Factsheet for Os04t0594100-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0267900-01
Os01t0279300-01
Os01t0810300-01
Os03t0319300-01
Os03t0743500-02
Os05t0491000-01
Os05t0491100-01
Os07t0687200-02
Os12t0603800-00

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G31180.1	Os01t0267900-01	AT2G41090.1	17360592
AT2G31180.1	Os01t0279300-01	AT2G41090.1	17360592
AT2G31180.1	Os01t0810300-01	AT2G41090.1	17360592
AT2G31180.1	Os03t0319300-01	AT2G41090.1	17360592
AT2G31180.1	Os05t0491000-01	AT2G41090.1	17360592
AT2G31180.1	Os05t0491100-01	AT2G41090.1	17360592
AT2G31180.1	Os07t0687200-02	AT2G41090.1	17360592
AT2G31180.1	Os12t0603800-00	AT2G41090.1	17360592
AT2G31180.1	Os01t0267900-01	AT2G41100.1	17360592
AT2G31180.1	Os01t0279300-01	AT2G41100.1	17360592
AT2G31180.1	Os01t0810300-01	AT2G41100.1	17360592
AT2G31180.1	Os03t0319300-01	AT2G41100.1	17360592
AT2G31180.1	Os05t0491000-01	AT2G41100.1	17360592
AT2G31180.1	Os05t0491100-01	AT2G41100.1	17360592
AT2G31180.1	Os07t0687200-02	AT2G41100.1	17360592
AT2G31180.1	Os12t0603800-00	AT2G41100.1	17360592
AT2G31180.1	Os03t0743500-02	AT4G14640.1	17360592
AT2G31180.1	Os01t0267900-01	AT5G21274.1	17360592
AT2G31180.1	Os01t0279300-01	AT5G21274.1	17360592
AT2G31180.1	Os01t0810300-01	AT5G21274.1	17360592
AT2G31180.1	Os03t0319300-01	AT5G21274.1	17360592
AT2G31180.1	Os05t0491000-01	AT5G21274.1	17360592
AT2G31180.1	Os05t0491100-01	AT5G21274.1	17360592
AT2G31180.1	Os07t0687200-02	AT5G21274.1	17360592
AT2G31180.1	Os12t0603800-00	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G444200.1	Wheat	nucleus	64.69	75.71
TraesCS2D01G444300.1	Wheat	nucleus	70.62	72.18
TraesCS2B01G466500.1	Wheat	nucleus	70.08	72.02
TraesCS2A01G445500.1	Wheat	nucleus	71.16	71.93
TraesCS2B01G466400.1	Wheat	nucleus	67.39	70.42
Zm00001d026204_P001	Maize	nucleus	58.22	65.65
EES12768	Sorghum	nucleus	64.96	64.1
VIT_05s0049g01010.t01	Wine grape	nucleus	24.8	63.89
Zm00001d002476_P001	Maize	nucleus	68.73	62.96
Zm00001d026203_P001	Maize	nucleus	64.42	62.57
Os02t0695200-01	Rice	nucleus	55.26	60.29
PGSC0003DMT400034263	Potato	mitochondrion	12.67	55.29
GSMUA_Achr2P18090_001	Banana	nucleus	43.13	52.81
GSMUA_Achr11P...	Banana	nucleus	40.16	51.92
GSMUA_Achr4P28850_001	Banana	nucleus	38.01	51.84
GSMUA_Achr5P03520_001	Banana	nucleus	41.24	50.49
KRH56057	Soybean	nucleus	21.56	50.0
GSMUA_Achr6P31520_001	Banana	nucleus	32.08	48.77
GSMUA_Achr4P27350_001	Banana	nucleus	38.27	47.33
KRH34142	Soybean	nucleus	25.88	45.71
Solyc05g055030.1.1	Tomato	nucleus	26.68	45.41
PGSC0003DMT400060168	Potato	nucleus	26.68	45.0
KRH68789	Soybean	nucleus	25.07	44.5
KRG97042	Soybean	nucleus	25.34	44.34
AT1G06180.1	Thale cress	nucleus	28.84	43.5
VIT_05s0049g01020.t01	Wine grape	nucleus	29.65	43.48
Bra021708.1-P	Field mustard	nucleus	29.11	43.2
Os02t0624300-01	Rice	nucleus	29.92	43.02
KRH31704	Soybean	nucleus	30.46	42.8
KRH69121	Soybean	nucleus	30.46	42.8
AT2G31180.1	Thale cress	nucleus	28.3	42.17
Bra015481.1-P	Field mustard	nucleus	28.57	42.06
VIT_07s0005g03340.t01	Wine grape	nucleus	30.19	41.64
Bra018267.1-P	Field mustard	nucleus	28.3	41.5
Bra022831.1-P	Field mustard	nucleus	27.49	41.46
KRG92419	Soybean	nucleus	30.19	41.18
Solyc06g083900.2.1	Tomato	nucleus	28.3	41.18
Solyc06g053610.2.1	Tomato	nucleus	29.38	41.13
KRH34387	Soybean	nucleus	30.46	41.09
PGSC0003DMT400044362	Potato	nucleus	29.65	41.04
KRH22481	Soybean	nucleus	25.07	40.97
PGSC0003DMT400034878	Potato	nucleus	27.76	40.87
Solyc09g090130.2.1	Tomato	nucleus	29.38	40.67
KRH32183	Soybean	nucleus	25.88	40.51
PGSC0003DMT400042007	Potato	nucleus	29.11	40.3
PGSC0003DMT400051682	Potato	nucleus	27.76	39.92
KRH56060	Soybean	nucleus	24.53	39.57
Os10t0478300-01	Rice	nucleus	29.38	39.49
Solyc03g005570.2.1	Tomato	nucleus	26.68	39.44
KRH56061	Soybean	nucleus	25.61	39.26
KRH25458	Soybean	nucleus	24.26	38.46
VIT_12s0134g00480.t01	Wine grape	nucleus	26.42	38.13
Solyc07g054960.1.1	Tomato	nucleus	21.83	37.5
KRH56056	Soybean	nucleus	23.72	37.45
KRH67378	Soybean	nucleus	29.65	37.41
Solyc12g005640.1.1	Tomato	nucleus	23.45	37.34
KRG95664	Soybean	nucleus	29.11	37.11
PGSC0003DMT400035748	Potato	nucleus	22.64	36.36
KRH25468	Soybean	nucleus	22.91	36.32
PGSC0003DMT400097096	Potato	nucleus	20.75	36.15
PGSC0003DMT400067321	Potato	nucleus	23.72	35.92
PGSC0003DMT400067318	Potato	nucleus	23.45	35.8
VIT_12s0134g00490.t01	Wine grape	nucleus	24.26	35.71
Solyc07g053240.2.1	Tomato	nucleus	23.72	35.34
PGSC0003DMT400097604	Potato	nucleus	19.95	35.24
PGSC0003DMT400067322	Potato	nucleus	23.18	35.1
Solyc07g053230.2.1	Tomato	nucleus	23.72	35.06
Solyc06g034000.1.1	Tomato	nucleus	22.1	34.75
VIT_00s0203g00170.t01	Wine grape	nucleus	24.8	34.33
Solyc07g055000.1.1	Tomato	nucleus	22.37	34.3
Solyc06g033870.1.1	Tomato	nucleus	22.64	34.01
KRH26874	Soybean	nucleus	22.91	33.86
Solyc03g093940.1.1	Tomato	nucleus	19.68	33.64
PGSC0003DMT400093355	Potato	nucleus	21.83	33.61
PGSC0003DMT400051513	Potato	nucleus	22.1	33.2
PGSC0003DMT400051510	Potato	nucleus	21.56	32.92
Solyc03g093930.2.1	Tomato	nucleus	21.56	32.65
PGSC0003DMT400070912	Potato	nucleus	22.64	32.31
PGSC0003DMT400039029	Potato	nucleus	21.02	32.1
KRH26875	Soybean	nucleus	26.68	31.63
KRH56059	Soybean	nucleus	26.95	30.86
Solyc03g093890.2.1	Tomato	nucleus	21.02	30.83
KRH25461	Soybean	nucleus	25.34	30.82
KRH56058	Soybean	nucleus	26.15	30.5
PGSC0003DMT400021498	Potato	nucleus	19.41	30.0
KRH25459	Soybean	nucleus	23.99	29.57
PGSC0003DMT400086165	Potato	nucleus	21.29	27.53
Os04t0517100-01	Rice	nucleus	12.13	25.28
PGSC0003DMT400021503	Potato	nucleus	12.94	25.0
PGSC0003DMT400021501	Potato	nucleus	13.21	24.87
Solyc07g054980.1.1	Tomato	nucleus	25.88	20.51
CDX73801	Canola	nucleus	2.16	11.94

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.1	EntrezGene:4336841	ProteinID:BAF15640.1	ProteinID:BAS90778.1	ProteinID:CAE04147.1
GO:GO:0000981	GO:GO:0001135	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006357	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0030154
GO:GO:0043565	GO:GO:0044212	InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom	EnsemblPlantsGene:Os04g0594100
EnsemblPlants:Os04t0594100-01	PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR10641	PANTHER:PTHR10641:SF596	UniProt:Q0JAJ7
InterPro:SANT/Myb	SMART:SM00717	SUPFAM:SSF46689	UniParc:UPI00001B1F2A	RefSeq:XP_015635813.1	SEG:seg

Description

myb transcription factor 58/63, transcription factor MYB58/63MYB transcription factor, Regulation of cellulose biosynthesis during secondary cell wall formation (Os04t0594100-01)

Coordinates

chr4:-:30028840..30030685

Molecular Weight (calculated)

39770.5 Da

IEP (calculated)

4.681

GRAVY (calculated)

-0.518

Length

371 amino acids

Sequence
(BLAST)

001: MGKGRAPCCA KVGLNKGSWT PEEDMRLVAY IQKYGHANWR ALPKQAGLLR CGKSCRLRWI NYLRPDLKRG NFTAEEEETI IKLHGLLGNK WSKIASCLPG
101: RTDNEIKNVW NTHLKKRVSP EQKKGGGKSK KKTTCTDVLV PSPSPSSSTT TTTNCSSGDS AGEQSNTSKE EEEETDKIEI PMLELDPCCF DFDMLVDPVV
201: PDTYCPAVSA SASASAPTSP CSSTSPSCAR AGVDPLLDLP EIVDLGPELW SIMDGGAGDG CTEAPPPAWS NAAAAAAANA TVATTTSLEE EEGKEWWLED
301: LEKELGLWGP TDDYHCHPGP QGQPGRAGPP PSAVVEDPVS CYFQAGPTAA ATWQGHEPSA VITSNPMDYY V

Best Arabidopsis Sequence Match ( AT1G79180.1 )
(BLAST)

001: MGKGRAPCCD KTKVKRGPWS PEEDIKLISF IQKFGHENWR SLPKQSGLLR CGKSCRLRWI NYLRPDLKRG NFTSEEEETI IKLHHNYGNK WSKIASQLPG
101: RTDNEIKNVW HTHLKKRLAQ SSGTADEPAS PCSSDSVSRG KDDKSSHVED SLNRETNHRN ELSTSMSSGG SNQQDDPKID ELRFEYIEEA YSEFNDIIIQ
201: EVDKPDLLEI PFDSDPDIWS FLDTSNSFQQ STANENSSGS RATTEEESDE DEVKKWFKHL ESELGLEEDD NQQQYKEEES SSSSLLKNYE LMIH

Arabidopsis Description

ATMYB63myb domain protein 63 [Source:TAIR;Acc:AT1G79180]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.