Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d017268_P001 | Maize | nucleus | 76.15 | 81.15 |
| EES07173 | Sorghum | nucleus | 79.23 | 79.84 |
| VIT_05s0049g01010.t01 | Wine grape | nucleus | 42.69 | 77.08 |
| Os02t0624300-01 | Rice | nucleus | 71.54 | 72.09 |
| HORVU6Hr1G058640.1 | Barley | nucleus | 66.92 | 71.31 |
| TraesCS6D01G211200.1 | Wheat | nucleus | 65.77 | 70.08 |
| TraesCS6D01G210500.1 | Wheat | nucleus | 64.23 | 69.58 |
| TraesCS6B01G257300.1 | Wheat | nucleus | 67.69 | 69.57 |
| TraesCS6B01G257000.1 | Wheat | nucleus | 65.0 | 69.55 |
| TraesCS6D01G210900.1 | Wheat | nucleus | 64.62 | 69.42 |
| TraesCS6D01G211100.1 | Wheat | nucleus | 66.92 | 69.32 |
| TraesCS6B01G257100.1 | Wheat | nucleus | 66.92 | 69.05 |
| TraesCS6A01G224400.1 | Wheat | nucleus | 63.85 | 68.88 |
| TraesCS6B01G257200.1 | Wheat | nucleus | 66.54 | 68.11 |
| TraesCS6A01G224100.1 | Wheat | nucleus | 66.92 | 67.7 |
| TraesCS6A01G224300.1 | Wheat | nucleus | 65.0 | 67.6 |
| HORVU6Hr1G058580.1 | Barley | nucleus | 63.08 | 67.49 |
| TraesCS6D01G211400.1 | Wheat | nucleus | 65.77 | 67.32 |
| TraesCS6A01G224000.1 | Wheat | nucleus | 65.77 | 66.8 |
| TraesCS6A01G224200.1 | Wheat | nucleus | 64.62 | 66.4 |
| HORVU6Hr1G058620.1 | Barley | nucleus | 66.54 | 59.66 |
| TraesCS6D01G210800.1 | Wheat | nucleus | 49.23 | 58.45 |
| HORVU6Hr1G058630.3 | Barley | nucleus, plastid | 64.62 | 57.73 |
| PGSC0003DMT400034263 | Potato | mitochondrion | 18.08 | 55.29 |
| Zm00001d025864_P001 | Maize | nucleus | 58.46 | 54.87 |
| KRH68789 | Soybean | nucleus | 40.77 | 50.72 |
| Zm00001d003064_P001 | Maize | nucleus | 57.31 | 50.68 |
| AT1G06180.1 | Thale cress | nucleus | 47.69 | 50.41 |
| KRH34142 | Soybean | nucleus | 40.38 | 50.0 |
| VIT_05s0049g01020.t01 | Wine grape | nucleus | 48.46 | 49.8 |
| PGSC0003DMT400044362 | Potato | nucleus | 51.15 | 49.63 |
| Solyc09g090130.2.1 | Tomato | nucleus | 51.15 | 49.63 |
| PGSC0003DMT400034878 | Potato | nucleus | 48.08 | 49.6 |
| PGSC0003DMT400060168 | Potato | nucleus | 41.92 | 49.55 |
| KRG97042 | Soybean | nucleus | 40.38 | 49.53 |
| KRH56057 | Soybean | nucleus | 30.0 | 48.75 |
| Solyc05g055030.1.1 | Tomato | nucleus | 40.77 | 48.62 |
| KRH32183 | Soybean | nucleus | 43.46 | 47.68 |
| Solyc03g005570.2.1 | Tomato | nucleus | 45.77 | 47.41 |
| Bra022831.1-P | Field mustard | nucleus | 44.62 | 47.15 |
| Bra015481.1-P | Field mustard | nucleus | 45.38 | 46.83 |
| Solyc06g053610.2.1 | Tomato | nucleus | 47.69 | 46.79 |
| PGSC0003DMT400042007 | Potato | nucleus | 48.08 | 46.64 |
| AT2G31180.1 | Thale cress | nucleus | 44.62 | 46.59 |
| Bra021708.1-P | Field mustard | nucleus | 44.62 | 46.4 |
| KRH69121 | Soybean | nucleus | 46.54 | 45.83 |
| VIT_07s0005g03340.t01 | Wine grape | nucleus | 47.31 | 45.72 |
| Solyc06g083900.2.1 | Tomato | nucleus | 44.62 | 45.49 |
| KRH22481 | Soybean | nucleus | 39.62 | 45.37 |
| KRG92419 | Soybean | nucleus | 47.31 | 45.22 |
| KRH31704 | Soybean | nucleus | 45.77 | 45.08 |
| Bra018267.1-P | Field mustard | nucleus | 43.46 | 44.66 |
| PGSC0003DMT400051682 | Potato | nucleus | 44.23 | 44.57 |
| KRH67378 | Soybean | nucleus | 50.38 | 44.56 |
| Zm00001d032694_P001 | Maize | nucleus | 46.54 | 44.49 |
| KRG95664 | Soybean | nucleus | 49.62 | 44.33 |
| KRH34387 | Soybean | nucleus | 46.54 | 44.0 |
| Zm00001d014029_P001 | Maize | nucleus | 46.54 | 43.53 |
| KRH25458 | Soybean | nucleus | 37.31 | 41.45 |
| PGSC0003DMT400035748 | Potato | nucleus | 36.15 | 40.69 |
| KRH56060 | Soybean | nucleus | 35.77 | 40.43 |
| PGSC0003DMT400097096 | Potato | nucleus | 33.08 | 40.38 |
| VIT_12s0134g00480.t01 | Wine grape | nucleus | 39.62 | 40.08 |
| Solyc12g005640.1.1 | Tomato | nucleus | 35.38 | 39.48 |
| KRH56061 | Soybean | nucleus | 36.54 | 39.26 |
| PGSC0003DMT400097604 | Potato | nucleus | 31.15 | 38.57 |
| Solyc07g054960.1.1 | Tomato | nucleus | 31.92 | 38.43 |
| PGSC0003DMT400067318 | Potato | nucleus | 33.85 | 36.21 |
| KRH25468 | Soybean | nucleus | 32.31 | 35.9 |
| VIT_12s0134g00490.t01 | Wine grape | nucleus | 34.62 | 35.71 |
| KRH56056 | Soybean | nucleus | 31.92 | 35.32 |
| PGSC0003DMT400067321 | Potato | nucleus | 33.08 | 35.1 |
| Solyc03g093940.1.1 | Tomato | nucleus | 29.23 | 35.02 |
| KRH26874 | Soybean | nucleus | 33.46 | 34.66 |
| Zm00001d026204_P001 | Maize | nucleus | 43.85 | 34.65 |
| Solyc06g033870.1.1 | Tomato | nucleus | 32.69 | 34.41 |
| Solyc07g053230.2.1 | Tomato | nucleus | 33.08 | 34.26 |
| PGSC0003DMT400067322 | Potato | nucleus | 31.92 | 33.88 |
| Solyc07g053240.2.1 | Tomato | nucleus | 32.31 | 33.73 |
| PGSC0003DMT400093355 | Potato | nucleus | 31.15 | 33.61 |
| Zm00001d051520_P001 | Maize | nucleus | 43.85 | 33.53 |
| Solyc06g034000.1.1 | Tomato | nucleus | 30.38 | 33.47 |
| Solyc07g055000.1.1 | Tomato | nucleus | 31.15 | 33.47 |
| PGSC0003DMT400039029 | Potato | nucleus | 30.77 | 32.92 |
| VIT_00s0203g00170.t01 | Wine grape | nucleus | 33.85 | 32.84 |
| Solyc03g093930.2.1 | Tomato | nucleus | 29.62 | 31.43 |
| PGSC0003DMT400051510 | Potato | nucleus | 29.23 | 31.28 |
| PGSC0003DMT400051513 | Potato | nucleus | 29.62 | 31.17 |
| KRH25461 | Soybean | nucleus | 36.54 | 31.15 |
| KRH56058 | Soybean | nucleus | 38.08 | 31.13 |
| Solyc03g093890.2.1 | Tomato | nucleus | 30.0 | 30.83 |
| PGSC0003DMT400070912 | Potato | nucleus | 30.77 | 30.77 |
| KRH56059 | Soybean | nucleus | 38.08 | 30.56 |
| Zm00001d026203_P001 | Maize | nucleus | 44.23 | 30.1 |
| PGSC0003DMT400086165 | Potato | nucleus | 33.08 | 29.97 |
| PGSC0003DMT400021498 | Potato | nucleus | 27.31 | 29.58 |
| KRH26875 | Soybean | nucleus | 35.38 | 29.39 |
| KRH25459 | Soybean | nucleus | 33.85 | 29.24 |
| Zm00001d002476_P001 | Maize | nucleus | 45.38 | 29.14 |
| PGSC0003DMT400021503 | Potato | nucleus | 18.46 | 25.0 |
| PGSC0003DMT400021501 | Potato | nucleus | 18.85 | 24.87 |
| Solyc07g054980.1.1 | Tomato | nucleus | 33.85 | 18.8 |
| CDX73801 | Canola | nucleus | 1.54 | 5.97 |
Protein Annotations
| EnsemblPlants:Zm00001d051149_P001 | EnsemblPlants:Zm00001d051149_T001 | EnsemblPlantsGene:Zm00001d051149 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF695 | PFAM:PF00249 | PFscan:PS51294 | ProteinID:AQK53718.1 | SEG:seg |
| SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0002216469 | UniProt:K7TYD9 | MapMan:15.5.2.1 | : |
Description
myb transcription factor39 myb transcription factor39
Coordinates
chr4:-:145959279..145960656
Molecular Weight (calculated)
29100.1 Da
IEP (calculated)
7.116
GRAVY (calculated)
-0.775
Length
260 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRSPCCEKM GLKRGPWTAE EDRILVAHVE RHGHSNWRAL PKQAGLLRCG KSCRLRWINY LRPDIKRGNF SREEEDAIIQ LHQMLGNRWS TIAARLPGRT
101: DNEIKNVWHT HLKKRLEPKP ASQQAPKRKP TKKQQPQPEP EPVTTLEGPA GAVPPVAPER SLSTTTSTTT STADYSPASS LENAGDSFTS EEDYYQIDDS
201: FWSETLAMTT TVDSFESGVQ QAEGSFGKSA AAPSSTNDDM DFWLKLFMQA SDMQNLPQII
101: DNEIKNVWHT HLKKRLEPKP ASQQAPKRKP TKKQQPQPEP EPVTTLEGPA GAVPPVAPER SLSTTTSTTT STADYSPASS LENAGDSFTS EEDYYQIDDS
201: FWSETLAMTT TVDSFESGVQ QAEGSFGKSA AAPSSTNDDM DFWLKLFMQA SDMQNLPQII
001: MGRAPCCEKM GLKRGPWTPE EDQILVSFIL NHGHSNWRAL PKQAGLLRCG KSCRLRWMNY LKPDIKRGNF TKEEEDAIIS LHQILGNRWS AIAAKLPGRT
101: DNEIKNVWHT HLKKRLEDYQ PAKPKTSNKK KGTKPKSESV ITSSNSTRSE SELADSSNPS GESLFSTSPS TSEVSSMTLI SHDGYSNEIN MDNKPGDIST
201: IDQECVSFET FGADIDESFW KETLYSQDEH NYVSNDLEVA GLVEIQQEFQ NLGSANNEMI FDSEMDFWFD VLARTGGEQD LLAGL
101: DNEIKNVWHT HLKKRLEDYQ PAKPKTSNKK KGTKPKSESV ITSSNSTRSE SELADSSNPS GESLFSTSPS TSEVSSMTLI SHDGYSNEIN MDNKPGDIST
201: IDQECVSFET FGADIDESFW KETLYSQDEH NYVSNDLEVA GLVEIQQEFQ NLGSANNEMI FDSEMDFWFD VLARTGGEQD LLAGL
Arabidopsis Description
MYB15Transcription factor MYB15 [Source:UniProtKB/Swiss-Prot;Acc:Q9LTC4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.