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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 6
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc07g053230.2.1 Tomato nucleus 87.95 87.25
PGSC0003DMT400067321 Potato nucleus 84.74 86.12
PGSC0003DMT400067322 Potato nucleus 81.93 83.27
Solyc07g055000.1.1 Tomato nucleus 78.71 80.99
GSMUA_Achr4P18180_001 Banana nucleus 32.13 54.79
Solyc12g005640.1.1 Tomato nucleus 43.78 46.78
KRH56060 Soybean nucleus 40.56 43.91
KRH22481 Soybean nucleus 39.76 43.61
VIT_12s0134g00480.t01 Wine grape nucleus 44.98 43.58
KRH25458 Soybean nucleus 40.56 43.16
Solyc07g054960.1.1 Tomato nucleus 34.54 39.81
Solyc07g054980.1.1 Tomato nucleus 74.7 39.74
GSMUA_Achr5P14600_001 Banana nucleus 36.55 39.74
KRH56061 Soybean nucleus 37.75 38.84
GSMUA_Achr11P... Banana nucleus 35.74 37.87
GSMUA_Achr1P09180_001 Banana nucleus 34.94 37.83
KRH26874 Soybean nucleus 37.75 37.45
Solyc05g055030.1.1 Tomato nucleus 32.53 37.16
KRH25461 Soybean nucleus 45.38 37.05
GSMUA_Achr4P21910_001 Banana nucleus 32.53 36.99
Solyc10g005550.1.1 Tomato nucleus 35.34 36.21
Solyc03g093940.1.1 Tomato nucleus 31.33 35.94
TraesCS6A01G224400.1 Wheat nucleus 34.54 35.68
KRH26875 Soybean nucleus 44.58 35.46
TraesCS6D01G210500.1 Wheat nucleus 34.14 35.42
KRH56058 Soybean nucleus 44.98 35.22
TraesCS6D01G210800.1 Wheat nucleus 30.92 35.16
TraesCS6B01G257000.1 Wheat nucleus 34.14 34.98
TraesCS6D01G211200.1 Wheat nucleus 34.14 34.84
HORVU6Hr1G058640.1 Barley nucleus 34.14 34.84
GSMUA_Achr5P03920_001 Banana nucleus 33.33 34.58
HORVU6Hr1G058580.1 Barley nucleus 33.73 34.57
Solyc09g090130.2.1 Tomato nucleus 36.95 34.33
TraesCS6D01G210900.1 Wheat nucleus 33.33 34.3
Solyc03g005570.2.1 Tomato nucleus 34.54 34.26
TraesCS6D01G211400.1 Wheat nucleus 34.94 34.25
GSMUA_Achr4P28850_001 Banana nucleus 37.35 34.19
GSMUA_Achr6P31520_001 Banana nucleus 33.33 34.02
Zm00001d017268_P001 Maize nucleus 33.33 34.02
Solyc06g053610.2.1 Tomato nucleus 36.14 33.96
Solyc03g093930.2.1 Tomato nucleus 33.33 33.88
TraesCS6D01G211100.1 Wheat nucleus 34.14 33.86
TraesCS6B01G257200.1 Wheat nucleus 34.54 33.86
TraesCS6B01G257100.1 Wheat nucleus 34.14 33.73
KRH56059 Soybean nucleus 43.78 33.64
TraesCS6A01G224300.1 Wheat nucleus 33.73 33.6
TraesCS6B01G257300.1 Wheat nucleus 34.14 33.6
TraesCS6A01G224200.1 Wheat nucleus 34.14 33.6
EES07173 Sorghum nucleus 34.54 33.33
Os02t0624300-01 Rice nucleus 34.54 33.33
TraesCS6A01G224000.1 Wheat nucleus 34.14 33.2
Solyc06g083900.2.1 Tomato nucleus 33.73 32.94
TraesCS6A01G224100.1 Wheat nucleus 33.73 32.68
EES12516 Sorghum nucleus 35.34 32.35
Zm00001d051149_P001 Maize nucleus 33.73 32.31
Solyc03g093890.2.1 Tomato nucleus 32.13 31.62
Zm00001d025864_P001 Maize nucleus 34.94 31.41
KRH25459 Soybean nucleus 37.75 31.23
TraesCS1A01G155300.1 Wheat nucleus 32.93 31.18
TraesCS1D01G154000.1 Wheat nucleus 32.93 31.18
Zm00001d003064_P001 Maize nucleus 36.55 30.95
Solyc06g034000.1.1 Tomato nucleus 29.32 30.93
TraesCS6A01G265300.1 Wheat nucleus 32.53 30.92
Solyc06g033870.1.1 Tomato nucleus 30.52 30.77
Os10t0478300-01 Rice nucleus 33.73 30.43
TraesCS1B01G172500.1 Wheat nucleus 31.73 30.38
Zm00001d032694_P001 Maize nucleus 32.93 30.15
HORVU6Hr1G058620.1 Barley nucleus 34.94 30.0
HORVU6Hr1G058630.3 Barley nucleus, plastid 34.54 29.55
Zm00001d014029_P001 Maize nucleus 32.93 29.5
GSMUA_Achr5P03520_001 Banana nucleus 35.74 29.37
GSMUA_Achr4P27350_001 Banana nucleus 35.34 29.33
EER91482 Sorghum nucleus 34.14 28.72
GSMUA_Achr2P18090_001 Banana nucleus 34.94 28.71
GSMUA_Achr11P... Banana nucleus 32.93 28.57
Zm00001d026204_P001 Maize nucleus 36.95 27.96
TraesCS2D01G444200.1 Wheat nucleus 34.94 27.44
TraesCS2B01G399200.1 Wheat nucleus 33.73 26.58
TraesCS2D01G378400.2 Wheat nucleus 33.73 26.58
GSMUA_Achr11P... Banana nucleus 31.73 26.07
GSMUA_Achr5P18600_001 Banana nucleus 34.54 25.83
TraesCS2A01G381900.2 Wheat nucleus 33.73 25.69
Zm00001d051520_P001 Maize nucleus 34.54 25.29
TraesCS6B01G292500.1 Wheat nucleus 33.33 25.08
TraesCS6D01G249200.1 Wheat nucleus 33.73 25.0
Os02t0695200-01 Rice nucleus 33.33 24.41
Zm00001d026203_P001 Maize nucleus 36.95 24.08
TraesCS2D01G444300.1 Wheat nucleus 34.94 23.97
TraesCS2B01G466400.1 Wheat nucleus 34.14 23.94
EES12768 Sorghum nucleus 36.14 23.94
TraesCS2B01G466500.1 Wheat nucleus 34.54 23.82
Os04t0594100-01 Rice nucleus 35.34 23.72
TraesCS2A01G445500.1 Wheat nucleus 34.54 23.43
EES05685 Sorghum nucleus 34.54 22.16
Zm00001d002476_P001 Maize nucleus 35.74 21.98
Os04t0517100-01 Rice nucleus 13.65 19.1
HORVU6Hr1G067380.1 Barley nucleus 32.53 18.37
Protein Annotations
Gene3D:1.10.10.60MapMan:15.5.2.1GO:GO:0000981GO:GO:0001135GO:GO:0003674GO:GO:0003676
GO:GO:0003677GO:GO:0003700GO:GO:0005488GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005634GO:GO:0006139GO:GO:0006357GO:GO:0008150GO:GO:0008152GO:GO:0009058
GO:GO:0009987GO:GO:0030154GO:GO:0043565GO:GO:0044212InterPro:Homeobox-like_sfInterPro:IPR017930
UniProt:K4CFM2InterPro:Myb_domPFAM:PF00249PFscan:PS51294PANTHER:PTHR10641PANTHER:PTHR10641:SF541
InterPro:SANT/MybSMART:SM00717SUPFAM:SSF46689EnsemblPlantsGene:Solyc07g053240.2EnsemblPlants:Solyc07g053240.2.1UniParc:UPI000276BE1C
SEG:seg:::::
Description
No Description!
Coordinates
chr7:+:61710088..61711189
Molecular Weight (calculated)
28931.4 Da
IEP (calculated)
6.420
GRAVY (calculated)
-0.986
Length
249 amino acids
Sequence
(BLAST)
001: MVRTPCHDEH GRKKGTWTPE EDRKLAAYIT KYGSWNWRQL PKYAGLARCG KSCRLRWMNY LRPNVKRGNY TKEEDEIILN LHAQLGNKWS TIASHLPGRS
101: DNEIKNHWHT TVKKRADYNS SEGSKKCNNK KSESDITKRK SNVENQNAIG DNNNNNNTMH ENVILENSEW SSSEDLSSID YQQDIFQEEL ANLEDITSGS
201: FWTQPFEVDT KIDFVAPSID YCGLICPPSP FISHEFLSSF DLDHYDYNW
Best Arabidopsis Sequence Match ( AT2G31180.1 )
(BLAST)
001: MGRAPCCEKM GVKRGPWTPE EDQILINYIH LYGHSNWRAL PKHAGLLRCG KSCRLRWINY LRPDIKRGNF TPQEEQTIIN LHESLGNRWS AIAAKLPGRT
101: DNEIKNVWHT HLKKRLSKNL NNGGDTKDVN GINETTNEDK GSVIVDTASL QQFSNSITTF DISNDNKDDI MSYEDISALI DDSFWSDVIS VDNSNKNEKK
201: IEDWEGLIDR NSKKCSYSNS KLYNDDMEFW FDVFTSNRRI EEFSDIPEF
Arabidopsis Description
MYB14Transcription factor MYB14 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJX8]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.