 | Tomato | nucleus | 88.48 | 45.94 |
| KRH56060 | Soybean | nucleus | 41.98 | 44.35 |
| VIT_12s0134g00480.t01 | Wine grape | nucleus | 46.5 | 43.97 |
| KRH25458 | Soybean | nucleus | 41.56 | 43.16 |
| KRH22481 | Soybean | nucleus | 38.68 | 41.41 |
| PGSC0003DMT400097604 | Potato | nucleus | 34.16 | 39.52 |
| PGSC0003DMT400097096 | Potato | nucleus | 34.16 | 38.97 |
| KRH26874 | Soybean | nucleus | 39.92 | 38.65 |
| KRH56061 | Soybean | nucleus | 38.27 | 38.43 |
| GSMUA_Achr5P14600_001 | Banana | nucleus | 35.39 | 37.55 |
| PGSC0003DMT400060168 | Potato | nucleus | 33.33 | 36.82 |
| GSMUA_Achr4P21910_001 | Banana | nucleus | 32.51 | 36.07 |
| GSMUA_Achr1P09180_001 | Banana | nucleus | 33.74 | 35.65 |
| GSMUA_Achr11P... | Banana | nucleus | 34.16 | 35.32 |
| TraesCS6A01G224400.1 | Wheat | nucleus | 34.57 | 34.85 |
| TraesCS6D01G210500.1 | Wheat | nucleus | 34.16 | 34.58 |
| HORVU6Hr1G058580.1 | Barley | nucleus | 34.57 | 34.57 |
| KRH25461 | Soybean | nucleus | 43.21 | 34.43 |
| TraesCS6B01G257200.1 | Wheat | nucleus | 35.8 | 34.25 |
| TraesCS6D01G210800.1 | Wheat | nucleus | 30.86 | 34.25 |
| TraesCS6B01G257000.1 | Wheat | nucleus | 34.16 | 34.16 |
| PGSC0003DMT400034878 | Potato | nucleus | 35.39 | 34.13 |
| HORVU6Hr1G058640.1 | Barley | nucleus | 34.16 | 34.02 |
| PGSC0003DMT400042007 | Potato | nucleus | 37.45 | 33.96 |
| GSMUA_Achr5P03920_001 | Banana | nucleus | 33.33 | 33.75 |
| PGSC0003DMT400044362 | Potato | nucleus | 37.04 | 33.58 |
| TraesCS6D01G211400.1 | Wheat | nucleus | 34.98 | 33.46 |
| TraesCS6B01G257100.1 | Wheat | nucleus | 34.57 | 33.33 |
| Zm00001d017268_P001 | Maize | nucleus | 33.33 | 33.2 |
| TraesCS6D01G211100.1 | Wheat | nucleus | 34.16 | 33.07 |
| TraesCS6D01G210900.1 | Wheat | nucleus | 32.92 | 33.06 |
| TraesCS6A01G224200.1 | Wheat | nucleus | 34.16 | 32.81 |
| TraesCS6B01G257300.1 | Wheat | nucleus | 34.16 | 32.81 |
| TraesCS6A01G224300.1 | Wheat | nucleus | 33.74 | 32.8 |
| TraesCS6D01G211200.1 | Wheat | nucleus | 32.92 | 32.79 |
| Os02t0624300-01 | Rice | nucleus | 34.57 | 32.56 |
| TraesCS6A01G224000.1 | Wheat | nucleus | 34.16 | 32.42 |
| KRH26875 | Soybean | nucleus | 41.56 | 32.27 |
| EES07173 | Sorghum | nucleus | 34.16 | 32.17 |
| KRH56058 | Soybean | nucleus | 41.98 | 32.08 |
| PGSC0003DMT400029235 | Potato | nucleus | 31.28 | 31.8 |
| KRH56059 | Soybean | nucleus | 42.39 | 31.79 |
| EES12516 | Sorghum | nucleus | 35.39 | 31.62 |
| GSMUA_Achr6P31520_001 | Banana | nucleus | 31.69 | 31.56 |
| TraesCS6A01G224100.1 | Wheat | nucleus | 33.33 | 31.52 |
| PGSC0003DMT400051682 | Potato | nucleus | 33.33 | 31.4 |
| Zm00001d051149_P001 | Maize | nucleus | 32.92 | 30.77 |
| Zm00001d025864_P001 | Maize | nucleus | 34.98 | 30.69 |
| Zm00001d003064_P001 | Maize | nucleus | 36.63 | 30.27 |
| Zm00001d032694_P001 | Maize | nucleus | 33.74 | 30.15 |
| PGSC0003DMT400093355 | Potato | nucleus | 29.63 | 29.88 |
| GSMUA_Achr4P28850_001 | Banana | nucleus | 33.33 | 29.78 |
| TraesCS1A01G155300.1 | Wheat | nucleus | 32.1 | 29.66 |
| PGSC0003DMT400086165 | Potato | nucleus | 34.98 | 29.62 |
| KRH25459 | Soybean | nucleus | 36.63 | 29.57 |
| Zm00001d014029_P001 | Maize | nucleus | 33.33 | 29.14 |
| Os10t0478300-01 | Rice | nucleus | 32.92 | 28.99 |
| HORVU6Hr1G058620.1 | Barley | nucleus | 34.57 | 28.97 |
| HORVU6Hr1G058630.3 | Barley | nucleus, plastid | 34.57 | 28.87 |
| PGSC0003DMT400021498 | Potato | nucleus | 28.4 | 28.75 |
| PGSC0003DMT400051513 | Potato | nucleus | 29.22 | 28.74 |
| PGSC0003DMT400089342 | Potato | nucleus | 28.4 | 28.63 |
| TraesCS1D01G154000.1 | Wheat | nucleus | 30.86 | 28.52 |
| TraesCS1B01G172500.1 | Wheat | nucleus | 30.45 | 28.46 |
| EER91482 | Sorghum | nucleus | 34.57 | 28.38 |
| TraesCS6A01G265300.1 | Wheat | nucleus | 30.45 | 28.24 |
| PGSC0003DMT400070912 | Potato | nucleus | 30.04 | 28.08 |
| PGSC0003DMT400051510 | Potato | nucleus | 27.16 | 27.16 |
| GSMUA_Achr5P03520_001 | Banana | nucleus | 33.33 | 26.73 |
| TraesCS2B01G399200.1 | Wheat | nucleus | 34.16 | 26.27 |
| TraesCS2D01G378400.2 | Wheat | nucleus | 34.16 | 26.27 |
| GSMUA_Achr4P27350_001 | Banana | nucleus | 32.1 | 26.0 |
| GSMUA_Achr2P18090_001 | Banana | nucleus | 31.69 | 25.41 |
| TraesCS2A01G381900.2 | Wheat | nucleus | 34.16 | 25.38 |
| Zm00001d026204_P001 | Maize | nucleus | 34.16 | 25.23 |
| GSMUA_Achr11P... | Banana | nucleus | 29.63 | 25.09 |
| GSMUA_Achr5P18600_001 | Banana | nucleus | 34.16 | 24.92 |
| PGSC0003DMT400021501 | Potato | nucleus | 20.16 | 24.87 |
| TraesCS2D01G444200.1 | Wheat | nucleus | 32.1 | 24.61 |
| PGSC0003DMT400021503 | Potato | nucleus | 19.34 | 24.48 |
| GSMUA_Achr11P... | Banana | nucleus | 30.04 | 24.09 |
| TraesCS6B01G292500.1 | Wheat | nucleus | 31.28 | 22.96 |
| Zm00001d051520_P001 | Maize | nucleus | 32.1 | 22.94 |
| TraesCS6D01G249200.1 | Wheat | nucleus | 31.69 | 22.92 |
| EES12768 | Sorghum | nucleus | 33.74 | 21.81 |
| Os02t0695200-01 | Rice | nucleus | 30.45 | 21.76 |
| Zm00001d026203_P001 | Maize | nucleus | 34.16 | 21.73 |
| TraesCS2D01G444300.1 | Wheat | nucleus | 32.1 | 21.49 |
| TraesCS2B01G466400.1 | Wheat | nucleus | 31.28 | 21.41 |
| Os04t0517100-01 | Rice | nucleus | 15.64 | 21.35 |
| TraesCS2B01G466500.1 | Wheat | nucleus | 31.69 | 21.33 |
| Os04t0594100-01 | Rice | nucleus | 32.1 | 21.02 |
| TraesCS2A01G445500.1 | Wheat | nucleus | 31.69 | 20.98 |
| Zm00001d002476_P001 | Maize | nucleus | 34.16 | 20.49 |
| EES05685 | Sorghum | nucleus | 32.1 | 20.1 |
| HORVU6Hr1G067380.1 | Barley | nucleus | 30.04 | 16.55 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400039029 | EnsemblPlantsGene:PGSC0003DMG400015087 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb | PANTHER:PTHR10641 |
| PANTHER:PTHR10641:SF541 | PFAM:PF00249 | PFscan:PS51294 | PGSC:PGSC0003DMG400015087 | SEG:seg | SMART:SM00717 |
| SUPFAM:SSF46689 | UniParc:UPI000295D709 | UniProt:M1B7P0 | MapMan:15.5.2.1 | : | : |
Description
MYB domain class transcription factor [Source:PGSC_GENE;Acc:PGSC0003DMG400015087]
Coordinates
chr7:+:48070254..48071746
Molecular Weight (calculated)
28244.5 Da
IEP (calculated)
7.322
GRAVY (calculated)
-1.060
Length
243 amino acids
Sequence
(BLAST)
(BLAST)
001: MVRTPGYDEN GRKKGTWTPE EDKKLEAYIT KYGCWNWRQL PNYAEPARCG KSYRLRWMNH LRPNVKRGNY TKEEDELILN LHAQLGNRWS AIAIHLPRRS
101: DNEIKNHWHT TLKKRTDSSS EGSKKCNNKN SGSNIKRKSS VENQNASANN NTHENIVLES SDWSPKESSS EELSSYQHDQ HKLALEEISS GSFWTEPFEV
201: DSFINSKIDF VAPSIDYYGL MCPPSPYIGH EFISSFDFDH YNY
101: DNEIKNHWHT TLKKRTDSSS EGSKKCNNKN SGSNIKRKSS VENQNASANN NTHENIVLES SDWSPKESSS EELSSYQHDQ HKLALEEISS GSFWTEPFEV
201: DSFINSKIDF VAPSIDYYGL MCPPSPYIGH EFISSFDFDH YNY
001: MGRAPCCEKM GLKRGPWTPE EDQILVSFIL NHGHSNWRAL PKQAGLLRCG KSCRLRWMNY LKPDIKRGNF TKEEEDAIIS LHQILGNRWS AIAAKLPGRT
101: DNEIKNVWHT HLKKRLEDYQ PAKPKTSNKK KGTKPKSESV ITSSNSTRSE SELADSSNPS GESLFSTSPS TSEVSSMTLI SHDGYSNEIN MDNKPGDIST
201: IDQECVSFET FGADIDESFW KETLYSQDEH NYVSNDLEVA GLVEIQQEFQ NLGSANNEMI FDSEMDFWFD VLARTGGEQD LLAGL
101: DNEIKNVWHT HLKKRLEDYQ PAKPKTSNKK KGTKPKSESV ITSSNSTRSE SELADSSNPS GESLFSTSPS TSEVSSMTLI SHDGYSNEIN MDNKPGDIST
201: IDQECVSFET FGADIDESFW KETLYSQDEH NYVSNDLEVA GLVEIQQEFQ NLGSANNEMI FDSEMDFWFD VLARTGGEQD LLAGL
Arabidopsis Description
MYB15Transcription factor MYB15 [Source:UniProtKB/Swiss-Prot;Acc:Q9LTC4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.