Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d017268_P001 | Maize | nucleus | 71.71 | 75.82 |
| HORVU6Hr1G058640.1 | Barley | nucleus | 70.54 | 74.59 |
| TraesCS6D01G210500.1 | Wheat | nucleus | 69.38 | 74.58 |
| TraesCS6B01G257000.1 | Wheat | nucleus | 70.16 | 74.49 |
| VIT_05s0049g01010.t01 | Wine grape | nucleus | 41.47 | 74.31 |
| EES07173 | Sorghum | nucleus | 74.03 | 74.03 |
| TraesCS6D01G210900.1 | Wheat | nucleus | 69.38 | 73.97 |
| TraesCS6B01G257300.1 | Wheat | nucleus | 72.48 | 73.91 |
| TraesCS6D01G211100.1 | Wheat | nucleus | 71.71 | 73.71 |
| TraesCS6A01G224400.1 | Wheat | nucleus | 68.6 | 73.44 |
| TraesCS6D01G211200.1 | Wheat | nucleus | 69.38 | 73.36 |
| HORVU6Hr1G058580.1 | Barley | nucleus | 68.6 | 72.84 |
| TraesCS6A01G224300.1 | Wheat | nucleus | 70.54 | 72.8 |
| TraesCS6D01G211400.1 | Wheat | nucleus | 71.32 | 72.44 |
| TraesCS6B01G257100.1 | Wheat | nucleus | 70.54 | 72.22 |
| Zm00001d051149_P001 | Maize | nucleus | 72.09 | 71.54 |
| TraesCS6A01G224000.1 | Wheat | nucleus | 70.93 | 71.48 |
| TraesCS6A01G224100.1 | Wheat | nucleus | 70.93 | 71.21 |
| TraesCS6A01G224200.1 | Wheat | nucleus | 69.38 | 70.75 |
| TraesCS6B01G257200.1 | Wheat | nucleus | 69.38 | 70.47 |
| HORVU6Hr1G058620.1 | Barley | nucleus | 70.16 | 62.41 |
| HORVU6Hr1G058630.3 | Barley | nucleus, plastid | 68.99 | 61.17 |
| TraesCS6D01G210800.1 | Wheat | nucleus | 50.78 | 59.82 |
| PGSC0003DMT400034263 | Potato | mitochondrion | 18.6 | 56.47 |
| AT1G06180.1 | Thale cress | nucleus | 50.39 | 52.85 |
| KRG97042 | Soybean | nucleus | 43.02 | 52.36 |
| KRH68789 | Soybean | nucleus | 42.25 | 52.15 |
| VIT_05s0049g01020.t01 | Wine grape | nucleus | 50.78 | 51.78 |
| PGSC0003DMT400034878 | Potato | nucleus | 50.39 | 51.59 |
| AT2G31180.1 | Thale cress | nucleus | 49.22 | 51.0 |
| Bra021708.1-P | Field mustard | nucleus | 49.22 | 50.8 |
| Solyc05g055030.1.1 | Tomato | nucleus | 42.64 | 50.46 |
| PGSC0003DMT400060168 | Potato | nucleus | 43.02 | 50.45 |
| Bra015481.1-P | Field mustard | nucleus | 49.22 | 50.4 |
| Solyc03g005570.2.1 | Tomato | nucleus | 48.84 | 50.2 |
| Bra022831.1-P | Field mustard | nucleus | 47.67 | 50.0 |
| VIT_07s0005g03340.t01 | Wine grape | nucleus | 51.94 | 49.81 |
| Solyc06g053610.2.1 | Tomato | nucleus | 50.78 | 49.43 |
| PGSC0003DMT400044362 | Potato | nucleus | 51.16 | 49.25 |
| Solyc09g090130.2.1 | Tomato | nucleus | 51.16 | 49.25 |
| KRH34142 | Soybean | nucleus | 39.92 | 49.05 |
| PGSC0003DMT400042007 | Potato | nucleus | 50.78 | 48.88 |
| KRH69121 | Soybean | nucleus | 50.0 | 48.86 |
| KRH56057 | Soybean | nucleus | 30.23 | 48.75 |
| KRH34387 | Soybean | nucleus | 51.94 | 48.73 |
| KRG92419 | Soybean | nucleus | 51.16 | 48.53 |
| KRH31704 | Soybean | nucleus | 48.84 | 47.73 |
| Bra018267.1-P | Field mustard | nucleus | 46.51 | 47.43 |
| Os10t0478300-01 | Rice | nucleus | 50.39 | 47.1 |
| Os04t0517100-01 | Rice | nucleus | 32.17 | 46.63 |
| KRH32183 | Soybean | nucleus | 42.64 | 46.41 |
| KRH67378 | Soybean | nucleus | 52.33 | 45.92 |
| KRG95664 | Soybean | nucleus | 51.55 | 45.7 |
| Solyc06g083900.2.1 | Tomato | nucleus | 44.19 | 44.71 |
| PGSC0003DMT400051682 | Potato | nucleus | 43.8 | 43.8 |
| KRH22481 | Soybean | nucleus | 38.37 | 43.61 |
| KRH25458 | Soybean | nucleus | 38.76 | 42.73 |
| KRH56060 | Soybean | nucleus | 37.21 | 41.74 |
| VIT_12s0134g00480.t01 | Wine grape | nucleus | 40.7 | 40.86 |
| KRH56061 | Soybean | nucleus | 37.98 | 40.5 |
| PGSC0003DMT400097096 | Potato | nucleus | 32.17 | 38.97 |
| Solyc12g005640.1.1 | Tomato | nucleus | 34.5 | 38.2 |
| PGSC0003DMT400035748 | Potato | nucleus | 34.11 | 38.1 |
| Solyc07g054960.1.1 | Tomato | nucleus | 31.4 | 37.5 |
| PGSC0003DMT400097604 | Potato | nucleus | 30.23 | 37.14 |
| PGSC0003DMT400067321 | Potato | nucleus | 34.88 | 36.73 |
| PGSC0003DMT400067318 | Potato | nucleus | 34.11 | 36.21 |
| PGSC0003DMT400067322 | Potato | nucleus | 34.11 | 35.92 |
| KRH25468 | Soybean | nucleus | 32.56 | 35.9 |
| Solyc07g053230.2.1 | Tomato | nucleus | 34.88 | 35.86 |
| PGSC0003DMT400093355 | Potato | nucleus | 33.33 | 35.68 |
| KRH56056 | Soybean | nucleus | 32.17 | 35.32 |
| VIT_00s0203g00170.t01 | Wine grape | nucleus | 36.05 | 34.7 |
| KRH26874 | Soybean | nucleus | 33.72 | 34.66 |
| PGSC0003DMT400039029 | Potato | nucleus | 32.56 | 34.57 |
| Solyc07g053240.2.1 | Tomato | nucleus | 33.33 | 34.54 |
| VIT_12s0134g00490.t01 | Wine grape | nucleus | 33.72 | 34.52 |
| Solyc07g055000.1.1 | Tomato | nucleus | 32.17 | 34.3 |
| Solyc06g033870.1.1 | Tomato | nucleus | 32.56 | 34.01 |
| Os02t0695200-01 | Rice | nucleus | 44.19 | 33.53 |
| Solyc03g093940.1.1 | Tomato | nucleus | 27.52 | 32.72 |
| Solyc06g034000.1.1 | Tomato | nucleus | 29.84 | 32.63 |
| Solyc03g093930.2.1 | Tomato | nucleus | 30.62 | 32.24 |
| PGSC0003DMT400051513 | Potato | nucleus | 29.84 | 31.17 |
| KRH25461 | Soybean | nucleus | 36.82 | 31.15 |
| KRH56058 | Soybean | nucleus | 38.37 | 31.13 |
| KRH26875 | Soybean | nucleus | 37.21 | 30.67 |
| PGSC0003DMT400051510 | Potato | nucleus | 28.68 | 30.45 |
| Solyc03g093890.2.1 | Tomato | nucleus | 29.46 | 30.04 |
| PGSC0003DMT400070912 | Potato | nucleus | 30.23 | 30.0 |
| Os04t0594100-01 | Rice | nucleus | 43.02 | 29.92 |
| KRH56059 | Soybean | nucleus | 36.82 | 29.32 |
| PGSC0003DMT400021498 | Potato | nucleus | 27.13 | 29.17 |
| PGSC0003DMT400086165 | Potato | nucleus | 32.17 | 28.92 |
| KRH25459 | Soybean | nucleus | 33.33 | 28.57 |
| PGSC0003DMT400021503 | Potato | nucleus | 17.83 | 23.96 |
| PGSC0003DMT400021501 | Potato | nucleus | 18.22 | 23.86 |
| Solyc07g054980.1.1 | Tomato | nucleus | 35.27 | 19.44 |
| CDX73801 | Canola | nucleus | 1.55 | 5.97 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | EntrezGene:4330027 | EMBL:AK112056 | ProteinID:BAD23776.1 | ProteinID:BAF09388.1 |
| ProteinID:BAS79847.1 | ProteinID:EAZ23866.1 | GO:GO:0000981 | GO:GO:0001135 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0006357 | GO:GO:0006950 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009409 | GO:GO:0009628 | GO:GO:0009987 |
| GO:GO:0030154 | GO:GO:0043565 | GO:GO:0044212 | GO:GO:0045893 | InterPro:Homeobox-like_sf | InterPro:IPR017930 |
| InterPro:Myb_dom | EnsemblPlantsGene:Os02g0624300 | EnsemblPlants:Os02t0624300-01 | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 |
| PANTHER:PTHR10641:SF695 | UniProt:Q6K1S6 | InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI00003B074E |
| RefSeq:XP_015623124.1 | SEG:seg | : | : | : | : |
Description
Myb transcription factor 4 paralog, OsMyb4 paralogR2R3-type MYB transcription factor, Negative regulation of cold tolerance (Os02t0624300-01)
Coordinates
chr2:-:24878777..24879932
Molecular Weight (calculated)
28470.3 Da
IEP (calculated)
6.312
GRAVY (calculated)
-0.618
Length
258 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRAPCCEKM GLKRGPWTAE EDRILVAHIE RHGHSNWRAL PRQAGLLRCG KSCRLRWINY LRPDIKRGNF TREEEDAIIH LHDLLGNRWS AIAARLPGRT
101: DNEIKNVWHT HLKKRLEPKP SSGREAAAPK RKATKKAAAV AVAIDVPTTV PVSPEQSLST TTTSAATTEE YSYSMASSAD HNTTDSFTSE EEFQIDDSFW
201: SETLAMTVDS TDSGMEMSGG DPLGAGGASP SSSNDDDMDD FWLKLFIQAG GMQNLPQI
101: DNEIKNVWHT HLKKRLEPKP SSGREAAAPK RKATKKAAAV AVAIDVPTTV PVSPEQSLST TTTSAATTEE YSYSMASSAD HNTTDSFTSE EEFQIDDSFW
201: SETLAMTVDS TDSGMEMSGG DPLGAGGASP SSSNDDDMDD FWLKLFIQAG GMQNLPQI
001: MGRAPCCEKM GLKRGPWTPE EDQILVSFIL NHGHSNWRAL PKQAGLLRCG KSCRLRWMNY LKPDIKRGNF TKEEEDAIIS LHQILGNRWS AIAAKLPGRT
101: DNEIKNVWHT HLKKRLEDYQ PAKPKTSNKK KGTKPKSESV ITSSNSTRSE SELADSSNPS GESLFSTSPS TSEVSSMTLI SHDGYSNEIN MDNKPGDIST
201: IDQECVSFET FGADIDESFW KETLYSQDEH NYVSNDLEVA GLVEIQQEFQ NLGSANNEMI FDSEMDFWFD VLARTGGEQD LLAGL
101: DNEIKNVWHT HLKKRLEDYQ PAKPKTSNKK KGTKPKSESV ITSSNSTRSE SELADSSNPS GESLFSTSPS TSEVSSMTLI SHDGYSNEIN MDNKPGDIST
201: IDQECVSFET FGADIDESFW KETLYSQDEH NYVSNDLEVA GLVEIQQEFQ NLGSANNEMI FDSEMDFWFD VLARTGGEQD LLAGL
Arabidopsis Description
MYB15Transcription factor MYB15 [Source:UniProtKB/Swiss-Prot;Acc:Q9LTC4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.