Factsheet for Zm00001d026204_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
Predotar:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d005003_P002
Zm00001d008278_P001
Zm00001d010649_P001
Zm00001d028948_P001
Zm00001d033980_P001
Zm00001d038543_P004
Zm00001d038545_P001
Zm00001d041430_P001
Zm00001d043144_P001
Zm00001d047597_P001
Zm00001d052415_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G31180.1	Zm00001d005003_P002	AT2G41090.1	17360592
AT2G31180.1	Zm00001d008278_P001	AT2G41090.1	17360592
AT2G31180.1	Zm00001d010649_P001	AT2G41090.1	17360592
AT2G31180.1	Zm00001d028948_P001	AT2G41090.1	17360592
AT2G31180.1	Zm00001d038543_P004	AT2G41090.1	17360592
AT2G31180.1	Zm00001d038545_P001	AT2G41090.1	17360592
AT2G31180.1	Zm00001d041430_P001	AT2G41090.1	17360592
AT2G31180.1	Zm00001d043144_P001	AT2G41090.1	17360592
AT2G31180.1	Zm00001d047597_P001	AT2G41090.1	17360592
AT2G31180.1	Zm00001d052415_P001	AT2G41090.1	17360592
AT2G31180.1	Zm00001d005003_P002	AT2G41100.1	17360592
AT2G31180.1	Zm00001d008278_P001	AT2G41100.1	17360592
AT2G31180.1	Zm00001d010649_P001	AT2G41100.1	17360592
AT2G31180.1	Zm00001d028948_P001	AT2G41100.1	17360592
AT2G31180.1	Zm00001d038543_P004	AT2G41100.1	17360592
AT2G31180.1	Zm00001d038545_P001	AT2G41100.1	17360592
AT2G31180.1	Zm00001d041430_P001	AT2G41100.1	17360592
AT2G31180.1	Zm00001d043144_P001	AT2G41100.1	17360592
AT2G31180.1	Zm00001d047597_P001	AT2G41100.1	17360592
AT2G31180.1	Zm00001d052415_P001	AT2G41100.1	17360592
AT2G31180.1	Zm00001d033980_P001	AT4G14640.1	17360592
AT2G31180.1	Zm00001d005003_P002	AT5G21274.1	17360592
AT2G31180.1	Zm00001d008278_P001	AT5G21274.1	17360592
AT2G31180.1	Zm00001d010649_P001	AT5G21274.1	17360592
AT2G31180.1	Zm00001d028948_P001	AT5G21274.1	17360592
AT2G31180.1	Zm00001d038543_P004	AT5G21274.1	17360592
AT2G31180.1	Zm00001d038545_P001	AT5G21274.1	17360592
AT2G31180.1	Zm00001d041430_P001	AT5G21274.1	17360592
AT2G31180.1	Zm00001d043144_P001	AT5G21274.1	17360592
AT2G31180.1	Zm00001d047597_P001	AT5G21274.1	17360592
AT2G31180.1	Zm00001d052415_P001	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d026203_P001	Maize	nucleus	98.48	84.82
EES12768	Sorghum	nucleus	82.07	71.81
Zm00001d002476_P001	Maize	nucleus	83.28	67.65
VIT_05s0049g01010.t01	Wine grape	nucleus	27.66	63.19
TraesCS2D01G444200.1	Wheat	nucleus	60.79	63.09
Os04t0594100-01	Rice	nucleus	65.65	58.22
TraesCS2B01G466400.1	Wheat	nucleus	61.09	56.62
TraesCS2B01G466500.1	Wheat	nucleus	61.09	55.68
TraesCS2D01G444300.1	Wheat	nucleus	61.4	55.65
TraesCS2A01G445500.1	Wheat	nucleus	60.49	54.22
PGSC0003DMT400034263	Potato	mitochondrion	13.98	54.12
Zm00001d051520_P001	Maize	nucleus	52.28	50.59
KRH56057	Soybean	nucleus	24.01	49.38
GSMUA_Achr2P18090_001	Banana	nucleus	44.98	48.84
Zm00001d017268_P001	Maize	nucleus	35.56	47.95
GSMUA_Achr5P03520_001	Banana	nucleus	43.77	47.52
GSMUA_Achr11P...	Banana	nucleus	41.03	47.04
GSMUA_Achr4P28850_001	Banana	nucleus	38.6	46.69
KRH34142	Soybean	nucleus	29.79	46.67
GSMUA_Achr6P31520_001	Banana	nucleus	34.04	45.9
Solyc05g055030.1.1	Tomato	nucleus	30.09	45.41
KRH68789	Soybean	nucleus	28.57	44.98
PGSC0003DMT400060168	Potato	nucleus	29.79	44.55
KRG97042	Soybean	nucleus	28.57	44.34
GSMUA_Achr4P27350_001	Banana	nucleus	40.43	44.33
VIT_05s0049g01020.t01	Wine grape	nucleus	33.74	43.87
Zm00001d051149_P001	Maize	nucleus	34.65	43.85
AT1G06180.1	Thale cress	nucleus	32.52	43.5
Bra021708.1-P	Field mustard	nucleus	31.91	42.0
AT2G31180.1	Thale cress	nucleus	31.61	41.77
VIT_07s0005g03340.t01	Wine grape	nucleus	34.04	41.64
Solyc06g083900.2.1	Tomato	nucleus	32.22	41.57
Bra015481.1-P	Field mustard	nucleus	31.61	41.27
KRH69121	Soybean	nucleus	32.83	40.91
KRH31704	Soybean	nucleus	32.83	40.91
Bra018267.1-P	Field mustard	nucleus	31.31	40.71
PGSC0003DMT400051682	Potato	nucleus	31.91	40.7
Bra022831.1-P	Field mustard	nucleus	30.4	40.65
KRH32183	Soybean	nucleus	29.18	40.51
PGSC0003DMT400034878	Potato	nucleus	31.0	40.48
Zm00001d025864_P001	Maize	nucleus	33.43	39.71
KRG92419	Soybean	nucleus	32.83	39.71
KRH22481	Soybean	nucleus	27.36	39.65
Solyc06g053610.2.1	Tomato	nucleus	31.91	39.62
Zm00001d014029_P001	Maize	nucleus	33.43	39.57
PGSC0003DMT400044362	Potato	nucleus	32.22	39.55
Solyc03g005570.2.1	Tomato	nucleus	30.09	39.44
KRH34387	Soybean	nucleus	32.83	39.27
PGSC0003DMT400042007	Potato	nucleus	31.91	39.18
Solyc09g090130.2.1	Tomato	nucleus	31.91	39.18
KRG95664	Soybean	nucleus	34.65	39.18
KRH56060	Soybean	nucleus	27.36	39.13
Zm00001d032694_P001	Maize	nucleus	32.22	38.97
KRH67378	Soybean	nucleus	34.35	38.44
KRH56056	Soybean	nucleus	27.36	38.3
KRH25458	Soybean	nucleus	27.05	38.03
Solyc07g054960.1.1	Tomato	nucleus	24.92	37.96
VIT_12s0134g00480.t01	Wine grape	nucleus	29.48	37.74
KRH25468	Soybean	nucleus	26.75	37.61
Zm00001d003064_P001	Maize	nucleus	33.43	37.41
KRH56061	Soybean	nucleus	27.36	37.19
PGSC0003DMT400067321	Potato	nucleus	27.66	37.14
PGSC0003DMT400067318	Potato	nucleus	27.36	37.04
Solyc07g053240.2.1	Tomato	nucleus	27.96	36.95
Solyc07g053230.2.1	Tomato	nucleus	27.96	36.65
VIT_12s0134g00490.t01	Wine grape	nucleus	27.96	36.51
Solyc12g005640.1.1	Tomato	nucleus	25.84	36.48
PGSC0003DMT400035748	Potato	nucleus	25.53	36.36
PGSC0003DMT400067322	Potato	nucleus	27.05	36.33
PGSC0003DMT400097096	Potato	nucleus	23.4	36.15
PGSC0003DMT400097604	Potato	nucleus	22.8	35.71
Solyc07g055000.1.1	Tomato	nucleus	26.14	35.54
Solyc06g033870.1.1	Tomato	nucleus	26.14	34.82
VIT_00s0203g00170.t01	Wine grape	nucleus	28.27	34.7
Solyc06g034000.1.1	Tomato	nucleus	24.62	34.32
PGSC0003DMT400039029	Potato	nucleus	25.23	34.16
KRH26874	Soybean	nucleus	25.84	33.86
PGSC0003DMT400051513	Potato	nucleus	25.23	33.6
PGSC0003DMT400051510	Potato	nucleus	24.62	33.33
Solyc03g093940.1.1	Tomato	nucleus	21.88	33.18
KRH25461	Soybean	nucleus	30.4	32.79
PGSC0003DMT400093355	Potato	nucleus	24.01	32.78
Solyc03g093890.2.1	Tomato	nucleus	24.92	32.41
PGSC0003DMT400070912	Potato	nucleus	25.53	32.31
KRH26875	Soybean	nucleus	30.4	31.95
Solyc03g093930.2.1	Tomato	nucleus	23.71	31.84
KRH56059	Soybean	nucleus	31.0	31.48
KRH56058	Soybean	nucleus	30.4	31.45
PGSC0003DMT400021498	Potato	nucleus	22.8	31.25
KRH25459	Soybean	nucleus	27.05	29.57
PGSC0003DMT400086165	Potato	nucleus	24.32	27.87
PGSC0003DMT400021503	Potato	nucleus	13.98	23.96
PGSC0003DMT400021501	Potato	nucleus	14.29	23.86
Solyc07g054980.1.1	Tomato	nucleus	28.88	20.3
CDX73801	Canola	nucleus	2.13	10.45

Protein Annotations

EnsemblPlants:Zm00001d026204_P001	EnsemblPlants:Zm00001d026204_T001	EnsemblPlantsGene:Zm00001d026204	Gene3D:1.10.10.60	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom	InterPro:SANT/Myb
PANTHER:PTHR10641	PANTHER:PTHR10641:SF596	PFAM:PF00249	PFscan:PS51294	ProteinID:AQK45839.1	SEG:seg
SMART:SM00717	SUPFAM:SSF46689	UniParc:UPI0008434B4C	UniProt:A0A1D6JDD8	MapMan:15.5.2.1	:

Description

MYB-transcription factor 65Putative MYB DNA-binding domain superfamily protein

Coordinates

chr10:-:140872548..140874240

Molecular Weight (calculated)

35220.3 Da

IEP (calculated)

5.131

GRAVY (calculated)

-0.571

Length

329 amino acids

Sequence
(BLAST)

001: MGKGRAPCCA KVGLNKGSWT PEEDMRLIAY IQKYGHANWR ALPKQAGLLR CGKSCRLRWI NYLRPDLKRG NFTAEEEEAI IKLHGLLGNK WSKIASCLPG
101: RTDNEIKNVW NTHLKKRVSP AGEERGAAGS KKKKKKKTTK AAAGGGAEAP LPLPSPSPSS STTTTNFSSG DSGEQQSNNM SKEADDELDL ENFEMMPMLD
201: VDDPSFGFGT LVDTAPAPYG SAVSVSVSAA TSPCASSTSP PPASAPPGVD DLLVLPEIDI GHELWSIIDG DAAEAPAPCC QRNPAEPTNG ADAASHGAEG
301: KEWWLEDLER ELGLWGTVED YQYPMGPQA

Best Arabidopsis Sequence Match ( AT1G79180.1 )
(BLAST)

001: MGKGRAPCCD KTKVKRGPWS PEEDIKLISF IQKFGHENWR SLPKQSGLLR CGKSCRLRWI NYLRPDLKRG NFTSEEEETI IKLHHNYGNK WSKIASQLPG
101: RTDNEIKNVW HTHLKKRLAQ SSGTADEPAS PCSSDSVSRG KDDKSSHVED SLNRETNHRN ELSTSMSSGG SNQQDDPKID ELRFEYIEEA YSEFNDIIIQ
201: EVDKPDLLEI PFDSDPDIWS FLDTSNSFQQ STANENSSGS RATTEEESDE DEVKKWFKHL ESELGLEEDD NQQQYKEEES SSSSLLKNYE LMIH

Arabidopsis Description

ATMYB63myb domain protein 63 [Source:TAIR;Acc:AT1G79180]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.