Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- vacuole 3
- cytosol 4
- plasma membrane 3
- extracellular 2
- endoplasmic reticulum 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr1P04700_001 | Banana | cytosol | 92.57 | 92.57 |
| GSMUA_Achr6P24410_001 | Banana | cytosol | 91.22 | 90.6 |
| GSMUA_Achr5P09010_001 | Banana | cytosol | 85.14 | 85.14 |
| GSMUA_Achr7P01390_001 | Banana | cytosol | 80.41 | 80.41 |
| Solyc06g053930.2.1 | Tomato | cytosol | 80.41 | 79.87 |
| PGSC0003DMT400042062 | Potato | cytosol | 79.73 | 78.67 |
| GSMUA_Achr2P12680_001 | Banana | cytosol | 78.38 | 78.38 |
| GSMUA_Achr4P22570_001 | Banana | cytosol | 78.38 | 78.38 |
| KRH34350 | Soybean | cytosol | 79.05 | 78.0 |
| VIT_05s0020g04420.t01 | Wine grape | cytosol | 78.38 | 77.85 |
| KRH69070 | Soybean | cytosol | 78.38 | 77.33 |
| KRG92449 | Soybean | cytosol | 78.38 | 77.33 |
| KRH31638 | Soybean | cytosol | 78.38 | 77.33 |
| Bra001892.1-P | Field mustard | cytosol | 77.7 | 74.68 |
| CDX92965 | Canola | cytosol | 77.7 | 74.68 |
| CDY34215 | Canola | cytosol | 78.38 | 74.36 |
| Bra023786.1-P | Field mustard | cytosol | 78.38 | 74.36 |
| GSMUA_Achr3P25040_001 | Banana | cytosol | 74.32 | 73.83 |
| GSMUA_Achr3P09330_001 | Banana | cytosol | 74.32 | 73.83 |
| GSMUA_Achr6P23670_001 | Banana | cytosol | 74.32 | 73.83 |
| GSMUA_Achr10P... | Banana | cytosol, plasma membrane | 74.32 | 73.83 |
| GSMUA_Achr5P07820_001 | Banana | cytosol | 74.32 | 73.83 |
| GSMUA_Achr2P01120_001 | Banana | cytosol | 74.32 | 73.83 |
| GSMUA_Achr10P... | Banana | cytosol | 74.32 | 73.83 |
| CDY10686 | Canola | cytosol | 77.03 | 73.55 |
| Bra033898.1-P | Field mustard | cytosol | 77.03 | 73.55 |
| AT4G14640.1 | Thale cress | cytosol | 75.0 | 73.51 |
| GSMUA_Achr9P17280_001 | Banana | cytosol | 73.65 | 73.15 |
| GSMUA_Achr6P15990_001 | Banana | cytosol | 73.65 | 73.15 |
| CDX94883 | Canola | cytosol | 54.73 | 72.97 |
| KRH68729 | Soybean | cytosol | 72.97 | 72.48 |
| GSMUA_Achr5P27590_001 | Banana | cytosol | 56.76 | 72.41 |
| VIT_14s0030g02150.t01 | Wine grape | cytosol | 74.32 | 71.9 |
| KRG96966 | Soybean | cytosol | 71.62 | 71.14 |
| KRH67274 | Soybean | cytosol | 70.95 | 70.95 |
| CDY10325 | Canola | cytosol | 54.05 | 70.8 |
| GSMUA_AchrUn_... | Banana | cytosol | 69.59 | 70.07 |
| GSMUA_Achr11P... | Banana | cytosol | 47.97 | 69.61 |
| GSMUA_Achr7P07720_001 | Banana | cytosol | 68.92 | 68.92 |
| CDY06478 | Canola | cytosol | 69.59 | 68.21 |
| Bra039723.1-P | Field mustard | cytosol | 70.27 | 67.97 |
| KRG95596 | Soybean | cytosol | 66.89 | 66.89 |
| AT3G22930.1 | Thale cress | cytosol | 77.7 | 66.47 |
| VIT_00s0179g00280.t01 | Wine grape | cytosol | 66.22 | 65.77 |
| PGSC0003DMT400034833 | Potato | cytosol | 66.89 | 64.71 |
| CDY40824 | Canola | cytosol | 78.38 | 64.44 |
| KRG92667 | Soybean | cytosol | 64.86 | 64.43 |
| Solyc03g005240.1.1 | Tomato | cytosol | 66.22 | 64.05 |
| KRH34082 | Soybean | cytosol | 64.19 | 63.76 |
| KRG94637 | Soybean | cytosol | 47.3 | 61.4 |
| Solyc01g105630.2.1 | Tomato | cytosol | 60.14 | 60.54 |
| PGSC0003DMT400083727 | Potato | cytosol | 58.11 | 58.5 |
| KRH71363 | Soybean | cytosol | 55.41 | 55.03 |
| KRH32074 | Soybean | cytosol | 54.05 | 53.69 |
| GSMUA_Achr3P25390_001 | Banana | cytosol | 62.16 | 50.27 |
| GSMUA_Achr10P... | Banana | cytosol | 62.84 | 49.47 |
| GSMUA_Achr10P... | Banana | cytosol | 61.49 | 48.15 |
| GSMUA_Achr1P14070_001 | Banana | cytosol | 72.3 | 47.35 |
| GSMUA_Achr6P10140_001 | Banana | cytosol | 40.54 | 36.81 |
| GSMUA_Achr9P21860_001 | Banana | cytosol, mitochondrion | 39.19 | 35.58 |
| GSMUA_Achr3P26750_001 | Banana | cytosol, plasma membrane | 35.14 | 35.14 |
| GSMUA_Achr1P25220_001 | Banana | cytosol | 38.51 | 34.97 |
| GSMUA_Achr8P29750_001 | Banana | cytosol, mitochondrion | 38.51 | 34.76 |
| GSMUA_Achr8P05790_001 | Banana | cytosol | 37.16 | 22.45 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr1P27230_001 | EnsemblPlants:GSMUA_Achr1T27230_001 | EnsemblPlantsGene:GSMUA_Achr1G27230_001 | Gene3D:1.10.238.10 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005509 | InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | InterPro:IPR002048 | PANTHER:PTHR23050 |
| PANTHER:PTHR23050:SF336 | PFAM:PF13499 | PFscan:PS50222 | ScanProsite:PS00018 | SMART:SM00054 | SUPFAM:SSF47473 |
| UniParc:UPI000296A8EE | UniProt:M0S3I0 | MapMan:35.1 | : | : | : |
Description
Calmodulin-like protein 11 [Source:GMGC_GENE;Acc:GSMUA_Achr1G27230_001]
Coordinates
chr1:-:23870339..23871829
Molecular Weight (calculated)
16790.8 Da
IEP (calculated)
3.757
GRAVY (calculated)
-0.344
Length
148 amino acids
Sequence
(BLAST)
(BLAST)
001: MNFLSVDQIS EFQEAFCLFD KDGDGCITID ELATVIGSLG QNPTEEELKD MIMEVDINGN GTIEFTEFLN LMARKMKETD AEEELREAFK VFDKDQNGYI
101: SASELRNVML NLGEKITDEE VLQMIKEADT DGDGQVNFEE FSRMMMAV
101: SASELRNVML NLGEKITDEE VLQMIKEADT DGDGQVNFEE FSRMMMAV
001: MADQLTDDQI SEFKEAFSLF DKDGDGCITT KELGTVMRSL GQNPTEAELQ DMINEVDADG NGTIDFPEFL NLMARKMKDT DSEEELKEAF RVFDKDQNGF
101: ISAAELRHVM TNLGEKLTDE EVDEMIKEAD VDGDGQINYE EFVKVMMAK
101: ISAAELRHVM TNLGEKLTDE EVDEMIKEAD VDGDGQINYE EFVKVMMAK
Arabidopsis Description
CAM5Calmodulin 5 [Source:UniProtKB/TrEMBL;Acc:F4IVN6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.