Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc06g083900.2.1 | Tomato | nucleus | 89.92 | 90.98 |
| GSMUA_Achr4P18180_001 | Banana | nucleus | 35.66 | 63.01 |
| PGSC0003DMT400034263 | Potato | mitochondrion | 18.22 | 55.29 |
| CDY15424 | Canola | nucleus | 43.02 | 50.23 |
| AT1G06180.1 | Thale cress | nucleus | 47.29 | 49.59 |
| TraesCS6D01G210800.1 | Wheat | nucleus | 41.09 | 48.4 |
| GSMUA_Achr11P... | Banana | nucleus | 43.8 | 48.09 |
| Bra021708.1-P | Field mustard | nucleus | 46.12 | 47.6 |
| CDY57089 | Canola | nucleus | 46.12 | 47.6 |
| GSMUA_Achr1P09180_001 | Banana | nucleus | 42.25 | 47.39 |
| PGSC0003DMT400060168 | Potato | nucleus | 40.31 | 47.27 |
| CDX84795 | Canola | nucleus | 44.96 | 47.15 |
| TraesCS6D01G210500.1 | Wheat | nucleus | 43.8 | 47.08 |
| TraesCS6B01G257000.1 | Wheat | nucleus | 44.19 | 46.91 |
| CDY10182 | Canola | nucleus | 45.35 | 46.8 |
| Bra022831.1-P | Field mustard | nucleus | 44.57 | 46.75 |
| CDY23952 | Canola | nucleus | 44.57 | 46.75 |
| HORVU6Hr1G058640.1 | Barley | nucleus | 44.19 | 46.72 |
| Bra015481.1-P | Field mustard | nucleus | 45.35 | 46.43 |
| CDY47723 | Canola | nucleus | 45.35 | 46.43 |
| PGSC0003DMT400034878 | Potato | nucleus | 45.35 | 46.43 |
| PGSC0003DMT400042007 | Potato | nucleus | 48.06 | 46.27 |
| GSMUA_Achr4P21910_001 | Banana | nucleus | 39.15 | 46.12 |
| HORVU6Hr1G058580.1 | Barley | nucleus | 43.41 | 46.09 |
| TraesCS6A01G224400.1 | Wheat | nucleus | 43.02 | 46.06 |
| TraesCS6D01G211200.1 | Wheat | nucleus | 43.41 | 45.9 |
| TraesCS6D01G210900.1 | Wheat | nucleus | 43.02 | 45.87 |
| Zm00001d017268_P001 | Maize | nucleus | 43.02 | 45.49 |
| TraesCS6D01G211100.1 | Wheat | nucleus | 44.19 | 45.42 |
| TraesCS6B01G257100.1 | Wheat | nucleus | 44.19 | 45.24 |
| TraesCS6B01G257300.1 | Wheat | nucleus | 44.19 | 45.06 |
| AT2G31180.1 | Thale cress | nucleus | 43.41 | 44.98 |
| GSMUA_Achr5P14600_001 | Banana | nucleus | 39.92 | 44.98 |
| EES07173 | Sorghum | nucleus | 44.96 | 44.96 |
| TraesCS6B01G257200.1 | Wheat | nucleus | 44.19 | 44.88 |
| TraesCS6D01G211400.1 | Wheat | nucleus | 44.19 | 44.88 |
| TraesCS6A01G224100.1 | Wheat | nucleus | 44.19 | 44.36 |
| Bra018267.1-P | Field mustard | nucleus | 43.41 | 44.27 |
| CDY70982 | Canola | nucleus | 43.41 | 44.27 |
| Zm00001d051149_P001 | Maize | nucleus | 44.57 | 44.23 |
| TraesCS6A01G224000.1 | Wheat | nucleus | 43.8 | 44.14 |
| PGSC0003DMT400044362 | Potato | nucleus | 45.74 | 44.03 |
| TraesCS6A01G224200.1 | Wheat | nucleus | 43.02 | 43.87 |
| Os02t0624300-01 | Rice | nucleus | 43.8 | 43.8 |
| TraesCS6A01G224300.1 | Wheat | nucleus | 42.25 | 43.6 |
| GSMUA_Achr5P03920_001 | Banana | nucleus | 40.31 | 43.33 |
| TraesCS1A01G155300.1 | Wheat | nucleus | 42.64 | 41.83 |
| TraesCS1B01G172500.1 | Wheat | nucleus | 41.47 | 41.15 |
| EES12516 | Sorghum | nucleus | 43.02 | 40.81 |
| HORVU6Hr1G058620.1 | Barley | nucleus | 44.96 | 40.0 |
| TraesCS1D01G154000.1 | Wheat | nucleus | 40.7 | 39.92 |
| GSMUA_Achr4P28850_001 | Banana | nucleus | 41.86 | 39.71 |
| TraesCS6A01G265300.1 | Wheat | nucleus | 40.31 | 39.69 |
| PGSC0003DMT400089342 | Potato | nucleus | 36.82 | 39.42 |
| Zm00001d025864_P001 | Maize | nucleus | 42.25 | 39.35 |
| Zm00001d032694_P001 | Maize | nucleus | 41.47 | 39.34 |
| Zm00001d014029_P001 | Maize | nucleus | 41.47 | 38.49 |
| Os10t0478300-01 | Rice | nucleus | 41.09 | 38.41 |
| HORVU6Hr1G058630.3 | Barley | nucleus, plastid | 43.02 | 38.14 |
| PGSC0003DMT400029235 | Potato | nucleus | 35.27 | 38.08 |
| EER91482 | Sorghum | nucleus | 43.41 | 37.84 |
| Zm00001d003064_P001 | Maize | nucleus | 43.02 | 37.76 |
| PGSC0003DMT400097096 | Potato | nucleus | 30.62 | 37.09 |
| GSMUA_Achr6P31520_001 | Banana | nucleus | 34.5 | 36.48 |
| GSMUA_Achr11P... | Banana | nucleus | 40.31 | 36.24 |
| GSMUA_Achr11P... | Banana | nucleus | 41.86 | 35.64 |
| PGSC0003DMT400067321 | Potato | nucleus | 33.72 | 35.51 |
| PGSC0003DMT400035748 | Potato | nucleus | 31.78 | 35.5 |
| PGSC0003DMT400067318 | Potato | nucleus | 33.33 | 35.39 |
| PGSC0003DMT400097604 | Potato | nucleus | 28.68 | 35.24 |
| PGSC0003DMT400067322 | Potato | nucleus | 33.33 | 35.1 |
| TraesCS2B01G399200.1 | Wheat | nucleus | 42.64 | 34.81 |
| TraesCS2D01G378400.2 | Wheat | nucleus | 42.64 | 34.81 |
| GSMUA_Achr5P03520_001 | Banana | nucleus | 40.7 | 34.65 |
| GSMUA_Achr2P18090_001 | Banana | nucleus | 40.31 | 34.32 |
| GSMUA_Achr4P27350_001 | Banana | nucleus | 39.15 | 33.67 |
| PGSC0003DMT400039029 | Potato | nucleus | 31.4 | 33.33 |
| TraesCS2A01G381900.2 | Wheat | nucleus | 42.25 | 33.33 |
| TraesCS2D01G444200.1 | Wheat | nucleus | 40.31 | 32.81 |
| PGSC0003DMT400070912 | Potato | nucleus | 32.95 | 32.69 |
| TraesCS6B01G292500.1 | Wheat | nucleus | 41.86 | 32.63 |
| Zm00001d026204_P001 | Maize | nucleus | 40.7 | 31.91 |
| TraesCS6D01G249200.1 | Wheat | nucleus | 41.47 | 31.85 |
| PGSC0003DMT400051510 | Potato | nucleus | 29.84 | 31.69 |
| PGSC0003DMT400021498 | Potato | nucleus | 29.46 | 31.67 |
| PGSC0003DMT400051513 | Potato | nucleus | 30.23 | 31.58 |
| PGSC0003DMT400093355 | Potato | nucleus | 29.46 | 31.54 |
| Os02t0695200-01 | Rice | nucleus | 41.47 | 31.47 |
| GSMUA_Achr5P18600_001 | Banana | nucleus | 40.31 | 31.23 |
| Zm00001d051520_P001 | Maize | nucleus | 39.92 | 30.29 |
| TraesCS2B01G466500.1 | Wheat | nucleus | 41.47 | 29.64 |
| EES12768 | Sorghum | nucleus | 42.64 | 29.26 |
| Os04t0517100-01 | Rice | nucleus | 20.16 | 29.21 |
| TraesCS2D01G444300.1 | Wheat | nucleus | 41.09 | 29.2 |
| TraesCS2B01G466400.1 | Wheat | nucleus | 39.92 | 29.01 |
| TraesCS2A01G445500.1 | Wheat | nucleus | 40.7 | 28.61 |
| PGSC0003DMT400086165 | Potato | nucleus | 31.78 | 28.57 |
| EES05685 | Sorghum | nucleus | 42.25 | 28.09 |
| Zm00001d026203_P001 | Maize | nucleus | 41.47 | 28.01 |
| Os04t0594100-01 | Rice | nucleus | 39.92 | 27.76 |
| Zm00001d002476_P001 | Maize | nucleus | 40.7 | 25.93 |
| PGSC0003DMT400021503 | Potato | nucleus | 18.6 | 25.0 |
| HORVU6Hr1G067380.1 | Barley | nucleus | 42.64 | 24.94 |
| PGSC0003DMT400021501 | Potato | nucleus | 18.99 | 24.87 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:102586398 | MapMan:15.5.2.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | UniProt:M1BS18 | InterPro:Myb_dom | PFAM:PF00249 |
| EnsemblPlantsGene:PGSC0003DMG400020071 | PGSC:PGSC0003DMG400020071 | EnsemblPlants:PGSC0003DMT400051682 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF695 |
| InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI000296616A | RefSeq:XP_006352742.1 | SEG:seg |
Description
MYB8 [Source:PGSC_GENE;Acc:PGSC0003DMG400020071]
Coordinates
chr6:-:58756763..58758225
Molecular Weight (calculated)
29738.4 Da
IEP (calculated)
4.631
GRAVY (calculated)
-0.882
Length
258 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRSPCCEKL GLKRGPWSKE EDDLLINYIK KNGHPNWRAL PKLAGLLRCG KSCRLRWTNY LRPDIKRGNF THQEEDTIIK LHQVLGNSWS AIAARLPGRT
101: DNEIKNIWHT RLKKKMNESQ PQETPDIQSE PENSNVDIHL EEANNSKDNN SEISSPKINT EIQQQPSSSS STSSSSEYSY SNTIATSSES RNQIMSDNLL
201: EVDDDIWSEV VWAPVDDNYL DLSLMEDNYQ INCSFNDNWF WDDLFTRSNE LMLELPEL
101: DNEIKNIWHT RLKKKMNESQ PQETPDIQSE PENSNVDIHL EEANNSKDNN SEISSPKINT EIQQQPSSSS STSSSSEYSY SNTIATSSES RNQIMSDNLL
201: EVDDDIWSEV VWAPVDDNYL DLSLMEDNYQ INCSFNDNWF WDDLFTRSNE LMLELPEL
001: MGRRPCCEKI GLKKGPWSAE EDRILINYIS LHGHPNWRAL PKLAGLLRCG KSCRLRWINY LRPDIKRGNF TPHEEDTIIS LHQLLGNRWS AIAAKLPGRT
101: DNEIKNVWHT HLKKRLHHSQ DQNNKEDFVS TTAAEMPTSP QQQSSSSADI SAITTLGNNN DISNSNKDSA TSSEDVLAII DESFWSEVVL MDCDISGNEK
201: NEKKIENWEG SLDRNDKGYN HDMEFWFDHL TSSSCIIGEM SDISEF
101: DNEIKNVWHT HLKKRLHHSQ DQNNKEDFVS TTAAEMPTSP QQQSSSSADI SAITTLGNNN DISNSNKDSA TSSEDVLAII DESFWSEVVL MDCDISGNEK
201: NEKKIENWEG SLDRNDKGYN HDMEFWFDHL TSSSCIIGEM SDISEF
Arabidopsis Description
ATMYB13Transcription factor MYB13 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNC9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.