Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- mitochondrion 4
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES05685 | Sorghum | nucleus | 84.41 | 73.97 |
| TraesCS6A01G265300.1 | Wheat | nucleus | 49.41 | 64.12 |
| Os02t0695200-01 | Rice | nucleus | 63.82 | 63.82 |
| VIT_05s0049g01010.t01 | Wine grape | nucleus | 26.18 | 61.81 |
| TraesCS6B01G292500.1 | Wheat | nucleus | 58.82 | 60.42 |
| TraesCS6D01G249200.1 | Wheat | nucleus | 59.12 | 59.82 |
| PGSC0003DMT400034263 | Potato | mitochondrion | 13.24 | 52.94 |
| GSMUA_Achr2P18090_001 | Banana | nucleus | 46.76 | 52.48 |
| Zm00001d026204_P001 | Maize | nucleus | 50.59 | 52.28 |
| GSMUA_Achr11P... | Banana | nucleus | 42.35 | 50.17 |
| Zm00001d026203_P001 | Maize | nucleus | 55.29 | 49.21 |
| GSMUA_Achr4P28850_001 | Banana | nucleus | 39.12 | 48.9 |
| GSMUA_Achr5P03520_001 | Banana | nucleus | 43.53 | 48.84 |
| GSMUA_Achr6P31520_001 | Banana | nucleus | 34.71 | 48.36 |
| Zm00001d002476_P001 | Maize | nucleus | 56.76 | 47.65 |
| KRH56057 | Soybean | nucleus | 22.06 | 46.88 |
| Zm00001d017268_P001 | Maize | nucleus | 33.24 | 46.31 |
| GSMUA_Achr4P27350_001 | Banana | nucleus | 40.29 | 45.67 |
| HORVU6Hr1G067380.1 | Barley | nucleus | 59.12 | 45.58 |
| Zm00001d051149_P001 | Maize | nucleus | 33.53 | 43.85 |
| Solyc05g055030.1.1 | Tomato | nucleus | 27.94 | 43.58 |
| KRH34142 | Soybean | nucleus | 26.76 | 43.33 |
| PGSC0003DMT400060168 | Potato | nucleus | 27.65 | 42.73 |
| VIT_05s0049g01020.t01 | Wine grape | nucleus | 31.76 | 42.69 |
| KRG97042 | Soybean | nucleus | 26.47 | 42.45 |
| KRH68789 | Soybean | nucleus | 25.88 | 42.11 |
| AT1G06180.1 | Thale cress | nucleus | 30.0 | 41.46 |
| KRH22481 | Soybean | nucleus | 27.35 | 40.97 |
| KRH31704 | Soybean | nucleus | 31.76 | 40.91 |
| KRH69121 | Soybean | nucleus | 31.76 | 40.91 |
| VIT_07s0005g03340.t01 | Wine grape | nucleus | 32.35 | 40.89 |
| Bra021708.1-P | Field mustard | nucleus | 30.0 | 40.8 |
| Solyc06g083900.2.1 | Tomato | nucleus | 30.59 | 40.78 |
| Zm00001d025864_P001 | Maize | nucleus | 32.94 | 40.43 |
| Solyc06g053610.2.1 | Tomato | nucleus | 31.47 | 40.38 |
| KRH32183 | Soybean | nucleus | 27.94 | 40.08 |
| PGSC0003DMT400034878 | Potato | nucleus | 29.71 | 40.08 |
| PGSC0003DMT400044362 | Potato | nucleus | 31.47 | 39.93 |
| PGSC0003DMT400051682 | Potato | nucleus | 30.29 | 39.92 |
| AT2G31180.1 | Thale cress | nucleus | 29.12 | 39.76 |
| Bra015481.1-P | Field mustard | nucleus | 29.41 | 39.68 |
| PGSC0003DMT400042007 | Potato | nucleus | 31.18 | 39.55 |
| Solyc09g090130.2.1 | Tomato | nucleus | 31.18 | 39.55 |
| Zm00001d032694_P001 | Maize | nucleus | 31.47 | 39.34 |
| KRG92419 | Soybean | nucleus | 31.47 | 39.34 |
| Bra018267.1-P | Field mustard | nucleus | 29.12 | 39.13 |
| Solyc03g005570.2.1 | Tomato | nucleus | 28.82 | 39.04 |
| Bra022831.1-P | Field mustard | nucleus | 28.24 | 39.02 |
| KRG95664 | Soybean | nucleus | 33.24 | 38.83 |
| KRH67378 | Soybean | nucleus | 33.53 | 38.78 |
| KRH34387 | Soybean | nucleus | 31.18 | 38.55 |
| Zm00001d003064_P001 | Maize | nucleus | 32.94 | 38.1 |
| VIT_12s0134g00480.t01 | Wine grape | nucleus | 28.24 | 37.35 |
| Zm00001d014029_P001 | Maize | nucleus | 30.29 | 37.05 |
| Solyc07g054960.1.1 | Tomato | nucleus | 23.53 | 37.04 |
| KRH56060 | Soybean | nucleus | 24.71 | 36.52 |
| PGSC0003DMT400067318 | Potato | nucleus | 25.88 | 36.21 |
| KRH56061 | Soybean | nucleus | 25.59 | 35.95 |
| PGSC0003DMT400035748 | Potato | nucleus | 24.41 | 35.93 |
| KRH25458 | Soybean | nucleus | 24.71 | 35.9 |
| Solyc07g053230.2.1 | Tomato | nucleus | 26.47 | 35.86 |
| PGSC0003DMT400067321 | Potato | nucleus | 25.59 | 35.51 |
| KRH56056 | Soybean | nucleus | 24.41 | 35.32 |
| Solyc12g005640.1.1 | Tomato | nucleus | 24.12 | 35.19 |
| PGSC0003DMT400097604 | Potato | nucleus | 21.47 | 34.76 |
| PGSC0003DMT400097096 | Potato | nucleus | 21.76 | 34.74 |
| Solyc07g055000.1.1 | Tomato | nucleus | 24.71 | 34.71 |
| KRH25468 | Soybean | nucleus | 23.82 | 34.62 |
| Solyc07g053240.2.1 | Tomato | nucleus | 25.29 | 34.54 |
| PGSC0003DMT400067322 | Potato | nucleus | 24.71 | 34.29 |
| VIT_12s0134g00490.t01 | Wine grape | nucleus | 25.29 | 34.13 |
| Solyc06g034000.1.1 | Tomato | nucleus | 23.53 | 33.9 |
| Solyc06g033870.1.1 | Tomato | nucleus | 24.12 | 33.2 |
| PGSC0003DMT400051513 | Potato | nucleus | 23.82 | 32.79 |
| PGSC0003DMT400093355 | Potato | nucleus | 23.24 | 32.78 |
| KRH26874 | Soybean | nucleus | 24.12 | 32.67 |
| PGSC0003DMT400051510 | Potato | nucleus | 23.24 | 32.51 |
| Solyc03g093940.1.1 | Tomato | nucleus | 20.59 | 32.26 |
| KRH25461 | Soybean | nucleus | 28.82 | 32.13 |
| PGSC0003DMT400039029 | Potato | nucleus | 22.94 | 32.1 |
| PGSC0003DMT400070912 | Potato | nucleus | 24.41 | 31.92 |
| Solyc03g093930.2.1 | Tomato | nucleus | 22.94 | 31.84 |
| KRH56058 | Soybean | nucleus | 29.41 | 31.45 |
| VIT_00s0203g00170.t01 | Wine grape | nucleus | 24.71 | 31.34 |
| KRH56059 | Soybean | nucleus | 29.71 | 31.17 |
| KRH26875 | Soybean | nucleus | 28.24 | 30.67 |
| KRH25459 | Soybean | nucleus | 27.06 | 30.56 |
| Solyc03g093890.2.1 | Tomato | nucleus | 22.35 | 30.04 |
| PGSC0003DMT400021498 | Potato | nucleus | 20.88 | 29.58 |
| PGSC0003DMT400086165 | Potato | nucleus | 22.94 | 27.18 |
| PGSC0003DMT400021503 | Potato | nucleus | 13.53 | 23.96 |
| PGSC0003DMT400021501 | Potato | nucleus | 13.82 | 23.86 |
| Solyc07g054980.1.1 | Tomato | nucleus | 27.35 | 19.87 |
| CDX73801 | Canola | nucleus | 2.35 | 11.94 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | ProteinID:AQK54436.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:Homeobox-like_sf | InterPro:IPR017930 | UniProt:K7U386 | InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF596 | InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0001E24B4F |
| EnsemblPlantsGene:Zm00001d051520 | EnsemblPlants:Zm00001d051520_P001 | EnsemblPlants:Zm00001d051520_T001 | SEG:seg | : | : |
Description
MYB-transcription factor 19Myb-related protein Zm1
Coordinates
chr4:-:161213576..161215329
Molecular Weight (calculated)
36253.4 Da
IEP (calculated)
4.598
GRAVY (calculated)
-0.399
Length
340 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRGRAPCCA KVGLNRGSWT PQEDMRLIAY IQKHGHTNWR ALPKQAGLLR CGKSCRLRWI NYLRPDLKRG NFTDEEEEAI IRLHGLLGNK WSKIAACLPG
101: RTDNEIKNVW NTHLKKKVAQ REKKKAGAGS GDAGTPATAP LSSATSSTTT HNSSGGSDSG DQCGTSREPD ATDVCPLQLE DMDVSDMLVD GAPPAAQPMP
201: SPSSSSSLTT CVGGVEELIE LPVIDIEPEI WSIIDGESAV ARHGGDAAAP CTGTGTAVST SEAEEAAAND WWLENLEKEL GLWGYAEEDT QAHPDLLDHY
301: TGLSPLCALE GDPVSTYFQT GPAAAEPELL VVVEPSAVLL
101: RTDNEIKNVW NTHLKKKVAQ REKKKAGAGS GDAGTPATAP LSSATSSTTT HNSSGGSDSG DQCGTSREPD ATDVCPLQLE DMDVSDMLVD GAPPAAQPMP
201: SPSSSSSLTT CVGGVEELIE LPVIDIEPEI WSIIDGESAV ARHGGDAAAP CTGTGTAVST SEAEEAAAND WWLENLEKEL GLWGYAEEDT QAHPDLLDHY
301: TGLSPLCALE GDPVSTYFQT GPAAAEPELL VVVEPSAVLL
001: MGKGRAPCCD KTKVKRGPWS PEEDIKLISF IQKFGHENWR SLPKQSGLLR CGKSCRLRWI NYLRPDLKRG NFTSEEEETI IKLHHNYGNK WSKIASQLPG
101: RTDNEIKNVW HTHLKKRLAQ SSGTADEPAS PCSSDSVSRG KDDKSSHVED SLNRETNHRN ELSTSMSSGG SNQQDDPKID ELRFEYIEEA YSEFNDIIIQ
201: EVDKPDLLEI PFDSDPDIWS FLDTSNSFQQ STANENSSGS RATTEEESDE DEVKKWFKHL ESELGLEEDD NQQQYKEEES SSSSLLKNYE LMIH
101: RTDNEIKNVW HTHLKKRLAQ SSGTADEPAS PCSSDSVSRG KDDKSSHVED SLNRETNHRN ELSTSMSSGG SNQQDDPKID ELRFEYIEEA YSEFNDIIIQ
201: EVDKPDLLEI PFDSDPDIWS FLDTSNSFQQ STANENSSGS RATTEEESDE DEVKKWFKHL ESELGLEEDD NQQQYKEEES SSSSLLKNYE LMIH
Arabidopsis Description
ATMYB63myb domain protein 63 [Source:TAIR;Acc:AT1G79180]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.