Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr4P18180_001 | Banana | nucleus | 38.4 | 62.33 |
| Zm00001d017268_P001 | Maize | nucleus | 49.37 | 47.95 |
| CDY15424 | Canola | nucleus | 43.46 | 46.61 |
| HORVU6Hr1G058640.1 | Barley | nucleus | 45.99 | 44.67 |
| EES07173 | Sorghum | nucleus | 48.52 | 44.57 |
| PGSC0003DMT400034878 | Potato | nucleus | 46.84 | 44.05 |
| TraesCS6B01G257000.1 | Wheat | nucleus | 45.15 | 44.03 |
| AT1G06180.1 | Thale cress | nucleus | 45.57 | 43.9 |
| GSMUA_Achr4P21910_001 | Banana | nucleus | 40.51 | 43.84 |
| TraesCS6D01G211100.1 | Wheat | nucleus | 46.41 | 43.82 |
| KRH34142 | Soybean | nucleus | 38.82 | 43.81 |
| TraesCS6D01G210900.1 | Wheat | nucleus | 44.73 | 43.8 |
| TraesCS6D01G210500.1 | Wheat | nucleus | 44.3 | 43.75 |
| KRG95664 | Soybean | nucleus | 53.59 | 43.64 |
| TraesCS6A01G224400.1 | Wheat | nucleus | 44.3 | 43.57 |
| KRH68789 | Soybean | nucleus | 38.4 | 43.54 |
| KRH67378 | Soybean | nucleus | 54.01 | 43.54 |
| GSMUA_Achr1P09180_001 | Banana | nucleus | 42.19 | 43.48 |
| TraesCS6A01G224200.1 | Wheat | nucleus | 46.41 | 43.48 |
| TraesCS6B01G257300.1 | Wheat | nucleus | 46.41 | 43.48 |
| Zm00001d051149_P001 | Maize | nucleus | 47.68 | 43.46 |
| TraesCS6D01G211200.1 | Wheat | nucleus | 44.73 | 43.44 |
| TraesCS6B01G257100.1 | Wheat | nucleus | 45.99 | 43.25 |
| HORVU6Hr1G058580.1 | Barley | nucleus | 44.3 | 43.21 |
| KRH56057 | Soybean | nucleus | 29.11 | 43.12 |
| TraesCS6D01G210800.1 | Wheat | nucleus | 39.66 | 42.92 |
| CDY10182 | Canola | nucleus | 45.15 | 42.8 |
| TraesCS6A01G224300.1 | Wheat | nucleus | 45.15 | 42.8 |
| EES12516 | Sorghum | nucleus | 48.95 | 42.65 |
| Solyc06g053610.2.1 | Tomato | nucleus | 47.68 | 42.64 |
| Os02t0624300-01 | Rice | nucleus | 46.41 | 42.64 |
| AT2G31180.1 | Thale cress | nucleus | 44.73 | 42.57 |
| PGSC0003DMT400042007 | Potato | nucleus | 48.1 | 42.54 |
| TraesCS6D01G211400.1 | Wheat | nucleus | 45.57 | 42.52 |
| GSMUA_Achr5P03920_001 | Banana | nucleus | 43.04 | 42.5 |
| Bra015481.1-P | Field mustard | nucleus | 45.15 | 42.46 |
| CDY47723 | Canola | nucleus | 45.15 | 42.46 |
| TraesCS6A01G224100.1 | Wheat | nucleus | 45.99 | 42.41 |
| Bra021708.1-P | Field mustard | nucleus | 44.73 | 42.4 |
| CDY57089 | Canola | nucleus | 44.73 | 42.4 |
| CDX84795 | Canola | nucleus | 43.88 | 42.28 |
| CDY23952 | Canola | nucleus | 43.88 | 42.28 |
| TraesCS6B01G257200.1 | Wheat | nucleus | 45.15 | 42.13 |
| KRG97042 | Soybean | nucleus | 37.55 | 41.98 |
| Zm00001d025864_P001 | Maize | nucleus | 48.95 | 41.88 |
| Bra022831.1-P | Field mustard | nucleus | 43.46 | 41.87 |
| Solyc03g005570.2.1 | Tomato | nucleus | 44.3 | 41.83 |
| Solyc09g090130.2.1 | Tomato | nucleus | 47.26 | 41.79 |
| KRH31704 | Soybean | nucleus | 46.41 | 41.67 |
| VIT_07s0005g03340.t01 | Wine grape | nucleus | 47.26 | 41.64 |
| PGSC0003DMT400044362 | Potato | nucleus | 46.84 | 41.42 |
| TraesCS6A01G224000.1 | Wheat | nucleus | 44.73 | 41.41 |
| Bra018267.1-P | Field mustard | nucleus | 43.88 | 41.11 |
| CDY70982 | Canola | nucleus | 43.88 | 41.11 |
| KRH69121 | Soybean | nucleus | 45.57 | 40.91 |
| GSMUA_Achr5P14600_001 | Banana | nucleus | 39.24 | 40.61 |
| GSMUA_Achr11P... | Banana | nucleus | 39.66 | 40.0 |
| Zm00001d003064_P001 | Maize | nucleus | 49.37 | 39.8 |
| KRG92419 | Soybean | nucleus | 44.73 | 38.97 |
| KRH34387 | Soybean | nucleus | 44.73 | 38.55 |
| KRH22481 | Soybean | nucleus | 36.71 | 38.33 |
| TraesCS1A01G155300.1 | Wheat | nucleus | 41.35 | 37.26 |
| HORVU6Hr1G058630.3 | Barley | nucleus, plastid | 45.57 | 37.11 |
| HORVU6Hr1G058620.1 | Barley | nucleus | 45.15 | 36.9 |
| TraesCS1D01G154000.1 | Wheat | nucleus | 40.08 | 36.12 |
| TraesCS2B01G399200.1 | Wheat | nucleus | 48.1 | 36.08 |
| TraesCS2D01G378400.2 | Wheat | nucleus | 48.1 | 36.08 |
| KRH56060 | Soybean | nucleus | 34.6 | 35.65 |
| TraesCS6A01G265300.1 | Wheat | nucleus | 39.24 | 35.5 |
| TraesCS1B01G172500.1 | Wheat | nucleus | 38.82 | 35.38 |
| Os10t0478300-01 | Rice | nucleus | 40.93 | 35.14 |
| KRH25458 | Soybean | nucleus | 34.6 | 35.04 |
| TraesCS2A01G381900.2 | Wheat | nucleus | 48.1 | 34.86 |
| GSMUA_Achr6P31520_001 | Banana | nucleus | 35.87 | 34.84 |
| Zm00001d032694_P001 | Maize | nucleus | 39.66 | 34.56 |
| Zm00001d014029_P001 | Maize | nucleus | 40.08 | 34.17 |
| KRH56061 | Soybean | nucleus | 34.18 | 33.47 |
| GSMUA_Achr4P28850_001 | Banana | nucleus | 37.97 | 33.09 |
| GSMUA_Achr11P... | Banana | nucleus | 41.77 | 32.67 |
| GSMUA_Achr2P18090_001 | Banana | nucleus | 41.35 | 32.34 |
| EER91482 | Sorghum | nucleus | 40.08 | 32.09 |
| KRH56056 | Soybean | nucleus | 31.65 | 31.91 |
| KRH26874 | Soybean | nucleus | 33.76 | 31.87 |
| KRH25468 | Soybean | nucleus | 31.22 | 31.62 |
| GSMUA_Achr11P... | Banana | nucleus | 37.97 | 31.36 |
| GSMUA_Achr5P03520_001 | Banana | nucleus | 39.24 | 30.69 |
| TraesCS2D01G444200.1 | Wheat | nucleus | 39.66 | 29.65 |
| GSMUA_Achr4P27350_001 | Banana | nucleus | 37.13 | 29.33 |
| Zm00001d026204_P001 | Maize | nucleus | 40.51 | 29.18 |
| TraesCS6B01G292500.1 | Wheat | nucleus | 40.51 | 29.0 |
| TraesCS6D01G249200.1 | Wheat | nucleus | 40.08 | 28.27 |
| Zm00001d051520_P001 | Maize | nucleus | 40.08 | 27.94 |
| Os02t0695200-01 | Rice | nucleus | 39.66 | 27.65 |
| GSMUA_Achr5P18600_001 | Banana | nucleus | 38.82 | 27.63 |
| KRH25461 | Soybean | nucleus | 35.02 | 27.21 |
| Os04t0517100-01 | Rice | nucleus | 20.25 | 26.97 |
| TraesCS2B01G466400.1 | Wheat | nucleus | 40.08 | 26.76 |
| KRH56058 | Soybean | nucleus | 35.44 | 26.42 |
| TraesCS2B01G466500.1 | Wheat | nucleus | 40.08 | 26.32 |
| KRH56059 | Soybean | nucleus | 35.87 | 26.23 |
| TraesCS2D01G444300.1 | Wheat | nucleus | 40.08 | 26.17 |
| KRH13720 | Soybean | nucleus | 37.97 | 26.09 |
| EES12768 | Sorghum | nucleus | 41.35 | 26.06 |
| Os04t0594100-01 | Rice | nucleus | 40.51 | 25.88 |
| TraesCS2A01G445500.1 | Wheat | nucleus | 39.66 | 25.61 |
| KRH26875 | Soybean | nucleus | 33.76 | 25.56 |
| Zm00001d026203_P001 | Maize | nucleus | 40.93 | 25.39 |
| KRH43737 | Soybean | nucleus | 40.93 | 25.13 |
| KRH25459 | Soybean | nucleus | 31.65 | 24.92 |
| EES05685 | Sorghum | nucleus | 40.51 | 24.74 |
| Zm00001d002476_P001 | Maize | nucleus | 41.35 | 24.2 |
| HORVU6Hr1G067380.1 | Barley | nucleus | 41.35 | 22.22 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | UniProt:A0A0R0HNZ4 | EMBL:ACUP02006104 | EnsemblPlantsGene:GLYMA_10G037000 | GO:GO:0000003 |
| GO:GO:0000981 | GO:GO:0001135 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006357 | GO:GO:0006950 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009628 | GO:GO:0009651 | GO:GO:0009719 | GO:GO:0009739 | GO:GO:0009751 | GO:GO:0009753 |
| GO:GO:0009791 | GO:GO:0009908 | GO:GO:0009909 | GO:GO:0009987 | GO:GO:0030154 | GO:GO:0043565 |
| GO:GO:0044212 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | EnsemblPlants:KRH32183 | ProteinID:KRH32183 | ProteinID:KRH32183.1 |
| InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF695 | InterPro:SANT/Myb |
| SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0006EDF500 | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr10:+:3246634..3249553
Molecular Weight (calculated)
26660.2 Da
IEP (calculated)
7.054
GRAVY (calculated)
-0.756
Length
237 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRAPCCEKM GLKKGLWTQE EDLILIHHIN THGHKNWRAL PKQAGLLRCG KSCRLRWINY LKPDIKRGNF TREEEDMVIQ LHETLGNRWS AIAAKFPGRT
101: DNEIKNQKLS SLDTLNSKQQ PVNLPTEEKK PLSPPQCVSS SMSTLTTSSD TTTNEHNSNH HHVPMMNNST TAPESLDDDF WSQVLSADNN NSDATTSFPA
201: TGAAADGKFQ GVHPSSVYNN VDYWFDVYMG AQEFPKF
101: DNEIKNQKLS SLDTLNSKQQ PVNLPTEEKK PLSPPQCVSS SMSTLTTSSD TTTNEHNSNH HHVPMMNNST TAPESLDDDF WSQVLSADNN NSDATTSFPA
201: TGAAADGKFQ GVHPSSVYNN VDYWFDVYMG AQEFPKF
001: MGRRPCCEKI GLKKGPWSAE EDRILINYIS LHGHPNWRAL PKLAGLLRCG KSCRLRWINY LRPDIKRGNF TPHEEDTIIS LHQLLGNRWS AIAAKLPGRT
101: DNEIKNVWHT HLKKRLHHSQ DQNNKEDFVS TTAAEMPTSP QQQSSSSADI SAITTLGNNN DISNSNKDSA TSSEDVLAII DESFWSEVVL MDCDISGNEK
201: NEKKIENWEG SLDRNDKGYN HDMEFWFDHL TSSSCIIGEM SDISEF
101: DNEIKNVWHT HLKKRLHHSQ DQNNKEDFVS TTAAEMPTSP QQQSSSSADI SAITTLGNNN DISNSNKDSA TSSEDVLAII DESFWSEVVL MDCDISGNEK
201: NEKKIENWEG SLDRNDKGYN HDMEFWFDHL TSSSCIIGEM SDISEF
Arabidopsis Description
ATMYB13Transcription factor MYB13 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNC9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.