Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_05s0049g01010.t01 | Wine grape | nucleus | 29.67 | 61.81 |
| GSMUA_Achr4P18180_001 | Banana | nucleus | 30.0 | 61.64 |
| GSMUA_Achr11P... | Banana | nucleus | 56.67 | 59.23 |
| GSMUA_Achr5P03520_001 | Banana | nucleus | 59.33 | 58.75 |
| PGSC0003DMT400034263 | Potato | mitochondrion | 14.67 | 51.76 |
| GSMUA_Achr4P28850_001 | Banana | nucleus | 44.67 | 49.26 |
| KRH56057 | Soybean | nucleus | 26.0 | 48.75 |
| GSMUA_Achr2P18090_001 | Banana | nucleus | 48.33 | 47.85 |
| TraesCS6A01G265300.1 | Wheat | nucleus | 41.0 | 46.95 |
| GSMUA_Achr6P31520_001 | Banana | nucleus | 37.67 | 46.31 |
| KRH34142 | Soybean | nucleus | 30.67 | 43.81 |
| PGSC0003DMT400060168 | Potato | nucleus | 31.33 | 42.73 |
| GSMUA_Achr11P... | Banana | nucleus | 33.33 | 42.55 |
| Os02t0695200-01 | Rice | nucleus | 48.0 | 42.35 |
| Solyc05g055030.1.1 | Tomato | nucleus | 30.67 | 42.2 |
| AT1G06180.1 | Thale cress | nucleus | 34.33 | 41.87 |
| GSMUA_Achr1P09180_001 | Banana | nucleus | 32.0 | 41.74 |
| KRH68789 | Soybean | nucleus | 29.0 | 41.63 |
| VIT_05s0049g01020.t01 | Wine grape | nucleus | 34.67 | 41.11 |
| KRG97042 | Soybean | nucleus | 29.0 | 41.04 |
| TraesCS2D01G444200.1 | Wheat | nucleus | 43.33 | 41.01 |
| TraesCS6B01G292500.1 | Wheat | nucleus | 45.0 | 40.79 |
| TraesCS6D01G249200.1 | Wheat | nucleus | 45.33 | 40.48 |
| Zm00001d026204_P001 | Maize | nucleus | 44.33 | 40.43 |
| Zm00001d051520_P001 | Maize | nucleus | 45.67 | 40.29 |
| PGSC0003DMT400034878 | Potato | nucleus | 33.67 | 40.08 |
| KRH31704 | Soybean | nucleus | 35.0 | 39.77 |
| GSMUA_Achr5P14600_001 | Banana | nucleus | 30.33 | 39.74 |
| Solyc06g083900.2.1 | Tomato | nucleus | 33.67 | 39.61 |
| GSMUA_Achr5P03920_001 | Banana | nucleus | 31.33 | 39.17 |
| PGSC0003DMT400051682 | Potato | nucleus | 33.67 | 39.15 |
| Solyc03g005570.2.1 | Tomato | nucleus | 32.67 | 39.04 |
| KRH69121 | Soybean | nucleus | 34.33 | 39.02 |
| PGSC0003DMT400044362 | Potato | nucleus | 34.67 | 38.81 |
| Bra015481.1-P | Field mustard | nucleus | 32.33 | 38.49 |
| PGSC0003DMT400042007 | Potato | nucleus | 34.33 | 38.43 |
| Solyc09g090130.2.1 | Tomato | nucleus | 34.33 | 38.43 |
| Bra021708.1-P | Field mustard | nucleus | 32.0 | 38.4 |
| GSMUA_Achr4P21910_001 | Banana | nucleus | 28.0 | 38.36 |
| KRH22481 | Soybean | nucleus | 29.0 | 38.33 |
| Os04t0594100-01 | Rice | nucleus | 47.33 | 38.27 |
| AT2G31180.1 | Thale cress | nucleus | 31.67 | 38.15 |
| Solyc06g053610.2.1 | Tomato | nucleus | 33.67 | 38.11 |
| EES12768 | Sorghum | nucleus | 47.67 | 38.03 |
| TraesCS2B01G466500.1 | Wheat | nucleus | 45.67 | 37.95 |
| TraesCS2D01G444300.1 | Wheat | nucleus | 45.67 | 37.74 |
| TraesCS2B01G466400.1 | Wheat | nucleus | 44.33 | 37.46 |
| Bra022831.1-P | Field mustard | nucleus | 30.67 | 37.4 |
| TraesCS2A01G445500.1 | Wheat | nucleus | 45.67 | 37.33 |
| KRH56061 | Soybean | nucleus | 30.0 | 37.19 |
| Zm00001d026203_P001 | Maize | nucleus | 47.33 | 37.17 |
| KRH32183 | Soybean | nucleus | 29.33 | 37.13 |
| VIT_07s0005g03340.t01 | Wine grape | nucleus | 32.67 | 36.43 |
| Bra018267.1-P | Field mustard | nucleus | 30.67 | 36.36 |
| KRH56060 | Soybean | nucleus | 27.67 | 36.09 |
| Solyc12g005640.1.1 | Tomato | nucleus | 28.0 | 36.05 |
| KRG92419 | Soybean | nucleus | 32.67 | 36.03 |
| KRH34387 | Soybean | nucleus | 33.0 | 36.0 |
| KRH56056 | Soybean | nucleus | 28.0 | 35.74 |
| EES05685 | Sorghum | nucleus | 46.0 | 35.57 |
| PGSC0003DMT400067321 | Potato | nucleus | 29.0 | 35.51 |
| PGSC0003DMT400067322 | Potato | nucleus | 29.0 | 35.51 |
| PGSC0003DMT400035748 | Potato | nucleus | 27.33 | 35.5 |
| KRH25458 | Soybean | nucleus | 27.67 | 35.47 |
| KRH25468 | Soybean | nucleus | 27.67 | 35.47 |
| Solyc07g053230.2.1 | Tomato | nucleus | 29.67 | 35.46 |
| PGSC0003DMT400067318 | Potato | nucleus | 28.67 | 35.39 |
| Solyc07g053240.2.1 | Tomato | nucleus | 29.33 | 35.34 |
| Solyc07g054960.1.1 | Tomato | nucleus | 25.0 | 34.72 |
| Solyc07g055000.1.1 | Tomato | nucleus | 28.0 | 34.71 |
| VIT_12s0134g00480.t01 | Wine grape | nucleus | 29.67 | 34.63 |
| Zm00001d002476_P001 | Maize | nucleus | 46.67 | 34.57 |
| PGSC0003DMT400097096 | Potato | nucleus | 24.33 | 34.27 |
| VIT_12s0134g00490.t01 | Wine grape | nucleus | 28.67 | 34.13 |
| KRG95664 | Soybean | nucleus | 33.0 | 34.02 |
| PGSC0003DMT400097604 | Potato | nucleus | 23.67 | 33.81 |
| KRH67378 | Soybean | nucleus | 33.0 | 33.67 |
| VIT_00s0203g00170.t01 | Wine grape | nucleus | 29.67 | 33.21 |
| GSMUA_Achr5P18600_001 | Banana | nucleus | 36.33 | 32.73 |
| GSMUA_Achr11P... | Banana | nucleus | 33.0 | 32.67 |
| Solyc03g093940.1.1 | Tomato | nucleus | 23.33 | 32.26 |
| PGSC0003DMT400039029 | Potato | nucleus | 26.0 | 32.1 |
| KRH26874 | Soybean | nucleus | 26.67 | 31.87 |
| HORVU6Hr1G067380.1 | Barley | nucleus | 45.67 | 31.07 |
| Solyc06g033870.1.1 | Tomato | nucleus | 25.0 | 30.36 |
| Solyc06g034000.1.1 | Tomato | nucleus | 23.67 | 30.08 |
| KRH56059 | Soybean | nucleus | 32.0 | 29.63 |
| PGSC0003DMT400093355 | Potato | nucleus | 23.67 | 29.46 |
| PGSC0003DMT400070912 | Potato | nucleus | 25.33 | 29.23 |
| KRH25461 | Soybean | nucleus | 29.67 | 29.18 |
| PGSC0003DMT400051513 | Potato | nucleus | 24.0 | 29.15 |
| PGSC0003DMT400051510 | Potato | nucleus | 23.33 | 28.81 |
| KRH56058 | Soybean | nucleus | 30.33 | 28.62 |
| Solyc03g093890.2.1 | Tomato | nucleus | 24.0 | 28.46 |
| KRH26875 | Soybean | nucleus | 29.67 | 28.43 |
| Solyc03g093930.2.1 | Tomato | nucleus | 23.0 | 28.16 |
| PGSC0003DMT400021498 | Potato | nucleus | 22.0 | 27.5 |
| KRH25459 | Soybean | nucleus | 27.0 | 26.91 |
| PGSC0003DMT400086165 | Potato | nucleus | 24.67 | 25.78 |
| PGSC0003DMT400021503 | Potato | nucleus | 14.0 | 21.88 |
| PGSC0003DMT400021501 | Potato | nucleus | 14.33 | 21.83 |
| Solyc07g054980.1.1 | Tomato | nucleus | 31.0 | 19.87 |
| CDX73801 | Canola | nucleus | 1.33 | 5.97 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr4P27350_001 | EnsemblPlants:GSMUA_Achr4T27350_001 | EnsemblPlantsGene:GSMUA_Achr4G27350_001 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb |
| ncoils:Coil | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF462 | PFAM:PF00249 | PFscan:PS51294 | SEG:seg |
| SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI000295F083 | UniProt:M0SSJ7 | MapMan:15.5.2.1 | : |
Description
Putative Myb-related protein Zm1 [Source:GMGC_GENE;Acc:GSMUA_Achr4G27350_001]
Coordinates
chr4:+:26219201..26220292
Molecular Weight (calculated)
33765.3 Da
IEP (calculated)
4.475
GRAVY (calculated)
-0.770
Length
300 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRRGRAPCC DKVGLNKGSW SLEEDMRLIA YIEKHGHGNW RALPKLAGLL RCGKSCRLRW INYLRPDIKR GNFTKEEEDA IIELHRLLGN KWSKIASCLP
101: GRTDNEIKNM WNTHLKKRLA SRERKSLATQ KPEDSQSSSS SSASRSCSDH GESKSDEEGN EDPSLYFTDL SVEMIEAPIG PDMDMWGVAE YDTHQEEAAV
201: IVPEFLSMME GGDYSSLIVS TGEEAMEEEE EAKGEGKSSE WVEYLEKELG LCGASEENDS INQESLMRDA AEQQMEMEEE DPVSSYFHKD LVSTCPFGSC
101: GRTDNEIKNM WNTHLKKRLA SRERKSLATQ KPEDSQSSSS SSASRSCSDH GESKSDEEGN EDPSLYFTDL SVEMIEAPIG PDMDMWGVAE YDTHQEEAAV
201: IVPEFLSMME GGDYSSLIVS TGEEAMEEEE EAKGEGKSSE WVEYLEKELG LCGASEENDS INQESLMRDA AEQQMEMEEE DPVSSYFHKD LVSTCPFGSC
001: MGKGRAPCCD KNKVKRGPWS PQEDLTLITF IQKHGHQNWR SLPKLAGLLR CGKSCRLRWI NYLRPDVKRG NFSKKEEDAI IHYHQTLGNK WSKIASFLPG
101: RTDNEIKNVW NTHLKKRLTP SSSSSSLSST HDQSTKADHD KNCDGAQEEI HSGLNESQNS ATSSHHQGEC MHTKPELHEV NGLNEIQFLL DHDDFDDITS
201: EFLQDNDILF PLDSLLHNHQ THISTQEMTR EVTKSQSFDH PQPDIPCGFE DTNEESDLRR QLVESTTPNN EYDEWFNFID NQTYFDDFNF VGEVCL
101: RTDNEIKNVW NTHLKKRLTP SSSSSSLSST HDQSTKADHD KNCDGAQEEI HSGLNESQNS ATSSHHQGEC MHTKPELHEV NGLNEIQFLL DHDDFDDITS
201: EFLQDNDILF PLDSLLHNHQ THISTQEMTR EVTKSQSFDH PQPDIPCGFE DTNEESDLRR QLVESTTPNN EYDEWFNFID NQTYFDDFNF VGEVCL
Arabidopsis Description
ATMYB72MYB72 [Source:UniProtKB/TrEMBL;Acc:A0A178W4I7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.